RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 MAP1LC3BQ9GZQ8 125 aa13.91□□□□□ -0.18
SMC6-210ENST00000621152 MSRB1Q9NZV6 116 aa13.91□□□□□ -0.18
SMC6-210ENST00000621152 TRBV6-4A0A1B0GX49 114 aa13.9□□□□□ -0.18
SMC6-210ENST00000621152 CRYGDP07320 174 aa13.89□□□□□ -0.19
SMC6-210ENST00000621152 TIRAPP58753 221 aa13.89□□□□□ -0.19
SMC6-210ENST00000621152 ERVFC1-1P60608 527 aa13.89□□□□□ -0.19
SMC6-210ENST00000621152 RHOHQ15669 191 aa13.89□□□□□ -0.19
SMC6-210ENST00000621152 STOML3Q8TAV4 291 aa13.89□□□□□ -0.19
SMC6-210ENST00000621152 PGPEP1Q9NXJ5 209 aa13.89□□□□□ -0.19
SMC6-210ENST00000621152 ASIPP42127 132 aa13.88□□□□□ -0.19
SMC6-210ENST00000621152 CRIP1P50238 77 aa13.88□□□□□ -0.19
SMC6-210ENST00000621152 LGALSLQ3ZCW2 172 aaPredicted RBP13.88□□□□□ -0.19
SMC6-210ENST00000621152 CST9LP1Q5W188 147 aa13.88□□□□□ -0.19
SMC6-210ENST00000621152 Q86TA4 180 aa13.88□□□□□ -0.19
SMC6-210ENST00000621152 MAPKAPK5-AS1Q8N8E1 139 aa13.88□□□□□ -0.19
SMC6-210ENST00000621152 IGHV3-38A0A0C4DH36 116 aa13.87□□□□□ -0.19
SMC6-210ENST00000621152 FUSP35637 526 aaKnown RBP eCLIP13.87□□□□□ -0.19
SMC6-210ENST00000621152 FHITP49789 147 aa13.87□□□□□ -0.19
SMC6-210ENST00000621152 KCNRGQ8N5I3 272 aa13.87□□□□□ -0.19
SMC6-210ENST00000621152 ZFP30Q9Y2G7 519 aa13.87□□□□□ -0.19
SMC6-210ENST00000621152 TRAV8-6A0A0B4J262 113 aa13.86□□□□□ -0.19
SMC6-210ENST00000621152 B4DEV8 164 aa13.86□□□□□ -0.19
SMC6-210ENST00000621152 MGST1P10620 155 aaKnown RBP13.86□□□□□ -0.19
SMC6-210ENST00000621152 OR10J3Q5JRS4 329 aa13.86□□□□□ -0.19
SMC6-210ENST00000621152 Q6ZSN1 163 aa13.86□□□□□ -0.19
SMC6-210ENST00000621152 C10orf126Q8N4M7 172 aa13.86□□□□□ -0.19
SMC6-210ENST00000621152 ZC2HC1AQ96GY0 325 aa13.86□□□□□ -0.19
SMC6-210ENST00000621152 A0A087WTM6 91 aa13.85□□□□□ -0.19
SMC6-210ENST00000621152 A8MWV9 139 aa13.85□□□□□ -0.19
SMC6-210ENST00000621152 M0R036 132 aa13.85□□□□□ -0.19
SMC6-210ENST00000621152 UBE2G1P62253 170 aa13.85□□□□□ -0.19
SMC6-210ENST00000621152 ATP6V0E2Q8NHE4 81 aa13.85□□□□□ -0.19
SMC6-210ENST00000621152 FMC1Q96HJ9 113 aa13.85□□□□□ -0.19
SMC6-210ENST00000621152 PARLQ9H300 379 aa13.85□□□□□ -0.19
SMC6-210ENST00000621152 KRBOX1C9JBD0 128 aa13.84□□□□□ -0.19
SMC6-210ENST00000621152 SH2D1AO60880 128 aa13.84□□□□□ -0.19
SMC6-210ENST00000621152 PIK3CD-AS1Q5SR53 167 aa13.84□□□□□ -0.19
SMC6-210ENST00000621152 ZFP2Q6ZN57 461 aa13.84□□□□□ -0.19
SMC6-210ENST00000621152 OR11H4Q8NGC9 324 aa13.84□□□□□ -0.19
SMC6-210ENST00000621152 SFT2D1Q8WV19 159 aa13.84□□□□□ -0.19
SMC6-210ENST00000621152 JPT2Q9H910 190 aa13.84□□□□□ -0.19
SMC6-210ENST00000621152 IL36BQ9NZH7 164 aa13.84□□□□□ -0.19
SMC6-210ENST00000621152 GRIFINA4D1Z8 144 aa13.83□□□□□ -0.2
SMC6-210ENST00000621152 HMSDA8MTL9 139 aa13.83□□□□□ -0.2
SMC6-210ENST00000621152 H3BVH4 76 aa13.83□□□□□ -0.2
SMC6-210ENST00000621152 PAGE4O60829 102 aa13.83□□□□□ -0.2
SMC6-210ENST00000621152 ARMS2P0C7Q2 107 aa13.83□□□□□ -0.2
SMC6-210ENST00000621152 SEC11BP0C7V7 166 aa13.83□□□□□ -0.2
SMC6-210ENST00000621152 ZNF345Q14585 488 aa13.83□□□□□ -0.2
SMC6-210ENST00000621152 FAM162BQ5T6X4 162 aa13.83□□□□□ -0.2
SMC6-210ENST00000621152 DMRTA1Q5VZB9 504 aa13.83□□□□□ -0.2
SMC6-210ENST00000621152 COX8CQ7Z4L0 72 aa13.83□□□□□ -0.2
SMC6-210ENST00000621152 GTSF1LQ9H1H1 148 aa13.83□□□□□ -0.2
SMC6-210ENST00000621152 RYR1P21817 5038 aa13.82□□□□□ -0.2
SMC6-210ENST00000621152 LRP1BQ9NZR2 4599 aa13.82□□□□□ -0.2
SMC6-210ENST00000621152 A0A0D9SG52 128 aa13.82□□□□□ -0.2
SMC6-210ENST00000621152 LINC01556Q5JQF7 62 aa13.82□□□□□ -0.2
SMC6-210ENST00000621152 DNLZQ5SXM8 178 aa13.82□□□□□ -0.2
SMC6-210ENST00000621152 LELP1Q5T871 98 aa13.82□□□□□ -0.2
SMC6-210ENST00000621152 FAM213BQ8TBF2 198 aa13.82□□□□□ -0.2
SMC6-210ENST00000621152 MBD3L1Q8WWY6 194 aa13.82□□□□□ -0.2
SMC6-210ENST00000621152 SAMD10Q9BYL1 202 aa13.82□□□□□ -0.2
SMC6-210ENST00000621152 BOLA1Q9Y3E2 137 aa13.82□□□□□ -0.2
SMC6-210ENST00000621152 PCLOQ9Y6V0 5065 aa13.82□□□□□ -0.2
SMC6-210ENST00000621152 TRBV6-1A0A0K0K1D8 114 aa13.81□□□□□ -0.2
SMC6-210ENST00000621152 GAGE12JA6NER3 117 aa13.81□□□□□ -0.2
SMC6-210ENST00000621152 IGHV3-30P01768 117 aa13.81□□□□□ -0.2
SMC6-210ENST00000621152 IGHV3-33P01772 117 aa13.81□□□□□ -0.2
SMC6-210ENST00000621152 IGHV3-30-3P0DP02 117 aa13.81□□□□□ -0.2
SMC6-210ENST00000621152 IGHV3-30-5P0DP03 117 aa13.81□□□□□ -0.2
SMC6-210ENST00000621152 GAGE1Q13065 139 aa13.81□□□□□ -0.2
SMC6-210ENST00000621152 GAGE4Q13068 117 aa13.81□□□□□ -0.2
SMC6-210ENST00000621152 GAGE5Q13069 117 aa13.81□□□□□ -0.2
SMC6-210ENST00000621152 ZNF674Q2M3X9 581 aa13.81□□□□□ -0.2
SMC6-210ENST00000621152 GAGE13Q4V321 117 aa13.81□□□□□ -0.2
SMC6-210ENST00000621152 SYT8Q8NBV8 401 aa13.81□□□□□ -0.2
SMC6-210ENST00000621152 TCEAL7Q9BRU2 100 aa13.81□□□□□ -0.2
SMC6-210ENST00000621152 ZNF471Q9BX82 626 aaPredicted RBP13.81□□□□□ -0.2
SMC6-210ENST00000621152 TMSB15BA0A087X1C1 80 aa13.8□□□□□ -0.2
SMC6-210ENST00000621152 A0A1B0GV50 99 aa13.8□□□□□ -0.2
SMC6-210ENST00000621152 KANTRA0A1W2PQU2 76 aa13.8□□□□□ -0.2
SMC6-210ENST00000621152 IBA57-AS1B1ANH7 110 aa13.8□□□□□ -0.2
SMC6-210ENST00000621152 UMAD1C9J7I0 102 aa13.8□□□□□ -0.2
SMC6-210ENST00000621152 LTAP01374 205 aa13.8□□□□□ -0.2
SMC6-210ENST00000621152 AKR1C3P42330 323 aa13.8□□□□□ -0.2
SMC6-210ENST00000621152 SCRT2Q9NQ03 307 aa13.8□□□□□ -0.2
SMC6-210ENST00000621152 HSPG2P98160 4391 aa13.79□□□□□ -0.2
SMC6-210ENST00000621152 CDPF1Q6NVV7 123 aa13.79□□□□□ -0.2
SMC6-210ENST00000621152 Q8N1X5 172 aa13.79□□□□□ -0.2
SMC6-210ENST00000621152 Q9UF83 564 aa13.79□□□□□ -0.2
SMC6-210ENST00000621152 PHLDA3Q9Y5J5 127 aa13.79□□□□□ -0.2
SMC6-210ENST00000621152 BCL2L11O43521 198 aa13.78□□□□□ -0.2
SMC6-210ENST00000621152 PSCAO43653 123 aa13.78□□□□□ -0.2
SMC6-210ENST00000621152 UFSP1Q6NVU6 142 aa13.78□□□□□ -0.2
SMC6-210ENST00000621152 C14orf178Q8N769 122 aaPredicted RBP13.78□□□□□ -0.2
SMC6-210ENST00000621152 TPT1P13693 172 aaKnown RBP13.77□□□□□ -0.21
SMC6-210ENST00000621152 LINC01559Q495D7 138 aa13.77□□□□□ -0.21
SMC6-210ENST00000621152 Q9HAA7 133 aa13.77□□□□□ -0.21
SMC6-210ENST00000621152 S100A9P06702 114 aaKnown RBP13.76□□□□□ -0.21
SMC6-210ENST00000621152 H2AFB1P0C5Y9 115 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms