RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 hADV29S1A0JD25 119 aa6.48□□□□□ -1.37
ALMS1-208ENST00000620466 DAZAP2Q15038 168 aaPredicted RBP6.48□□□□□ -1.37
ALMS1-208ENST00000620466 PKIGQ9Y2B9 76 aa6.48□□□□□ -1.37
ALMS1-208ENST00000620466 TRAV13-2A0A0B4J235 113 aa6.48□□□□□ -1.37
ALMS1-208ENST00000620466 APRG1Q8IVJ8 170 aa6.48□□□□□ -1.37
ALMS1-208ENST00000620466 U3KQE9 123 aa6.48□□□□□ -1.37
ALMS1-208ENST00000620466 TRBV6-1A0A0K0K1D8 114 aa6.48□□□□□ -1.37
ALMS1-208ENST00000620466 IGLV1-47P01700 117 aa6.48□□□□□ -1.37
ALMS1-208ENST00000620466 F8W735 103 aaPredicted RBP6.48□□□□□ -1.37
ALMS1-208ENST00000620466 H3BMG7 143 aa6.48□□□□□ -1.37
ALMS1-208ENST00000620466 NBL1P41271 181 aa6.48□□□□□ -1.37
ALMS1-208ENST00000620466 LINC00322Q6ZN03 302 aaPredicted RBP6.47□□□□□ -1.37
ALMS1-208ENST00000620466 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.47□□□□□ -1.37
ALMS1-208ENST00000620466 A0A1B0GXF2 115 aa6.47□□□□□ -1.37
ALMS1-208ENST00000620466 IGKV2-29A2NJV5 120 aaPredicted RBP6.47□□□□□ -1.37
ALMS1-208ENST00000620466 PRAC2D3DTV9 90 aa6.47□□□□□ -1.37
ALMS1-208ENST00000620466 TAX1BP3O14907 124 aa6.47□□□□□ -1.37
ALMS1-208ENST00000620466 IGHG4P01861 327 aa6.47□□□□□ -1.37
ALMS1-208ENST00000620466 CRYGCP07315 174 aa6.47□□□□□ -1.37
ALMS1-208ENST00000620466 Q8N7P7 452 aa6.47□□□□□ -1.37
ALMS1-208ENST00000620466 LINC00574Q9H8X3 128 aa6.47□□□□□ -1.37
ALMS1-208ENST00000620466 TP53TG3Q9ULZ0 132 aa6.47□□□□□ -1.37
ALMS1-208ENST00000620466 CACNA1EQ15878 2313 aa6.47□□□□□ -1.37
ALMS1-208ENST00000620466 CEP192Q8TEP8 1941 aa6.47□□□□□ -1.37
ALMS1-208ENST00000620466 SRSF2Q01130 221 aaKnown RBP6.47□□□□□ -1.37
ALMS1-208ENST00000620466 RPL39LQ96EH5 51 aaKnown RBP6.47□□□□□ -1.37
ALMS1-208ENST00000620466 C16orf74Q96GX8 76 aa6.47□□□□□ -1.37
ALMS1-208ENST00000620466 NDUFA12Q9UI09 145 aa6.47□□□□□ -1.37
ALMS1-208ENST00000620466 ICOSQ9Y6W8 199 aa6.47□□□□□ -1.37
ALMS1-208ENST00000620466 TRAV12-1A0A0B4J245 112 aa6.47□□□□□ -1.37
ALMS1-208ENST00000620466 CENPVL3A0A0U1RRI6 287 aa6.47□□□□□ -1.37
ALMS1-208ENST00000620466 NDUFC2O95298 119 aa6.47□□□□□ -1.37
ALMS1-208ENST00000620466 TIRAPP58753 221 aa6.47□□□□□ -1.37
ALMS1-208ENST00000620466 CPAMD8Q8IZJ3 1885 aa6.47□□□□□ -1.37
ALMS1-208ENST00000620466 ETDBQ3ZM63 59 aa6.47□□□□□ -1.37
ALMS1-208ENST00000620466 UBL5Q9BZL1 73 aa6.47□□□□□ -1.37
ALMS1-208ENST00000620466 ATG2AQ2TAZ0 1938 aa6.46□□□□□ -1.37
ALMS1-208ENST00000620466 IGHV4-4A0A075B6R2 117 aa6.46□□□□□ -1.37
ALMS1-208ENST00000620466 C2orf70A6NJV1 201 aa6.46□□□□□ -1.37
ALMS1-208ENST00000620466 IGHV3-30P01768 117 aa6.46□□□□□ -1.37
ALMS1-208ENST00000620466 IGHV3-33P01772 117 aa6.46□□□□□ -1.37
ALMS1-208ENST00000620466 IGHV3-30-3P0DP02 117 aa6.46□□□□□ -1.37
ALMS1-208ENST00000620466 IGHV3-30-5P0DP03 117 aa6.46□□□□□ -1.37
ALMS1-208ENST00000620466 HAMPP81172 84 aa6.46□□□□□ -1.38
ALMS1-208ENST00000620466 MYO7BQ6PIF6 2116 aa6.46□□□□□ -1.38
ALMS1-208ENST00000620466 COL5A1P20908 1838 aaPredicted RBP6.46□□□□□ -1.38
ALMS1-208ENST00000620466 FGF6P10767 208 aa6.46□□□□□ -1.38
ALMS1-208ENST00000620466 AMTNQ6UX39 209 aa6.46□□□□□ -1.38
ALMS1-208ENST00000620466 Q8N9W7 124 aa6.46□□□□□ -1.38
ALMS1-208ENST00000620466 K7EQD1 137 aa6.46□□□□□ -1.38
ALMS1-208ENST00000620466 IGHV4-38-2P0DP08 117 aa6.46□□□□□ -1.38
ALMS1-208ENST00000620466 TRBV20-1A0A075B6N2 111 aa6.46□□□□□ -1.38
ALMS1-208ENST00000620466 C9orf153Q5TBE3 101 aa6.46□□□□□ -1.38
ALMS1-208ENST00000620466 ZNF493Q6ZR52 646 aa6.46□□□□□ -1.38
ALMS1-208ENST00000620466 RNASE8Q8TDE3 154 aaKnown RBP6.46□□□□□ -1.38
ALMS1-208ENST00000620466 TEX48A0A1B0GUV7 120 aa6.45□□□□□ -1.38
ALMS1-208ENST00000620466 K7EMI3 77 aa6.45□□□□□ -1.38
ALMS1-208ENST00000620466 FAM186AA6NE01 2351 aa6.45□□□□□ -1.38
ALMS1-208ENST00000620466 BUB3O43684 328 aa6.45□□□□□ -1.38
ALMS1-208ENST00000620466 TINCRA0A1B0GVN0 87 aa6.45□□□□□ -1.38
ALMS1-208ENST00000620466 CTRLP40313 264 aa6.45□□□□□ -1.38
ALMS1-208ENST00000620466 EML6Q6ZMW3 1958 aa6.45□□□□□ -1.38
ALMS1-208ENST00000620466 J3QQQ9 107 aa6.45□□□□□ -1.38
ALMS1-208ENST00000620466 C16orf54Q6UWD8 224 aa6.45□□□□□ -1.38
ALMS1-208ENST00000620466 PPDPFLQ8WWR9 84 aa6.44□□□□□ -1.38
ALMS1-208ENST00000620466 SS18L2Q9UHA2 77 aa6.44□□□□□ -1.38
ALMS1-208ENST00000620466 LENEPQ9Y5L5 61 aa6.44□□□□□ -1.38
ALMS1-208ENST00000620466 DIDO1Q9BTC0 2240 aaKnown RBP6.44□□□□□ -1.38
ALMS1-208ENST00000620466 IGHV4-30-2A0A087WSY4 118 aa6.44□□□□□ -1.38
ALMS1-208ENST00000620466 GAGE12HA6NDE8 117 aa6.44□□□□□ -1.38
ALMS1-208ENST00000620466 ZFP36P26651 326 aaKnown RBP6.44□□□□□ -1.38
ALMS1-208ENST00000620466 C22orf34Q6ZV56 151 aa6.44□□□□□ -1.38
ALMS1-208ENST00000620466 PRO1854Q9UHT4 67 aa6.44□□□□□ -1.38
ALMS1-208ENST00000620466 IGLL5B9A064 214 aa6.44□□□□□ -1.38
ALMS1-208ENST00000620466 ADORA2A-AS1P86434 159 aa6.44□□□□□ -1.38
ALMS1-208ENST00000620466 CARD19Q96LW7 228 aa6.44□□□□□ -1.38
ALMS1-208ENST00000620466 C1orf43Q9BWL3 253 aa6.44□□□□□ -1.38
ALMS1-208ENST00000620466 ZDBF2Q9HCK1 2354 aa6.44□□□□□ -1.38
ALMS1-208ENST00000620466 GYPEP15421 78 aa6.44□□□□□ -1.38
ALMS1-208ENST00000620466 LOXL1Q08397 574 aaPredicted RBP6.44□□□□□ -1.38
ALMS1-208ENST00000620466 C5orf56Q8N8D9 126 aa6.44□□□□□ -1.38
ALMS1-208ENST00000620466 TTTY13Q9BZ97 58 aa6.43□□□□□ -1.38
ALMS1-208ENST00000620466 CCL18P55774 89 aa6.43□□□□□ -1.38
ALMS1-208ENST00000620466 PIFOQ8TCI5 191 aa6.43□□□□□ -1.38
ALMS1-208ENST00000620466 MBD6Q96DN6 1003 aa6.43□□□□□ -1.38
ALMS1-208ENST00000620466 SPANXCQ9NY87 97 aa6.43□□□□□ -1.38
ALMS1-208ENST00000620466 CHD3Q12873 2000 aaKnown RBP6.43□□□□□ -1.38
ALMS1-208ENST00000620466 FXYD2P54710 66 aa6.43□□□□□ -1.38
ALMS1-208ENST00000620466 C9orf47Q6ZRZ4 202 aa6.43□□□□□ -1.38
ALMS1-208ENST00000620466 SLC25A29Q8N8R3 303 aa6.43□□□□□ -1.38
ALMS1-208ENST00000620466 TNRC6AQ8NDV7 1962 aaKnown RBP6.43□□□□□ -1.38
ALMS1-208ENST00000620466 ETDCA0A1B0GVM5 59 aa6.43□□□□□ -1.38
ALMS1-208ENST00000620466 C15orf53Q8NAA6 179 aa6.43□□□□□ -1.38
ALMS1-208ENST00000620466 FANCD2OSQ96PS1 177 aa6.43□□□□□ -1.38
ALMS1-208ENST00000620466 MLST8Q9BVC4 326 aa6.43□□□□□ -1.38
ALMS1-208ENST00000620466 ORMDL1Q9P0S3 153 aa6.43□□□□□ -1.38
ALMS1-208ENST00000620466 SHANK1Q9Y566 2161 aa6.42□□□□□ -1.38
ALMS1-208ENST00000620466 NCR3O14931 201 aa6.42□□□□□ -1.38
ALMS1-208ENST00000620466 TP73-AS1Q9UF72 201 aa6.42□□□□□ -1.38
ALMS1-208ENST00000620466 NCOA6Q14686 2063 aaPredicted RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms