RNA–Protein interactions for RNA: ENST00000618819.4

PTPN9-206, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN9, Length 7,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-206ENST00000618819 TNRC6BQ9UPQ9 1833 aaKnown RBP11.34□□□□□ -0.59
PTPN9-206ENST00000618819 TMEM256-PLSCR3K7ERE1 68 aa11.34□□□□□ -0.59
PTPN9-206ENST00000618819 GLI3P10071 1580 aa11.34□□□□□ -0.59
PTPN9-206ENST00000618819 NACAE9PAV3 2078 aa11.34□□□□□ -0.59
PTPN9-206ENST00000618819 K7ERS5 55 aa11.34□□□□□ -0.59
PTPN9-206ENST00000618819 LINC00643Q86TS7 51 aa11.34□□□□□ -0.59
PTPN9-206ENST00000618819 DIRC1Q969H9 104 aa11.33□□□□□ -0.6
PTPN9-206ENST00000618819 UQCRQO14949 82 aa11.33□□□□□ -0.6
PTPN9-206ENST00000618819 USP17L23D6RBM5 183 aa11.33□□□□□ -0.6
PTPN9-206ENST00000618819 ATP5G1P05496 136 aa11.33□□□□□ -0.6
PTPN9-206ENST00000618819 B3GALT5-AS1P59052 145 aa11.33□□□□□ -0.6
PTPN9-206ENST00000618819 TM2D2Q9BX73 214 aa11.33□□□□□ -0.6
PTPN9-206ENST00000618819 TEX49A0A1B0GTD5 131 aa11.33□□□□□ -0.6
PTPN9-206ENST00000618819 PRR20EP86478 221 aa11.33□□□□□ -0.6
PTPN9-206ENST00000618819 PRR20CP86479 221 aa11.33□□□□□ -0.6
PTPN9-206ENST00000618819 PRR20DP86480 221 aa11.33□□□□□ -0.6
PTPN9-206ENST00000618819 PRR20BP86481 221 aa11.33□□□□□ -0.6
PTPN9-206ENST00000618819 PRR20AP86496 221 aa11.33□□□□□ -0.6
PTPN9-206ENST00000618819 H3BT86 120 aa11.32□□□□□ -0.6
PTPN9-206ENST00000618819 DYSFO75923 2080 aa11.32□□□□□ -0.6
PTPN9-206ENST00000618819 DEFB136Q30KP8 78 aa11.32□□□□□ -0.6
PTPN9-206ENST00000618819 COA6Q5JTJ3 125 aaKnown RBP11.32□□□□□ -0.6
PTPN9-206ENST00000618819 BPY2O14599 106 aa11.32□□□□□ -0.6
PTPN9-206ENST00000618819 MIR7-3HGQ8N6C7 128 aa11.32□□□□□ -0.6
PTPN9-206ENST00000618819 IGHV4-30-2A0A087WSY4 118 aa11.32□□□□□ -0.6
PTPN9-206ENST00000618819 HIST2H2BDQ6DRA6 164 aa11.32□□□□□ -0.6
PTPN9-206ENST00000618819 C4orf48Q5BLP8 95 aa11.31□□□□□ -0.6
PTPN9-206ENST00000618819 ENHOQ6UWT2 76 aa11.31□□□□□ -0.6
PTPN9-206ENST00000618819 H3BQ85 93 aa11.31□□□□□ -0.6
PTPN9-206ENST00000618819 IGLV3-19P01714 112 aa11.31□□□□□ -0.6
PTPN9-206ENST00000618819 C1orf195Q5TG92 126 aa11.31□□□□□ -0.6
PTPN9-206ENST00000618819 HIGD1BQ9P298 99 aa11.31□□□□□ -0.6
PTPN9-206ENST00000618819 A6NED7 52 aa11.31□□□□□ -0.6
PTPN9-206ENST00000618819 GREB1Q4ZG55 1949 aa11.3□□□□□ -0.6
PTPN9-206ENST00000618819 Q8N1Y9 231 aa11.3□□□□□ -0.6
PTPN9-206ENST00000618819 LMO1P25800 156 aa11.3□□□□□ -0.6
PTPN9-206ENST00000618819 PRR30Q53SZ7 412 aaPredicted RBP11.3□□□□□ -0.6
PTPN9-206ENST00000618819 C16orf54Q6UWD8 224 aa11.3□□□□□ -0.6
PTPN9-206ENST00000618819 Q6ZR03 302 aa11.3□□□□□ -0.6
PTPN9-206ENST00000618819 Q96MF0 132 aa11.3□□□□□ -0.6
PTPN9-206ENST00000618819 FGF23Q9GZV9 251 aaPredicted RBP11.29□□□□□ -0.6
PTPN9-206ENST00000618819 LOXP28300 417 aaPredicted RBP11.29□□□□□ -0.6
PTPN9-206ENST00000618819 SNURFQ9Y675 71 aa11.29□□□□□ -0.6
PTPN9-206ENST00000618819 E9PLD3 99 aa11.29□□□□□ -0.6
PTPN9-206ENST00000618819 NFE4Q86UQ8 179 aa11.29□□□□□ -0.6
PTPN9-206ENST00000618819 TOMM6Q96B49 74 aa11.29□□□□□ -0.6
PTPN9-206ENST00000618819 C15orf65H3BRN8 121 aa11.29□□□□□ -0.6
PTPN9-206ENST00000618819 NDUFA11Q86Y39 141 aa11.29□□□□□ -0.6
PTPN9-206ENST00000618819 WFDC10BQ8IUB3 73 aa11.29□□□□□ -0.6
PTPN9-206ENST00000618819 ZNF407Q9C0G0 2248 aa11.29□□□□□ -0.6
PTPN9-206ENST00000618819 C11orf86A6NJI1 115 aa11.29□□□□□ -0.6
PTPN9-206ENST00000618819 FOXL2NBQ6ZUU3 175 aa11.29□□□□□ -0.6
PTPN9-206ENST00000618819 SPATA12Q7Z6I5 190 aa11.29□□□□□ -0.6
PTPN9-206ENST00000618819 DOCK7Q96N67 2140 aa11.28□□□□□ -0.6
PTPN9-206ENST00000618819 SLX1AQ9BQ83 275 aa11.28□□□□□ -0.6
PTPN9-206ENST00000618819 NDUFA1O15239 70 aa11.28□□□□□ -0.6
PTPN9-206ENST00000618819 CXCL5P42830 114 aa11.28□□□□□ -0.6
PTPN9-206ENST00000618819 ZMAT4Q9H898 229 aa11.28□□□□□ -0.6
PTPN9-206ENST00000618819 FHL1Q13642 323 aa11.28□□□□□ -0.6
PTPN9-206ENST00000618819 DAZ2Q13117 558 aaKnown RBP11.27□□□□□ -0.6
PTPN9-206ENST00000618819 DAZ4Q86SG3 579 aaKnown RBP11.27□□□□□ -0.6
PTPN9-206ENST00000618819 DAZ3Q9NR90 486 aaKnown RBP11.27□□□□□ -0.6
PTPN9-206ENST00000618819 GTSF1Q8WW33 167 aa11.27□□□□□ -0.6
PTPN9-206ENST00000618819 A0A096LNI7 61 aa11.27□□□□□ -0.61
PTPN9-206ENST00000618819 PRR4Q16378 134 aa11.27□□□□□ -0.61
PTPN9-206ENST00000618819 C1orf147Q96MC9 270 aaPredicted RBP11.26□□□□□ -0.61
PTPN9-206ENST00000618819 SLPIP03973 132 aa11.26□□□□□ -0.61
PTPN9-206ENST00000618819 IL15RAQ13261 267 aa11.26□□□□□ -0.61
PTPN9-206ENST00000618819 PRR15LQ9BU68 103 aa11.25□□□□□ -0.61
PTPN9-206ENST00000618819 ZDBF2Q9HCK1 2354 aa11.25□□□□□ -0.61
PTPN9-206ENST00000618819 COX7BP24311 80 aa11.25□□□□□ -0.61
PTPN9-206ENST00000618819 TIMM17BO60830 172 aa11.25□□□□□ -0.61
PTPN9-206ENST00000618819 FRMD6-AS1P0C7T7 363 aa11.25□□□□□ -0.61
PTPN9-206ENST00000618819 SLURP1P55000 103 aa11.25□□□□□ -0.61
PTPN9-206ENST00000618819 TAF1LQ8IZX4 1826 aa11.25□□□□□ -0.61
PTPN9-206ENST00000618819 FANCD2OSQ96PS1 177 aa11.24□□□□□ -0.61
PTPN9-206ENST00000618819 CTSGP08311 255 aa11.24□□□□□ -0.61
PTPN9-206ENST00000618819 CD59P13987 128 aa11.24□□□□□ -0.61
PTPN9-206ENST00000618819 ODF1Q14990 250 aa11.24□□□□□ -0.61
PTPN9-206ENST00000618819 SPTA1P02549 2419 aa11.24□□□□□ -0.61
PTPN9-206ENST00000618819 Q8TCH9 128 aa11.24□□□□□ -0.61
PTPN9-206ENST00000618819 ELANEP08246 267 aa11.24□□□□□ -0.61
PTPN9-206ENST00000618819 SPAG11BQ08648 103 aa11.24□□□□□ -0.61
PTPN9-206ENST00000618819 ZNF503-AS2A6NEH8 195 aa11.24□□□□□ -0.61
PTPN9-206ENST00000618819 TRIOBPQ9H2D6 2365 aa11.24□□□□□ -0.61
PTPN9-206ENST00000618819 GATA3P23771 443 aa11.23□□□□□ -0.61
PTPN9-206ENST00000618819 PIK3CD-AS1Q5SR53 167 aa11.23□□□□□ -0.61
PTPN9-206ENST00000618819 C16orf74Q96GX8 76 aa11.23□□□□□ -0.61
PTPN9-206ENST00000618819 RBBP6Q7Z6E9 1792 aaKnown RBP11.23□□□□□ -0.61
PTPN9-206ENST00000618819 CEMP1Q6PRD7 247 aaPredicted RBP11.23□□□□□ -0.61
PTPN9-206ENST00000618819 PIFOQ8TCI5 191 aa11.23□□□□□ -0.61
PTPN9-206ENST00000618819 EML6Q6ZMW3 1958 aa11.23□□□□□ -0.61
PTPN9-206ENST00000618819 ARID2Q68CP9 1835 aa11.23□□□□□ -0.61
PTPN9-206ENST00000618819 F8W735 103 aaPredicted RBP11.22□□□□□ -0.61
PTPN9-206ENST00000618819 CASP8AP2Q9UKL3 1982 aa11.22□□□□□ -0.61
PTPN9-206ENST00000618819 LINC00311Q8N616 119 aa11.22□□□□□ -0.61
PTPN9-206ENST00000618819 PARP14Q460N5 1801 aa11.22□□□□□ -0.61
PTPN9-206ENST00000618819 IGHV1-58A0A0C4DH39 117 aa11.22□□□□□ -0.61
PTPN9-206ENST00000618819 TP73-AS1Q9UF72 201 aa11.22□□□□□ -0.61
PTPN9-206ENST00000618819 GP9P14770 177 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms