RNA–Protein interactions for RNA: ENST00000628306.2

CAPNS1-216, Transcript of calpain small subunit 1, humanhuman

TSL 5 BASIC

Gene CAPNS1, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-216ENST00000628306 OR11H2Q8NH07 326 aa17.4■□□□□ 0.38
CAPNS1-216ENST00000628306 A0A1B0GXF2 115 aa17.39■□□□□ 0.37
CAPNS1-216ENST00000628306 H3BMM0 161 aa17.39■□□□□ 0.37
CAPNS1-216ENST00000628306 ORM1P02763 201 aa17.39■□□□□ 0.37
CAPNS1-216ENST00000628306 ACTL10Q5JWF8 245 aa17.39■□□□□ 0.37
CAPNS1-216ENST00000628306 GDF5OSQ5U4N7 250 aa17.39■□□□□ 0.37
CAPNS1-216ENST00000628306 DEFB4AO15263 64 aa17.38■□□□□ 0.37
CAPNS1-216ENST00000628306 AMTNQ6UX39 209 aa17.38■□□□□ 0.37
CAPNS1-216ENST00000628306 F2Z2F3 143 aa17.37■□□□□ 0.37
CAPNS1-216ENST00000628306 IGLC6P0CF74 106 aa17.37■□□□□ 0.37
CAPNS1-216ENST00000628306 TRAPPC1Q9Y5R8 145 aa17.37■□□□□ 0.37
CAPNS1-216ENST00000628306 IGKV3D-20A0A0C4DH25 116 aa17.36■□□□□ 0.37
CAPNS1-216ENST00000628306 S100A8P05109 93 aa17.36■□□□□ 0.37
CAPNS1-216ENST00000628306 CDKN1BP46527 198 aa17.36■□□□□ 0.37
CAPNS1-216ENST00000628306 PRR9Q5T870 116 aa17.36■□□□□ 0.37
CAPNS1-216ENST00000628306 A0A1B0GUT8 65 aa17.35■□□□□ 0.37
CAPNS1-216ENST00000628306 A0A1B0GVY2 172 aa17.35■□□□□ 0.37
CAPNS1-216ENST00000628306 HLA-DQA1P01909 254 aa17.35■□□□□ 0.37
CAPNS1-216ENST00000628306 TCTAP57738 103 aa17.35■□□□□ 0.37
CAPNS1-216ENST00000628306 RIGQ13278 110 aa17.35■□□□□ 0.37
CAPNS1-216ENST00000628306 DNLZQ5SXM8 178 aa17.35■□□□□ 0.37
CAPNS1-216ENST00000628306 TMEM136Q6ZRR5 245 aa17.35■□□□□ 0.37
CAPNS1-216ENST00000628306 PGLYRP4Q96LB8 373 aa17.35■□□□□ 0.37
CAPNS1-216ENST00000628306 CNFNQ9BYD5 112 aa17.35■□□□□ 0.37
CAPNS1-216ENST00000628306 C11orf21Q9P2W6 132 aa17.35■□□□□ 0.37
CAPNS1-216ENST00000628306 GZMBP10144 247 aa17.34■□□□□ 0.37
CAPNS1-216ENST00000628306 RNASE4P34096 147 aaKnown RBP17.34■□□□□ 0.37
CAPNS1-216ENST00000628306 CTRLP40313 264 aa17.34■□□□□ 0.37
CAPNS1-216ENST00000628306 HBBP68871 147 aa17.34■□□□□ 0.37
CAPNS1-216ENST00000628306 Q8NAQ8 132 aa17.34■□□□□ 0.37
CAPNS1-216ENST00000628306 GATD1Q8NB37 220 aa17.34■□□□□ 0.37
CAPNS1-216ENST00000628306 SSBP4Q9BWG4 385 aaPredicted RBP17.34■□□□□ 0.37
CAPNS1-216ENST00000628306 GIG44P09565 113 aaPredicted RBP17.33■□□□□ 0.36
CAPNS1-216ENST00000628306 MRPL54Q6P161 138 aaKnown RBP17.33■□□□□ 0.36
CAPNS1-216ENST00000628306 FER1L6-AS1Q8NA97 138 aa17.33■□□□□ 0.36
CAPNS1-216ENST00000628306 BORCS7Q96B45 105 aa17.33■□□□□ 0.36
CAPNS1-216ENST00000628306 C7orf71A4D174 169 aa17.32■□□□□ 0.36
CAPNS1-216ENST00000628306 ZNF324O75467 553 aaPredicted RBP17.32■□□□□ 0.36
CAPNS1-216ENST00000628306 MED14OSP0DP75 135 aa17.32■□□□□ 0.36
CAPNS1-216ENST00000628306 TDRG1Q3Y452 100 aa17.32■□□□□ 0.36
CAPNS1-216ENST00000628306 FRZBQ92765 325 aa17.32■□□□□ 0.36
CAPNS1-216ENST00000628306 SNURFLB1AK76 121 aa17.31■□□□□ 0.36
CAPNS1-216ENST00000628306 AMBPP02760 352 aa17.31■□□□□ 0.36
CAPNS1-216ENST00000628306 FABP9Q0Z7S8 132 aa17.31■□□□□ 0.36
CAPNS1-216ENST00000628306 KCNS1Q96KK3 526 aa17.31■□□□□ 0.36
CAPNS1-216ENST00000628306 KNCNA6PVL3 124 aa17.3■□□□□ 0.36
CAPNS1-216ENST00000628306 SPINK4O60575 86 aa17.3■□□□□ 0.36
CAPNS1-216ENST00000628306 OR5AL1P0C617 328 aa17.3■□□□□ 0.36
CAPNS1-216ENST00000628306 RBMY1A1P0DJD3 496 aaKnown RBP17.3■□□□□ 0.36
CAPNS1-216ENST00000628306 RBMY1CP0DJD4 496 aa17.3■□□□□ 0.36
CAPNS1-216ENST00000628306 RBMY1FQ15415 496 aaKnown RBP17.3■□□□□ 0.36
CAPNS1-216ENST00000628306 LYZL1Q6UWQ5 148 aa17.3■□□□□ 0.36
CAPNS1-216ENST00000628306 TMSB15BA0A087X1C1 80 aa17.29■□□□□ 0.36
CAPNS1-216ENST00000628306 IGLL5B9A064 214 aa17.29■□□□□ 0.36
CAPNS1-216ENST00000628306 HIST1H2BKO60814 126 aa17.29■□□□□ 0.36
CAPNS1-216ENST00000628306 HIST1H2BJP06899 126 aa17.29■□□□□ 0.36
CAPNS1-216ENST00000628306 TRGC1P0CF51 173 aa17.29■□□□□ 0.36
CAPNS1-216ENST00000628306 HIST1H2BOP23527 126 aa17.29■□□□□ 0.36
CAPNS1-216ENST00000628306 HIST1H2BBP33778 126 aa17.29■□□□□ 0.36
CAPNS1-216ENST00000628306 HIST1H2BDP58876 126 aa17.29■□□□□ 0.36
CAPNS1-216ENST00000628306 HIST1H2BCP62807 126 aa17.29■□□□□ 0.36
CAPNS1-216ENST00000628306 HIST2H2BEQ16778 126 aa17.29■□□□□ 0.36
CAPNS1-216ENST00000628306 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.29■□□□□ 0.36
CAPNS1-216ENST00000628306 HIST1H2BHQ93079 126 aa17.29■□□□□ 0.36
CAPNS1-216ENST00000628306 HIST1H2BNQ99877 126 aa17.29■□□□□ 0.36
CAPNS1-216ENST00000628306 HIST1H2BMQ99879 126 aa17.29■□□□□ 0.36
CAPNS1-216ENST00000628306 C20orf144Q9BQM9 153 aa17.29■□□□□ 0.36
CAPNS1-216ENST00000628306 MRPL18Q9H0U6 180 aaKnown RBP17.29■□□□□ 0.36
CAPNS1-216ENST00000628306 AGRNO00468 2067 aa17.29■□□□□ 0.36
CAPNS1-216ENST00000628306 IGHV4-4A0A075B6R2 117 aa17.28■□□□□ 0.36
CAPNS1-216ENST00000628306 SNAI2O43623 268 aa17.28■□□□□ 0.36
CAPNS1-216ENST00000628306 ZNF493Q6ZR52 646 aa17.28■□□□□ 0.36
CAPNS1-216ENST00000628306 GFI1BQ5VTD9 330 aa17.28■□□□□ 0.36
CAPNS1-216ENST00000628306 ZFP82Q8N141 532 aa17.28■□□□□ 0.36
CAPNS1-216ENST00000628306 ARMS2P0C7Q2 107 aa17.27■□□□□ 0.35
CAPNS1-216ENST00000628306 KIR3DS1Q14943 382 aa17.27■□□□□ 0.35
CAPNS1-216ENST00000628306 ANXA2RQ3ZCQ2 193 aa17.27■□□□□ 0.35
CAPNS1-216ENST00000628306 FAM159AQ6UWV7 190 aa17.27■□□□□ 0.35
CAPNS1-216ENST00000628306 HSPG2P98160 4391 aa17.26■□□□□ 0.35
CAPNS1-216ENST00000628306 GRIFINA4D1Z8 144 aa17.26■□□□□ 0.35
CAPNS1-216ENST00000628306 APCSP02743 223 aa17.26■□□□□ 0.35
CAPNS1-216ENST00000628306 S100A6P06703 90 aa17.26■□□□□ 0.35
CAPNS1-216ENST00000628306 CACNG7P62955 275 aa17.26■□□□□ 0.35
CAPNS1-216ENST00000628306 COA6Q5JTJ3 125 aaKnown RBP17.26■□□□□ 0.35
CAPNS1-216ENST00000628306 TRPT1Q86TN4 253 aaKnown RBP17.26■□□□□ 0.35
CAPNS1-216ENST00000628306 LINC00467Q9BRT7 94 aa17.26■□□□□ 0.35
CAPNS1-216ENST00000628306 MUC4Q99102 2169 aa17.25■□□□□ 0.35
CAPNS1-216ENST00000628306 IGHV4-28A0A0C4DH34 117 aa17.25■□□□□ 0.35
CAPNS1-216ENST00000628306 IGKV3-20P01619 116 aa17.25■□□□□ 0.35
CAPNS1-216ENST00000628306 ASIPP42127 132 aa17.25■□□□□ 0.35
CAPNS1-216ENST00000628306 CAMPP49913 170 aa17.25■□□□□ 0.35
CAPNS1-216ENST00000628306 RAB4BP61018 213 aa17.25■□□□□ 0.35
CAPNS1-216ENST00000628306 SPINK13Q1W4C9 94 aa17.25■□□□□ 0.35
CAPNS1-216ENST00000628306 Q6ZQT7 251 aa17.25■□□□□ 0.35
CAPNS1-216ENST00000628306 LINC00336Q6ZUF6 198 aa17.25■□□□□ 0.35
CAPNS1-216ENST00000628306 STHQ8IWL8 128 aa17.25■□□□□ 0.35
CAPNS1-216ENST00000628306 SCRT2Q9NQ03 307 aa17.25■□□□□ 0.35
CAPNS1-216ENST00000628306 C5orf52A6NGY3 159 aa17.24■□□□□ 0.35
CAPNS1-216ENST00000628306 J3KRW8 73 aa17.24■□□□□ 0.35
CAPNS1-216ENST00000628306 M0R2Z0 102 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms