RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 C1QTNF4Q9BXJ3 329 aa5.54□□□□□ -1.52
PTP4A1-206ENST00000627002 ZMAT5Q9UDW3 170 aaKnown RBP5.54□□□□□ -1.52
PTP4A1-206ENST00000627002 H3BVH4 76 aa5.53□□□□□ -1.52
PTP4A1-206ENST00000627002 GNRH2O43555 120 aa5.53□□□□□ -1.52
PTP4A1-206ENST00000627002 NTF3P20783 257 aa5.53□□□□□ -1.52
PTP4A1-206ENST00000627002 SPANXN1Q5VSR9 72 aa5.53□□□□□ -1.52
PTP4A1-206ENST00000627002 TMEM191AQ9H0A3 160 aa5.53□□□□□ -1.52
PTP4A1-206ENST00000627002 SCRT2Q9NQ03 307 aa5.53□□□□□ -1.52
PTP4A1-206ENST00000627002 PHLDA3Q9Y5J5 127 aa5.53□□□□□ -1.52
PTP4A1-206ENST00000627002 TIMM8BQ9Y5J9 83 aaPredicted RBP5.53□□□□□ -1.52
PTP4A1-206ENST00000627002 IGHV3-16A0A0C4DH30 117 aa5.52□□□□□ -1.53
PTP4A1-206ENST00000627002 MUC21A0A0G2JKD1 596 aa5.52□□□□□ -1.53
PTP4A1-206ENST00000627002 MUC21A0A140T8X8 626 aa5.52□□□□□ -1.53
PTP4A1-206ENST00000627002 CBY3A6NI87 242 aa5.52□□□□□ -1.53
PTP4A1-206ENST00000627002 RNASE3P12724 160 aaKnown RBP5.52□□□□□ -1.53
PTP4A1-206ENST00000627002 NDUFA6P56556 154 aa5.52□□□□□ -1.53
PTP4A1-206ENST00000627002 SLAQ13239 276 aa5.52□□□□□ -1.53
PTP4A1-206ENST00000627002 Q8N1Y9 231 aa5.52□□□□□ -1.53
PTP4A1-206ENST00000627002 DEFB125Q8N687 156 aa5.52□□□□□ -1.53
PTP4A1-206ENST00000627002 SYT8Q8NBV8 401 aa5.52□□□□□ -1.53
PTP4A1-206ENST00000627002 OR10AG1Q8NH19 301 aa5.52□□□□□ -1.53
PTP4A1-206ENST00000627002 C9orf85Q96MD7 179 aa5.52□□□□□ -1.53
PTP4A1-206ENST00000627002 LINC01587Q99440 93 aa5.52□□□□□ -1.53
PTP4A1-206ENST00000627002 WFDC10AQ9H1F0 79 aa5.52□□□□□ -1.53
PTP4A1-206ENST00000627002 GOLT1BQ9Y3E0 138 aa5.52□□□□□ -1.53
PTP4A1-206ENST00000627002 LOC102724200A0A096LPH7 203 aaPredicted RBP5.51□□□□□ -1.53
PTP4A1-206ENST00000627002 C5orf52A6NGY3 159 aa5.51□□□□□ -1.53
PTP4A1-206ENST00000627002 NXPH4O95158 308 aa5.51□□□□□ -1.53
PTP4A1-206ENST00000627002 RBMY1A1P0DJD3 496 aaKnown RBP5.51□□□□□ -1.53
PTP4A1-206ENST00000627002 RBMY1CP0DJD4 496 aa5.51□□□□□ -1.53
PTP4A1-206ENST00000627002 RPL35AP18077 110 aaKnown RBP5.51□□□□□ -1.53
PTP4A1-206ENST00000627002 SRIP30626 198 aa5.51□□□□□ -1.53
PTP4A1-206ENST00000627002 SSTP61278 116 aa5.51□□□□□ -1.53
PTP4A1-206ENST00000627002 ZNF415Q09FC8 603 aa5.51□□□□□ -1.53
PTP4A1-206ENST00000627002 Q0VG73 95 aa5.51□□□□□ -1.53
PTP4A1-206ENST00000627002 RBMY1FQ15415 496 aaKnown RBP5.51□□□□□ -1.53
PTP4A1-206ENST00000627002 KIAA1644Q3SXP7 199 aa5.51□□□□□ -1.53
PTP4A1-206ENST00000627002 OR10J3Q5JRS4 329 aa5.51□□□□□ -1.53
PTP4A1-206ENST00000627002 COA6Q5JTJ3 125 aaKnown RBP5.51□□□□□ -1.53
PTP4A1-206ENST00000627002 FAM104BQ5XKR9 115 aa5.51□□□□□ -1.53
PTP4A1-206ENST00000627002 TMEM208Q9BTX3 173 aa5.51□□□□□ -1.53
PTP4A1-206ENST00000627002 CSTL1Q9H114 145 aa5.51□□□□□ -1.53
PTP4A1-206ENST00000627002 XCL2Q9UBD3 114 aa5.51□□□□□ -1.53
PTP4A1-206ENST00000627002 TP53TG3Q9ULZ0 132 aa5.51□□□□□ -1.53
PTP4A1-206ENST00000627002 KIR2DL5BA0A0G2JN68 375 aa5.5□□□□□ -1.53
PTP4A1-206ENST00000627002 KIR2DL5BA0A0G2JPC4 375 aa5.5□□□□□ -1.53
PTP4A1-206ENST00000627002 M0R381 172 aa5.5□□□□□ -1.53
PTP4A1-206ENST00000627002 PPBPP02775 128 aa5.5□□□□□ -1.53
PTP4A1-206ENST00000627002 HTN1P15515 57 aa5.5□□□□□ -1.53
PTP4A1-206ENST00000627002 SNRPEP62304 92 aaKnown RBP5.5□□□□□ -1.53
PTP4A1-206ENST00000627002 KIR2DL5AQ8N109 375 aa5.5□□□□□ -1.53
PTP4A1-206ENST00000627002 C1orf158Q8N1D5 194 aa5.5□□□□□ -1.53
PTP4A1-206ENST00000627002 KIR2DL5BQ8NHK3 375 aa5.5□□□□□ -1.53
PTP4A1-206ENST00000627002 PTH2Q96A98 100 aa5.5□□□□□ -1.53
PTP4A1-206ENST00000627002 AP1S3Q96PC3 154 aa5.5□□□□□ -1.53
PTP4A1-206ENST00000627002 ALKBH7Q9BT30 221 aaPredicted RBP5.5□□□□□ -1.53
PTP4A1-206ENST00000627002 SPXQ9BT56 116 aa5.5□□□□□ -1.53
PTP4A1-206ENST00000627002 MSRB1Q9NZV6 116 aa5.5□□□□□ -1.53
PTP4A1-206ENST00000627002 MDFICQ9P1T7 246 aa5.5□□□□□ -1.53
PTP4A1-206ENST00000627002 LOC105371267A0A1B0GV96 52 aa5.49□□□□□ -1.53
PTP4A1-206ENST00000627002 UBE2CO00762 179 aa5.49□□□□□ -1.53
PTP4A1-206ENST00000627002 GIG44P09565 113 aaPredicted RBP5.49□□□□□ -1.53
PTP4A1-206ENST00000627002 SMIM17P0DL12 118 aa5.49□□□□□ -1.53
PTP4A1-206ENST00000627002 RAB4AP20338 218 aa5.49□□□□□ -1.53
PTP4A1-206ENST00000627002 HOXA5P20719 270 aa5.49□□□□□ -1.53
PTP4A1-206ENST00000627002 APOC4P55056 127 aa5.49□□□□□ -1.53
PTP4A1-206ENST00000627002 EGFEM1PQ0D2K5 195 aa5.49□□□□□ -1.53
