RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 IGLV2-8P01709 118 aa15.1■□□□□ 0.01
SCN1B-206ENST00000638536 RPL19P84098 196 aaKnown RBP15.1■□□□□ 0.01
SCN1B-206ENST00000638536 OR4C5Q8NGB2 326 aa15.1■□□□□ 0.01
SCN1B-206ENST00000638536 PRO0255Q9UI72 69 aa15.1■□□□□ 0.01
SCN1B-206ENST00000638536 VAX2Q9UIW0 290 aa15.1■□□□□ 0.01
SCN1B-206ENST00000638536 TRGV4A0A0C4DH28 118 aa15.09■□□□□ 0.01
SCN1B-206ENST00000638536 H3BVH4 76 aa15.09■□□□□ 0.01
SCN1B-206ENST00000638536 M0R2N4 97 aa15.09■□□□□ 0.01
SCN1B-206ENST00000638536 S100A4P26447 101 aaKnown RBP15.09■□□□□ 0.01
SCN1B-206ENST00000638536 ASIPP42127 132 aa15.09■□□□□ 0.01
SCN1B-206ENST00000638536 BLOC1S1P78537 153 aa15.09■□□□□ 0.01
SCN1B-206ENST00000638536 ESRGQ1W209 222 aa15.09■□□□□ 0.01
SCN1B-206ENST00000638536 LINC01559Q495D7 138 aa15.09■□□□□ 0.01
SCN1B-206ENST00000638536 DNAH17Q9UFH2 4485 aa15.08■□□□□ 0.01
SCN1B-206ENST00000638536 CENPWQ5EE01 88 aa15.08■□□□□ 0
SCN1B-206ENST00000638536 CFAP126Q5VTH2 177 aa15.08■□□□□ 0
SCN1B-206ENST00000638536 PRR27Q6MZM9 219 aa15.08■□□□□ 0
SCN1B-206ENST00000638536 MED9Q9NWA0 146 aa15.08■□□□□ 0
SCN1B-206ENST00000638536 TRBV20OR9-2A0A075B6H5 130 aa15.07■□□□□ 0
SCN1B-206ENST00000638536 PDE6DO43924 150 aa15.07■□□□□ 0
SCN1B-206ENST00000638536 ARMS2P0C7Q2 107 aa15.07■□□□□ 0
SCN1B-206ENST00000638536 DNLZQ5SXM8 178 aa15.07■□□□□ 0
SCN1B-206ENST00000638536 JPT2Q9H910 190 aa15.07■□□□□ 0
SCN1B-206ENST00000638536 IL36BQ9NZH7 164 aa15.07■□□□□ 0
SCN1B-206ENST00000638536 IGHV3-73A0A0B4J1V6 119 aa15.06■□□□□ 0
SCN1B-206ENST00000638536 RS1O15537 224 aa15.06■□□□□ 0
SCN1B-206ENST00000638536 DMRTA1Q5VZB9 504 aa15.06■□□□□ 0
SCN1B-206ENST00000638536 ZNRF2Q8NHG8 242 aa15.06■□□□□ 0
SCN1B-206ENST00000638536 PCNPQ8WW12 178 aaKnown RBP15.06■□□□□ 0
SCN1B-206ENST00000638536 PTH2Q96A98 100 aa15.06■□□□□ 0
SCN1B-206ENST00000638536 LOC100131303A0A0U1RQF7 123 aa15.05■□□□□ -0
SCN1B-206ENST00000638536 CCL18P55774 89 aa15.05■□□□□ -0
SCN1B-206ENST00000638536 SLAQ13239 276 aa15.04■□□□□ -0
SCN1B-206ENST00000638536 SCRT2Q9NQ03 307 aa15.04■□□□□ -0
SCN1B-206ENST00000638536 RBFOX3A6NFN3 312 aa15.03■□□□□ -0
SCN1B-206ENST00000638536 ICOSQ9Y6W8 199 aa15.03■□□□□ -0
SCN1B-206ENST00000638536 K7EQD1 137 aa15.03■□□□□ -0
SCN1B-206ENST00000638536 GATA1P15976 413 aaPredicted RBP15.03■□□□□ -0
SCN1B-206ENST00000638536 Q6ZSN1 163 aa15.03■□□□□ -0
SCN1B-206ENST00000638536 SAMD10Q9BYL1 202 aa15.03■□□□□ -0
SCN1B-206ENST00000638536 MGST1P10620 155 aaKnown RBP15.02□□□□□ -0.01
SCN1B-206ENST00000638536 GYPEP15421 78 aa15.02□□□□□ -0.01
SCN1B-206ENST00000638536 GNG4P50150 75 aa15.02□□□□□ -0.01
SCN1B-206ENST00000638536 Q6ZR54 194 aa15.02□□□□□ -0.01
SCN1B-206ENST00000638536 HECTD4Q9Y4D8 3996 aa15.01□□□□□ -0.01
SCN1B-206ENST00000638536 TAGLN2P37802 199 aaKnown RBP15.01□□□□□ -0.01
SCN1B-206ENST00000638536 FAM3BP58499 235 aaPredicted RBP15□□□□□ -0.01
SCN1B-206ENST00000638536 TOR2AQ5JU69 321 aa15□□□□□ -0.01
SCN1B-206ENST00000638536 TEX261Q6UWH6 196 aa15□□□□□ -0.01
SCN1B-206ENST00000638536 SLC25A29Q8N8R3 303 aa15□□□□□ -0.01
SCN1B-206ENST00000638536 PARLQ9H300 379 aa15□□□□□ -0.01
SCN1B-206ENST00000638536 C19orf71A6NCJ1 209 aa14.99□□□□□ -0.01
SCN1B-206ENST00000638536 MRPL23Q16540 153 aaKnown RBP14.99□□□□□ -0.01
SCN1B-206ENST00000638536 PHLDA3Q9Y5J5 127 aa14.99□□□□□ -0.01
SCN1B-206ENST00000638536 MUC21A0A0G2JKD1 596 aa14.99□□□□□ -0.01
SCN1B-206ENST00000638536 MUC21A0A140T8X8 626 aa14.99□□□□□ -0.01
SCN1B-206ENST00000638536 M0R381 172 aa14.99□□□□□ -0.01
SCN1B-206ENST00000638536 UFSP1Q6NVU6 142 aa14.99□□□□□ -0.01
SCN1B-206ENST00000638536 GZMBP10144 247 aa14.98□□□□□ -0.01
SCN1B-206ENST00000638536 PIK3CD-AS1Q5SR53 167 aa14.98□□□□□ -0.01
SCN1B-206ENST00000638536 LYPD5Q6UWN5 251 aa14.98□□□□□ -0.01
SCN1B-206ENST00000638536 OR10AG1Q8NH19 301 aa14.98□□□□□ -0.01
SCN1B-206ENST00000638536 Q9H8V8 135 aa14.98□□□□□ -0.01
SCN1B-206ENST00000638536 Q9UF83 564 aa14.98□□□□□ -0.01
SCN1B-206ENST00000638536 A8MWV9 139 aa14.97□□□□□ -0.01
SCN1B-206ENST00000638536 OCC1Q8TAD7 63 aa14.97□□□□□ -0.01
SCN1B-206ENST00000638536 MRPS16Q9Y3D3 137 aaKnown RBP14.97□□□□□ -0.01
SCN1B-206ENST00000638536 K7EN84 100 aa14.96□□□□□ -0.01
SCN1B-206ENST00000638536 NEGR1Q7Z3B1 354 aa14.96□□□□□ -0.01
SCN1B-206ENST00000638536 SMIM12Q96EX1 92 aa14.96□□□□□ -0.01
SCN1B-206ENST00000638536 FAM210AQ96ND0 272 aa14.96□□□□□ -0.01
SCN1B-206ENST00000638536 UPK3BQ9BT76 320 aa14.96□□□□□ -0.01
SCN1B-206ENST00000638536 BIRC6Q9NR09 4857 aa14.96□□□□□ -0.01
SCN1B-206ENST00000638536 TMEM250H0YL14 139 aa14.95□□□□□ -0.02
SCN1B-206ENST00000638536 CXCL1P09341 107 aa14.95□□□□□ -0.02
SCN1B-206ENST00000638536 SRIP30626 198 aa14.95□□□□□ -0.02
SCN1B-206ENST00000638536 SYT8Q8NBV8 401 aa14.95□□□□□ -0.02
SCN1B-206ENST00000638536 SSBP4Q9BWG4 385 aaPredicted RBP14.95□□□□□ -0.02
SCN1B-206ENST00000638536 KRTAP1-5Q9BYS1 174 aa14.95□□□□□ -0.02
SCN1B-206ENST00000638536 EIF5A2Q9GZV4 153 aaKnown RBP14.95□□□□□ -0.02
SCN1B-206ENST00000638536 A0A087WWL8 130 aa14.95□□□□□ -0.02
SCN1B-206ENST00000638536 NBDYA0A0U1RRE5 68 aa14.95□□□□□ -0.02
SCN1B-206ENST00000638536 TRBV6-4A0A1B0GX49 114 aa14.95□□□□□ -0.02
SCN1B-206ENST00000638536 RTL8CO15255 209 aa14.95□□□□□ -0.02
SCN1B-206ENST00000638536 SNAI2O43623 268 aa14.95□□□□□ -0.02
SCN1B-206ENST00000638536 MED14OSP0DP75 135 aa14.95□□□□□ -0.02
SCN1B-206ENST00000638536 CEBPGP53567 150 aa14.95□□□□□ -0.02
SCN1B-206ENST00000638536 SFRP2Q96HF1 295 aa14.95□□□□□ -0.02
SCN1B-206ENST00000638536 PKD1P98161 4303 aa14.94□□□□□ -0.02
SCN1B-206ENST00000638536 CIDEAO60543 219 aa14.94□□□□□ -0.02
SCN1B-206ENST00000638536 CRYGDP07320 174 aa14.94□□□□□ -0.02
SCN1B-206ENST00000638536 SSTP61278 116 aa14.94□□□□□ -0.02
SCN1B-206ENST00000638536 ZFP2Q6ZN57 461 aa14.94□□□□□ -0.02
SCN1B-206ENST00000638536 OR2D3Q8NGH3 330 aa14.94□□□□□ -0.02
SCN1B-206ENST00000638536 FAM74A4Q5TZK3 123 aa14.93□□□□□ -0.02
SCN1B-206ENST00000638536 ZFP82Q8N141 532 aa14.93□□□□□ -0.02
SCN1B-206ENST00000638536 C14orf178Q8N769 122 aaPredicted RBP14.93□□□□□ -0.02
SCN1B-206ENST00000638536 NUDT10Q8NFP7 164 aa14.93□□□□□ -0.02
SCN1B-206ENST00000638536 DAZAP1Q96EP5 407 aaKnown RBP14.93□□□□□ -0.02
SCN1B-206ENST00000638536 NUDT11Q96G61 164 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms