RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 C9orf47Q6ZRZ4 202 aa11.97□□□□□ -0.49
NPHP4-211ENST00000622020 ARL17AQ8IVW1 177 aa11.97□□□□□ -0.49
NPHP4-211ENST00000622020 A0A1B0GWB2 263 aa11.97□□□□□ -0.49
NPHP4-211ENST00000622020 PRSS29PA6NIE9 313 aa11.97□□□□□ -0.49
NPHP4-211ENST00000622020 ZNF815PA8K554 130 aa11.97□□□□□ -0.49
NPHP4-211ENST00000622020 PRSS47A8MTI9 375 aa11.97□□□□□ -0.49
NPHP4-211ENST00000622020 SLC25A16P16260 332 aa11.97□□□□□ -0.49
NPHP4-211ENST00000622020 CELSR2Q9HCU4 2923 aa11.97□□□□□ -0.49
NPHP4-211ENST00000622020 CENPVL3A0A0U1RRI6 287 aa11.96□□□□□ -0.49
NPHP4-211ENST00000622020 A0A1B0GV72 72 aa11.96□□□□□ -0.49
NPHP4-211ENST00000622020 MRPL16Q9NX20 251 aaKnown RBP11.96□□□□□ -0.49
NPHP4-211ENST00000622020 DUSP14O95147 198 aaKnown RBP11.96□□□□□ -0.5
NPHP4-211ENST00000622020 CSMD2Q7Z408 3487 aa11.96□□□□□ -0.5
NPHP4-211ENST00000622020 OOSP1A8MZH6 123 aa11.95□□□□□ -0.5
NPHP4-211ENST00000622020 LGALS1P09382 135 aaKnown RBP11.95□□□□□ -0.5
NPHP4-211ENST00000622020 EDN2P20800 178 aa11.95□□□□□ -0.5
NPHP4-211ENST00000622020 UBE2E1P51965 193 aa11.95□□□□□ -0.5
NPHP4-211ENST00000622020 BAALCQ8WXS3 180 aa11.95□□□□□ -0.5
NPHP4-211ENST00000622020 A0A087WWL8 130 aa11.95□□□□□ -0.5
NPHP4-211ENST00000622020 RRN3P1Q2M238 152 aa11.95□□□□□ -0.5
NPHP4-211ENST00000622020 OR10J6PQ8NGY7 276 aa11.95□□□□□ -0.5
NPHP4-211ENST00000622020 ZNF418Q8TF45 676 aaPredicted RBP11.95□□□□□ -0.5
NPHP4-211ENST00000622020 TRBV7-3A0A075B6L6 115 aa11.95□□□□□ -0.5
NPHP4-211ENST00000622020 LINC01549A6NIU2 74 aa11.95□□□□□ -0.5
NPHP4-211ENST00000622020 HOXA3O43365 443 aaPredicted RBP11.95□□□□□ -0.5
NPHP4-211ENST00000622020 CKS1BP61024 79 aa11.95□□□□□ -0.5
NPHP4-211ENST00000622020 ZFAND2AQ8N6M9 145 aa11.95□□□□□ -0.5
NPHP4-211ENST00000622020 TRAV41A0A0B4J266 112 aa11.94□□□□□ -0.5
NPHP4-211ENST00000622020 F8W1H4 67 aa11.94□□□□□ -0.5
NPHP4-211ENST00000622020 ASIPP42127 132 aa11.94□□□□□ -0.5
NPHP4-211ENST00000622020 C1orf122Q6ZSJ8 110 aa11.94□□□□□ -0.5
NPHP4-211ENST00000622020 NEXN-AS1Q8NBZ9 246 aa11.94□□□□□ -0.5
NPHP4-211ENST00000622020 TRBV7-1A0A0A6YYK4 115 aa11.94□□□□□ -0.5
NPHP4-211ENST00000622020 F5H697 171 aa11.94□□□□□ -0.5
NPHP4-211ENST00000622020 IGKV3-20P01619 116 aa11.94□□□□□ -0.5
NPHP4-211ENST00000622020 RPL39P62891 51 aaKnown RBP11.94□□□□□ -0.5
NPHP4-211ENST00000622020 ZFP2Q6ZN57 461 aa11.94□□□□□ -0.5
NPHP4-211ENST00000622020 GPHB5Q86YW7 130 aa11.94□□□□□ -0.5
NPHP4-211ENST00000622020 ORMDL2Q53FV1 153 aa11.93□□□□□ -0.5
NPHP4-211ENST00000622020 C5orf56Q8N8D9 126 aa11.93□□□□□ -0.5
NPHP4-211ENST00000622020 PTH2Q96A98 100 aa11.93□□□□□ -0.5
NPHP4-211ENST00000622020 MUC4Q99102 2169 aa11.93□□□□□ -0.5
NPHP4-211ENST00000622020 NPFFO15130 113 aa11.93□□□□□ -0.5
NPHP4-211ENST00000622020 PSMB2P49721 201 aa11.93□□□□□ -0.5
NPHP4-211ENST00000622020 FAM74A4Q5TZK3 123 aa11.93□□□□□ -0.5
NPHP4-211ENST00000622020 TOMM6Q96B49 74 aa11.93□□□□□ -0.5
NPHP4-211ENST00000622020 MRAP2Q96G30 205 aa11.93□□□□□ -0.5
NPHP4-211ENST00000622020 DPH3P1Q9H4G8 78 aa11.93□□□□□ -0.5
NPHP4-211ENST00000622020 TRAV26-1A0A087WT03 109 aa11.92□□□□□ -0.5
NPHP4-211ENST00000622020 MORN3Q6PF18 240 aaPredicted RBP11.92□□□□□ -0.5
NPHP4-211ENST00000622020 C20orf78Q9BR46 151 aa11.92□□□□□ -0.5
NPHP4-211ENST00000622020 FBXL19-AS1Q494R0 122 aa11.92□□□□□ -0.5
NPHP4-211ENST00000622020 TRAV21A0A0B4J279 112 aa11.92□□□□□ -0.5
NPHP4-211ENST00000622020 PSMG4Q5JS54 123 aa11.92□□□□□ -0.5
NPHP4-211ENST00000622020 SCGB1A1P11684 91 aa11.91□□□□□ -0.5
NPHP4-211ENST00000622020 J3QR89 54 aa11.91□□□□□ -0.5
NPHP4-211ENST00000622020 IGHV4-4A0A075B6R2 117 aa11.9□□□□□ -0.5
NPHP4-211ENST00000622020 PF4V1P10720 104 aa11.9□□□□□ -0.5
NPHP4-211ENST00000622020 Q6ZS46 218 aa11.9□□□□□ -0.5
NPHP4-211ENST00000622020 TP53TG1Q9Y2A0 90 aa11.9□□□□□ -0.5
NPHP4-211ENST00000622020 C9orf139Q6ZV77 190 aa11.9□□□□□ -0.5
NPHP4-211ENST00000622020 U3KQE9 123 aa11.9□□□□□ -0.5
NPHP4-211ENST00000622020 IGHV3-64A0A075B6Q5 118 aa11.89□□□□□ -0.51
NPHP4-211ENST00000622020 C11orf86A6NJI1 115 aa11.89□□□□□ -0.51
NPHP4-211ENST00000622020 RNF223E7ERA6 249 aa11.89□□□□□ -0.51
NPHP4-211ENST00000622020 RNASE3P12724 160 aaKnown RBP11.89□□□□□ -0.51
NPHP4-211ENST00000622020 TMEM170BQ5T4T1 132 aa11.89□□□□□ -0.51
NPHP4-211ENST00000622020 ITLN2Q8WWU7 325 aaPredicted RBP11.89□□□□□ -0.51
NPHP4-211ENST00000622020 ABCA2Q9BZC7 2435 aa11.89□□□□□ -0.51
NPHP4-211ENST00000622020 TRAV12-1A0A0B4J245 112 aa11.89□□□□□ -0.51
NPHP4-211ENST00000622020 TAL2Q16559 108 aa11.89□□□□□ -0.51
NPHP4-211ENST00000622020 OPRPNQ99935 248 aaPredicted RBP11.89□□□□□ -0.51
NPHP4-211ENST00000622020 SPATA25Q9BR10 227 aa11.89□□□□□ -0.51
NPHP4-211ENST00000622020 ZNF256Q9Y2P7 627 aaPredicted RBP11.89□□□□□ -0.51
NPHP4-211ENST00000622020 LMO4P61968 165 aa11.89□□□□□ -0.51
NPHP4-211ENST00000622020 NDUFS8O00217 210 aa11.88□□□□□ -0.51
NPHP4-211ENST00000622020 CRYGDP07320 174 aa11.88□□□□□ -0.51
NPHP4-211ENST00000622020 BLCAPP62952 87 aa11.88□□□□□ -0.51
NPHP4-211ENST00000622020 SVIPQ8NHG7 77 aa11.88□□□□□ -0.51
NPHP4-211ENST00000622020 LINC00477Q96M19 166 aa11.88□□□□□ -0.51
NPHP4-211ENST00000622020 PRO0461Q9UI25 63 aa11.88□□□□□ -0.51
NPHP4-211ENST00000622020 TRAV12-3A0A0B4J271 114 aa11.88□□□□□ -0.51
NPHP4-211ENST00000622020 CRYBA4P53673 196 aa11.88□□□□□ -0.51
NPHP4-211ENST00000622020 H7C2G1 150 aa11.87□□□□□ -0.51
NPHP4-211ENST00000622020 TSHBP01222 138 aa11.87□□□□□ -0.51
NPHP4-211ENST00000622020 MRPL53Q96EL3 112 aaKnown RBP11.87□□□□□ -0.51
NPHP4-211ENST00000622020 RHPN1-AS1Q9BWJ2 59 aa11.87□□□□□ -0.51
NPHP4-211ENST00000622020 TRAV12-2A0A075B6T6 113 aa11.86□□□□□ -0.51
NPHP4-211ENST00000622020 CD7P09564 240 aa11.86□□□□□ -0.51
NPHP4-211ENST00000622020 SMCPP49901 116 aaPredicted RBP11.86□□□□□ -0.51
NPHP4-211ENST00000622020 SYT8Q8NBV8 401 aa11.86□□□□□ -0.51
NPHP4-211ENST00000622020 NOTCH3Q9UM47 2321 aa11.86□□□□□ -0.51
NPHP4-211ENST00000622020 TSPAN13O95857 204 aa11.85□□□□□ -0.51
NPHP4-211ENST00000622020 NFE4Q86UQ8 179 aa11.85□□□□□ -0.51
NPHP4-211ENST00000622020 MOB4Q9Y3A3 225 aa11.85□□□□□ -0.51
NPHP4-211ENST00000622020 USP9YO00507 2555 aaPredicted RBP11.85□□□□□ -0.51
NPHP4-211ENST00000622020 CENPEQ02224 2701 aa11.85□□□□□ -0.51
NPHP4-211ENST00000622020 NBL1P41271 181 aa11.85□□□□□ -0.51
NPHP4-211ENST00000622020 TSPEAR-AS2P59090 65 aa11.85□□□□□ -0.51
NPHP4-211ENST00000622020 GEMIN7Q9H840 131 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms