RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 BORCS7Q96B45 105 aa9.19□□□□□ -0.94
CTSD-208ENST00000636843 TRAV2A0A0B4J234 112 aa9.18□□□□□ -0.94
CTSD-208ENST00000636843 TRAV8-2A0A0B4J237 113 aa9.18□□□□□ -0.94
CTSD-208ENST00000636843 NUPR1O60356 82 aa9.18□□□□□ -0.94
CTSD-208ENST00000636843 GZMBP10144 247 aa9.18□□□□□ -0.94
CTSD-208ENST00000636843 LINC00310P59036 64 aa9.18□□□□□ -0.94
CTSD-208ENST00000636843 GATD1Q8NB37 220 aa9.18□□□□□ -0.94
CTSD-208ENST00000636843 C16orf92Q96LL3 132 aa9.18□□□□□ -0.94
CTSD-208ENST00000636843 GSN-AS1Q9NRJ2 163 aa9.18□□□□□ -0.94
CTSD-208ENST00000636843 PPP1R14DQ9NXH3 145 aa9.18□□□□□ -0.94
CTSD-208ENST00000636843 DNAH6Q9C0G6 4158 aa9.18□□□□□ -0.94
CTSD-208ENST00000636843 FABP5P3A8MUU1 101 aa9.17□□□□□ -0.94
CTSD-208ENST00000636843 RNF182Q8N6D2 247 aa9.17□□□□□ -0.94
CTSD-208ENST00000636843 KCNS1Q96KK3 526 aa9.17□□□□□ -0.94
CTSD-208ENST00000636843 ALKBH7Q9BT30 221 aaPredicted RBP9.17□□□□□ -0.94
CTSD-208ENST00000636843 MS4A6AQ9H2W1 248 aa9.17□□□□□ -0.94
CTSD-208ENST00000636843 VPS13DQ5THJ4 4388 aa9.17□□□□□ -0.94
CTSD-208ENST00000636843 PRAC2D3DTV9 90 aa9.16□□□□□ -0.94
CTSD-208ENST00000636843 DEFB131AP59861 70 aa9.16□□□□□ -0.94
CTSD-208ENST00000636843 TMEM78Q5T7P6 136 aa9.16□□□□□ -0.94
CTSD-208ENST00000636843 C9orf47Q6ZRZ4 202 aa9.16□□□□□ -0.94
CTSD-208ENST00000636843 Q8TAT8 98 aa9.16□□□□□ -0.94
CTSD-208ENST00000636843 C18orf32Q8TCD1 76 aa9.16□□□□□ -0.94
CTSD-208ENST00000636843 SSBP4Q9BWG4 385 aaPredicted RBP9.16□□□□□ -0.94
CTSD-208ENST00000636843 SAMD10Q9BYL1 202 aa9.16□□□□□ -0.94
CTSD-208ENST00000636843 LENEPQ9Y5L5 61 aa9.16□□□□□ -0.94
CTSD-208ENST00000636843 F2Z2F3 143 aa9.15□□□□□ -0.94
CTSD-208ENST00000636843 PRB4P10163 310 aaPredicted RBP9.15□□□□□ -0.94
CTSD-208ENST00000636843 ZNF138P52744 262 aa9.15□□□□□ -0.94
CTSD-208ENST00000636843 RPL11P62913 178 aaKnown RBP9.15□□□□□ -0.94
CTSD-208ENST00000636843 ERCC8Q13216 396 aa9.15□□□□□ -0.94
CTSD-208ENST00000636843 IQCJQ1A5X6 159 aa9.15□□□□□ -0.94
CTSD-208ENST00000636843 SAMD13Q5VXD3 122 aa9.15□□□□□ -0.94
CTSD-208ENST00000636843 STHQ8IWL8 128 aa9.15□□□□□ -0.94
CTSD-208ENST00000636843 KRTAP17-1Q9BYP8 105 aa9.15□□□□□ -0.94
CTSD-208ENST00000636843 GPX1P07203 203 aa9.15□□□□□ -0.95
CTSD-208ENST00000636843 ARMS2P0C7Q2 107 aa9.15□□□□□ -0.95
CTSD-208ENST00000636843 HIST1H1AQ02539 215 aaPredicted RBP9.15□□□□□ -0.95
CTSD-208ENST00000636843 DMRTA1Q5VZB9 504 aa9.15□□□□□ -0.95
CTSD-208ENST00000636843 AGPAT4-IT1Q9H0P7 198 aa9.15□□□□□ -0.95
CTSD-208ENST00000636843 NRN1Q9NPD7 142 aa9.15□□□□□ -0.95
CTSD-208ENST00000636843 SOCS3O14543 225 aa9.14□□□□□ -0.95
CTSD-208ENST00000636843 DEFB4AO15263 64 aa9.14□□□□□ -0.95
CTSD-208ENST00000636843 ZNF324O75467 553 aaPredicted RBP9.14□□□□□ -0.95
CTSD-208ENST00000636843 ZNF80P51504 273 aaPredicted RBP9.14□□□□□ -0.95
CTSD-208ENST00000636843 LINC01559Q495D7 138 aa9.14□□□□□ -0.95
CTSD-208ENST00000636843 CDPF1Q6NVV7 123 aa9.14□□□□□ -0.95
CTSD-208ENST00000636843 ZNF493Q6ZR52 646 aa9.14□□□□□ -0.95
CTSD-208ENST00000636843 ZNF738Q8NE65 137 aa9.14□□□□□ -0.95
CTSD-208ENST00000636843 LINC00477Q96M19 166 aa9.14□□□□□ -0.95
CTSD-208ENST00000636843 CTRLP40313 264 aa9.13□□□□□ -0.95
CTSD-208ENST00000636843 MORN3Q6PF18 240 aaPredicted RBP9.13□□□□□ -0.95
CTSD-208ENST00000636843 LYZL1Q6UWQ5 148 aa9.13□□□□□ -0.95
CTSD-208ENST00000636843 FER1L6-AS1Q8NA97 138 aa9.13□□□□□ -0.95
CTSD-208ENST00000636843 Q8NAQ8 132 aa9.13□□□□□ -0.95
CTSD-208ENST00000636843 HERC2O95714 4834 aa9.13□□□□□ -0.95
CTSD-208ENST00000636843 HECTD4Q9Y4D8 3996 aa9.12□□□□□ -0.95
CTSD-208ENST00000636843 IGLL5B9A064 214 aa9.12□□□□□ -0.95
CTSD-208ENST00000636843 ORM1P02763 201 aa9.12□□□□□ -0.95
CTSD-208ENST00000636843 IGLC6P0CF74 106 aa9.12□□□□□ -0.95
CTSD-208ENST00000636843 AMTP48728 403 aa9.12□□□□□ -0.95
CTSD-208ENST00000636843 PKIAP61925 76 aa9.12□□□□□ -0.95
CTSD-208ENST00000636843 TRPT1Q86TN4 253 aaKnown RBP9.12□□□□□ -0.95
CTSD-208ENST00000636843 OR10J6PQ8NGY7 276 aa9.12□□□□□ -0.95
CTSD-208ENST00000636843 TPPP3Q9BW30 176 aa9.12□□□□□ -0.95
CTSD-208ENST00000636843 APLNQ9ULZ1 77 aa9.12□□□□□ -0.95
CTSD-208ENST00000636843 TMSB15BA0A087X1C1 80 aa9.11□□□□□ -0.95
CTSD-208ENST00000636843 K7EQG2 157 aa9.11□□□□□ -0.95
CTSD-208ENST00000636843 SCGB1D1O95968 90 aa9.11□□□□□ -0.95
CTSD-208ENST00000636843 GIG44P09565 113 aaPredicted RBP9.11□□□□□ -0.95
CTSD-208ENST00000636843 MIFP14174 115 aa9.11□□□□□ -0.95
CTSD-208ENST00000636843 CHCHD1Q96BP2 118 aaKnown RBP9.11□□□□□ -0.95
CTSD-208ENST00000636843 C20orf173Q96LM9 149 aa9.11□□□□□ -0.95
CTSD-208ENST00000636843 NAGKQ9UJ70 344 aa9.11□□□□□ -0.95
CTSD-208ENST00000636843 IGHV4-28A0A0C4DH34 117 aa9.1□□□□□ -0.95
CTSD-208ENST00000636843 TRBV7-9A0A0J9YWB2 115 aa9.1□□□□□ -0.95
CTSD-208ENST00000636843 TSTD3H0UI37 97 aa9.1□□□□□ -0.95
CTSD-208ENST00000636843 HSBP1O75506 76 aa9.1□□□□□ -0.95
CTSD-208ENST00000636843 RBMY1A1P0DJD3 496 aaKnown RBP9.1□□□□□ -0.95
CTSD-208ENST00000636843 RBMY1CP0DJD4 496 aa9.1□□□□□ -0.95
CTSD-208ENST00000636843 ID1P41134 155 aa9.1□□□□□ -0.95
CTSD-208ENST00000636843 RBMY1FQ15415 496 aaKnown RBP9.1□□□□□ -0.95
CTSD-208ENST00000636843 CNFNQ9BYD5 112 aa9.1□□□□□ -0.95
CTSD-208ENST00000636843 PMCHP20382 165 aa9.1□□□□□ -0.95
CTSD-208ENST00000636843 NIT1Q86X76 327 aa9.1□□□□□ -0.95
CTSD-208ENST00000636843 TRAV10A0A0B4J240 114 aa9.09□□□□□ -0.95
CTSD-208ENST00000636843 KNCNA6PVL3 124 aa9.09□□□□□ -0.95
CTSD-208ENST00000636843 ZNF688P0C7X2 276 aa9.09□□□□□ -0.95
CTSD-208ENST00000636843 RAB4AP20338 218 aa9.09□□□□□ -0.95
CTSD-208ENST00000636843 RNASEKQ6P5S7 137 aaKnown RBP9.09□□□□□ -0.95
CTSD-208ENST00000636843 DCANP1Q8TF63 244 aa9.09□□□□□ -0.95
CTSD-208ENST00000636843 LINC00587B1AMM8 73 aa9.08□□□□□ -0.96
CTSD-208ENST00000636843 NTF3P20783 257 aa9.08□□□□□ -0.96
CTSD-208ENST00000636843 FAM104BQ5XKR9 115 aa9.08□□□□□ -0.96
CTSD-208ENST00000636843 ZNF575Q86XF7 245 aa9.08□□□□□ -0.96
CTSD-208ENST00000636843 OR8A1Q8NGG7 326 aa9.08□□□□□ -0.96
CTSD-208ENST00000636843 X6R8D5 127 aa9.08□□□□□ -0.96
CTSD-208ENST00000636843 AGRNO00468 2067 aa9.07□□□□□ -0.96
CTSD-208ENST00000636843 IGKV3D-20A0A0C4DH25 116 aa9.07□□□□□ -0.96
CTSD-208ENST00000636843 M0R2Z0 102 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 159.4 ms