PTP4A1-206ENST00000627002 MRPL51Q4U2R6 128 aaKnown RBP5.49□□□□□ -1.53
PTP4A1-206ENST00000627002 PIK3CD-AS1Q5SR53 167 aa5.49□□□□□ -1.53
PTP4A1-206ENST00000627002 BAGE3Q86Y29 109 aa5.49□□□□□ -1.53
PTP4A1-206ENST00000627002 AMN1Q8IY45 258 aa5.49□□□□□ -1.53
PTP4A1-206ENST00000627002 ORMDL3Q8N138 153 aa5.49□□□□□ -1.53
PTP4A1-206ENST00000627002 RCHY1Q96PM5 261 aa5.49□□□□□ -1.53
PTP4A1-206ENST00000627002 NDUFAF3Q9BU61 184 aa5.49□□□□□ -1.53
PTP4A1-206ENST00000627002 DPH3P1Q9H4G8 78 aa5.49□□□□□ -1.53
PTP4A1-206ENST00000627002 LAMTOR2Q9Y2Q5 125 aa5.49□□□□□ -1.53
PTP4A1-206ENST00000627002 U3KQK5 164 aa5.49□□□□□ -1.53
PTP4A1-206ENST00000627002 IGHV3OR16-12A0A075B7B8 117 aa5.48□□□□□ -1.53
PTP4A1-206ENST00000627002 D6R8Y8 96 aa5.48□□□□□ -1.53
PTP4A1-206ENST00000627002 M0R2P5 195 aa5.48□□□□□ -1.53
PTP4A1-206ENST00000627002 EVI2AP22794 236 aa5.48□□□□□ -1.53
PTP4A1-206ENST00000627002 CKS2P33552 79 aa5.48□□□□□ -1.53
PTP4A1-206ENST00000627002 ZNF705AQ6ZN79 300 aaPredicted RBP5.48□□□□□ -1.53
PTP4A1-206ENST00000627002 CSNK1G2-AS1Q8NCQ2 148 aa5.48□□□□□ -1.53
PTP4A1-206ENST00000627002 C18orf32Q8TCD1 76 aa5.48□□□□□ -1.53
PTP4A1-206ENST00000627002 TMEM263Q8WUH6 116 aaKnown RBP5.48□□□□□ -1.53
PTP4A1-206ENST00000627002 MRAP2Q96G30 205 aa5.48□□□□□ -1.53
PTP4A1-206ENST00000627002 RNF185Q96GF1 192 aa5.48□□□□□ -1.53
PTP4A1-206ENST00000627002 FAM229AH3BQW9 127 aa5.47□□□□□ -1.53
PTP4A1-206ENST00000627002 SPRY2O43597 315 aa5.47□□□□□ -1.53
PTP4A1-206ENST00000627002 S100A2P29034 98 aa5.47□□□□□ -1.53
PTP4A1-206ENST00000627002 ZNF876PQ49A33 203 aa5.47□□□□□ -1.53
PTP4A1-206ENST00000627002 HIST3H2BBQ8N257 126 aa5.47□□□□□ -1.53
PTP4A1-206ENST00000627002 C14orf178Q8N769 122 aaPredicted RBP5.47□□□□□ -1.53
PTP4A1-206ENST00000627002 C11orf72Q8NBR9 251 aa5.47□□□□□ -1.53
PTP4A1-206ENST00000627002 RNASE8Q8TDE3 154 aaKnown RBP5.47□□□□□ -1.53
PTP4A1-206ENST00000627002 C16orf74Q96GX8 76 aa5.47□□□□□ -1.53
PTP4A1-206ENST00000627002 PRELID3AQ96N28 172 aa5.47□□□□□ -1.53
PTP4A1-206ENST00000627002 GSN-AS1Q9NRJ2 163 aa5.47□□□□□ -1.53
PTP4A1-206ENST00000627002 SMIM9A6NGZ8 99 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms