RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 IGLV2-8P01709 118 aa15.1■□□□□ 0.01
SCN1B-206ENST00000638536 RPL19P84098 196 aaKnown RBP15.1■□□□□ 0.01
SCN1B-206ENST00000638536 OR4C5Q8NGB2 326 aa15.1■□□□□ 0.01
SCN1B-206ENST00000638536 PRO0255Q9UI72 69 aa15.1■□□□□ 0.01
SCN1B-206ENST00000638536 VAX2Q9UIW0 290 aa15.1■□□□□ 0.01
SCN1B-206ENST00000638536 TRGV4A0A0C4DH28 118 aa15.09■□□□□ 0.01
SCN1B-206ENST00000638536 H3BVH4 76 aa15.09■□□□□ 0.01
SCN1B-206ENST00000638536 M0R2N4 97 aa15.09■□□□□ 0.01
SCN1B-206ENST00000638536 S100A4P26447 101 aaKnown RBP15.09■□□□□ 0.01
SCN1B-206ENST00000638536 ASIPP42127 132 aa15.09■□□□□ 0.01
SCN1B-206ENST00000638536 BLOC1S1P78537 153 aa15.09■□□□□ 0.01
SCN1B-206ENST00000638536 ESRGQ1W209 222 aa15.09■□□□□ 0.01
SCN1B-206ENST00000638536 LINC01559Q495D7 138 aa15.09■□□□□ 0.01
SCN1B-206ENST00000638536 DNAH17Q9UFH2 4485 aa15.08■□□□□ 0.01
SCN1B-206ENST00000638536 CENPWQ5EE01 88 aa15.08■□□□□ 0
SCN1B-206ENST00000638536 CFAP126Q5VTH2 177 aa15.08■□□□□ 0
SCN1B-206ENST00000638536 PRR27Q6MZM9 219 aa15.08■□□□□ 0
SCN1B-206ENST00000638536 MED9Q9NWA0 146 aa15.08■□□□□ 0
SCN1B-206ENST00000638536 TRBV20OR9-2A0A075B6H5 130 aa15.07■□□□□ 0
SCN1B-206ENST00000638536 PDE6DO43924 150 aa15.07■□□□□ 0
SCN1B-206ENST00000638536 ARMS2P0C7Q2 107 aa15.07■□□□□ 0
SCN1B-206ENST00000638536 DNLZQ5SXM8 178 aa15.07■□□□□ 0
SCN1B-206ENST00000638536 JPT2Q9H910 190 aa15.07■□□□□ 0
SCN1B-206ENST00000638536 IL36BQ9NZH7 164 aa15.07■□□□□ 0
SCN1B-206ENST00000638536 IGHV3-73A0A0B4J1V6 119 aa15.06■□□□□ 0
SCN1B-206ENST00000638536 RS1O15537 224 aa15.06■□□□□ 0
SCN1B-206ENST00000638536 DMRTA1Q5VZB9 504 aa15.06■□□□□ 0
SCN1B-206ENST00000638536 ZNRF2Q8NHG8 242 aa15.06■□□□□ 0
SCN1B-206ENST00000638536 PCNPQ8WW12 178 aaKnown RBP15.06■□□□□ 0
SCN1B-206ENST00000638536 PTH2Q96A98 100 aa15.06■□□□□ 0
SCN1B-206ENST00000638536 LOC100131303A0A0U1RQF7 123 aa15.05■□□□□ -0
SCN1B-206ENST00000638536 CCL18P55774 89 aa15.05■□□□□ -0
SCN1B-206ENST00000638536 SLAQ13239 276 aa15.04■□□□□ -0
SCN1B-206ENST00000638536 SCRT2Q9NQ03 307 aa15.04■□□□□ -0
SCN1B-206ENST00000638536 RBFOX3A6NFN3 312 aa15.03■□□□□ -0
SCN1B-206ENST00000638536 ICOSQ9Y6W8 199 aa15.03■□□□□ -0
SCN1B-206ENST00000638536 K7EQD1 137 aa15.03■□□□□ -0
SCN1B-206ENST00000638536 GATA1P15976 413 aaPredicted RBP15.03■□□□□ -0
SCN1B-206ENST00000638536 Q6ZSN1 163 aa15.03■□□□□ -0
SCN1B-206ENST00000638536 SAMD10Q9BYL1 202 aa15.03■□□□□ -0
SCN1B-206ENST00000638536 MGST1P10620 155 aaKnown RBP15.02□□□□□ -0.01
SCN1B-206ENST00000638536 GYPEP15421 78 aa15.02□□□□□ -0.01
SCN1B-206ENST00000638536 GNG4P50150 75 aa15.02□□□□□ -0.01
SCN1B-206ENST00000638536 Q6ZR54 194 aa15.02□□□□□ -0.01
SCN1B-206ENST00000638536 HECTD4Q9Y4D8 3996 aa15.01□□□□□ -0.01
SCN1B-206ENST00000638536 TAGLN2P37802 199 aaKnown RBP15.01□□□□□ -0.01
SCN1B-206ENST00000638536 FAM3BP58499 235 aaPredicted RBP15□□□□□ -0.01
SCN1B-206ENST00000638536 TOR2AQ5JU69 321 aa15□□□□□ -0.01
SCN1B-206ENST00000638536 TEX261Q6UWH6 196 aa15□□□□□ -0.01
SCN1B-206ENST00000638536 SLC25A29Q8N8R3 303 aa15□□□□□ -0.01
SCN1B-206ENST00000638536 PARLQ9H300 379 aa15□□□□□ -0.01
SCN1B-206ENST00000638536 C19orf71A6NCJ1 209 aa14.99□□□□□ -0.01
SCN1B-206ENST00000638536 MRPL23Q16540 153 aaKnown RBP14.99□□□□□ -0.01
SCN1B-206ENST00000638536 PHLDA3Q9Y5J5 127 aa14.99□□□□□ -0.01
SCN1B-206ENST00000638536 MUC21A0A0G2JKD1 596 aa14.99□□□□□ -0.01
SCN1B-206ENST00000638536 MUC21A0A140T8X8 626 aa14.99□□□□□ -0.01
SCN1B-206ENST00000638536 M0R381 172 aa14.99□□□□□ -0.01
SCN1B-206ENST00000638536 UFSP1Q6NVU6 142 aa14.99□□□□□ -0.01
SCN1B-206ENST00000638536 GZMBP10144 247 aa14.98□□□□□ -0.01
SCN1B-206ENST00000638536 PIK3CD-AS1Q5SR53 167 aa14.98□□□□□ -0.01
SCN1B-206ENST00000638536 LYPD5Q6UWN5 251 aa14.98□□□□□ -0.01
SCN1B-206ENST00000638536 OR10AG1Q8NH19 301 aa14.98□□□□□ -0.01
SCN1B-206ENST00000638536 Q9H8V8 135 aa14.98□□□□□ -0.01
SCN1B-206ENST00000638536 Q9UF83 564 aa14.98□□□□□ -0.01
SCN1B-206ENST00000638536 A8MWV9 139 aa14.97□□□□□ -0.01
SCN1B-206ENST00000638536 OCC1Q8TAD7 63 aa14.97□□□□□ -0.01
SCN1B-206ENST00000638536 MRPS16Q9Y3D3 137 aaKnown RBP14.97□□□□□ -0.01
SCN1B-206ENST00000638536 K7EN84 100 aa14.96□□□□□ -0.01
SCN1B-206ENST00000638536 NEGR1Q7Z3B1 354 aa14.96□□□□□ -0.01
SCN1B-206ENST00000638536 SMIM12Q96EX1 92 aa14.96□□□□□ -0.01
SCN1B-206ENST00000638536 FAM210AQ96ND0 272 aa14.96□□□□□ -0.01
SCN1B-206ENST00000638536 UPK3BQ9BT76 320 aa14.96□□□□□ -0.01
SCN1B-206ENST00000638536 BIRC6Q9NR09 4857 aa14.96□□□□□ -0.01
SCN1B-206ENST00000638536 TMEM250H0YL14 139 aa14.95□□□□□ -0.02
SCN1B-206ENST00000638536 CXCL1P09341 107 aa14.95□□□□□ -0.02
SCN1B-206ENST00000638536 SRIP30626 198 aa14.95□□□□□ -0.02
SCN1B-206ENST00000638536 SYT8Q8NBV8 401 aa14.95□□□□□ -0.02
SCN1B-206ENST00000638536 SSBP4Q9BWG4 385 aaPredicted RBP14.95□□□□□ -0.02
SCN1B-206ENST00000638536 KRTAP1-5Q9BYS1 174 aa14.95□□□□□ -0.02
SCN1B-206ENST00000638536 EIF5A2Q9GZV4 153 aaKnown RBP14.95□□□□□ -0.02
SCN1B-206ENST00000638536 A0A087WWL8 130 aa14.95□□□□□ -0.02
SCN1B-206ENST00000638536 NBDYA0A0U1RRE5 68 aa14.95□□□□□ -0.02
SCN1B-206ENST00000638536 TRBV6-4A0A1B0GX49 114 aa14.95□□□□□ -0.02
SCN1B-206ENST00000638536 RTL8CO15255 209 aa14.95□□□□□ -0.02
SCN1B-206ENST00000638536 SNAI2O43623 268 aa14.95□□□□□ -0.02
SCN1B-206ENST00000638536 MED14OSP0DP75 135 aa14.95□□□□□ -0.02
SCN1B-206ENST00000638536 CEBPGP53567 150 aa14.95□□□□□ -0.02
SCN1B-206ENST00000638536 SFRP2Q96HF1 295 aa14.95□□□□□ -0.02
SCN1B-206ENST00000638536 PKD1P98161 4303 aa14.94□□□□□ -0.02
SCN1B-206ENST00000638536 CIDEAO60543 219 aa14.94□□□□□ -0.02
SCN1B-206ENST00000638536 CRYGDP07320 174 aa14.94□□□□□ -0.02
SCN1B-206ENST00000638536 SSTP61278 116 aa14.94□□□□□ -0.02
SCN1B-206ENST00000638536 ZFP2Q6ZN57 461 aa14.94□□□□□ -0.02
SCN1B-206ENST00000638536 OR2D3Q8NGH3 330 aa14.94□□□□□ -0.02
SCN1B-206ENST00000638536 FAM74A4Q5TZK3 123 aa14.93□□□□□ -0.02
SCN1B-206ENST00000638536 ZFP82Q8N141 532 aa14.93□□□□□ -0.02
SCN1B-206ENST00000638536 C14orf178Q8N769 122 aaPredicted RBP14.93□□□□□ -0.02
SCN1B-206ENST00000638536 NUDT10Q8NFP7 164 aa14.93□□□□□ -0.02
SCN1B-206ENST00000638536 DAZAP1Q96EP5 407 aaKnown RBP14.93□□□□□ -0.02
SCN1B-206ENST00000638536 NUDT11Q96G61 164 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms