RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 NHP2Q9NX24 153 aaKnown RBP8.93□□□□□ -0.98
C11orf54-215ENST00000617482 H3BUX3 64 aa8.92□□□□□ -0.98
C11orf54-215ENST00000617482 OVOL1O14753 267 aa8.92□□□□□ -0.98
C11orf54-215ENST00000617482 FABP2P12104 132 aa8.92□□□□□ -0.98
C11orf54-215ENST00000617482 ASIPP42127 132 aa8.92□□□□□ -0.98
C11orf54-215ENST00000617482 SUMO2P61956 95 aaKnown RBP8.92□□□□□ -0.98
C11orf54-215ENST00000617482 MEGF9Q9H1U4 602 aa8.92□□□□□ -0.98
C11orf54-215ENST00000617482 ABCA2Q9BZC7 2435 aa8.92□□□□□ -0.98
C11orf54-215ENST00000617482 CRIP2P52943 208 aaPredicted RBP8.92□□□□□ -0.98
C11orf54-215ENST00000617482 HERV-K104P63124 156 aa8.92□□□□□ -0.98
C11orf54-215ENST00000617482 CEND1Q8N111 149 aa8.92□□□□□ -0.98
C11orf54-215ENST00000617482 SCGB3A1Q96QR1 104 aa8.92□□□□□ -0.98
C11orf54-215ENST00000617482 DEFB104AQ8WTQ1 72 aa8.91□□□□□ -0.98
C11orf54-215ENST00000617482 RHPN1-AS1Q9BWJ2 59 aa8.91□□□□□ -0.98
C11orf54-215ENST00000617482 SPG11Q96JI7 2443 aa8.91□□□□□ -0.98
C11orf54-215ENST00000617482 H7C1H1 209 aa8.91□□□□□ -0.98
C11orf54-215ENST00000617482 EDN2P20800 178 aa8.91□□□□□ -0.98
C11orf54-215ENST00000617482 PLNP26678 52 aa8.91□□□□□ -0.98
C11orf54-215ENST00000617482 DPH3P1Q9H4G8 78 aa8.91□□□□□ -0.98
C11orf54-215ENST00000617482 UTP20O75691 2785 aaKnown RBP8.9□□□□□ -0.98
C11orf54-215ENST00000617482 CELSR2Q9HCU4 2923 aa8.9□□□□□ -0.98
C11orf54-215ENST00000617482 IGHG2P01859 326 aa8.9□□□□□ -0.98
C11orf54-215ENST00000617482 SCGB1A1P11684 91 aa8.9□□□□□ -0.98
C11orf54-215ENST00000617482 ORMDL2Q53FV1 153 aa8.9□□□□□ -0.99
C11orf54-215ENST00000617482 NEGR1Q7Z3B1 354 aa8.9□□□□□ -0.99
C11orf54-215ENST00000617482 TOMM6Q96B49 74 aa8.9□□□□□ -0.99
C11orf54-215ENST00000617482 USMG5Q96IX5 58 aa8.9□□□□□ -0.99
C11orf54-215ENST00000617482 PIMREGQ9BSJ6 248 aa8.9□□□□□ -0.99
C11orf54-215ENST00000617482 TM2D2Q9BX73 214 aa8.9□□□□□ -0.99
C11orf54-215ENST00000617482 F8VRH5 84 aa8.89□□□□□ -0.99
C11orf54-215ENST00000617482 RNASE3P12724 160 aaKnown RBP8.89□□□□□ -0.99
C11orf54-215ENST00000617482 PHLDA1Q8WV24 401 aaPredicted RBP8.89□□□□□ -0.99
C11orf54-215ENST00000617482 CRYBG3Q68DQ2 2970 aa8.89□□□□□ -0.99
C11orf54-215ENST00000617482 C2orf66Q6UXQ4 117 aa8.89□□□□□ -0.99
C11orf54-215ENST00000617482 OR5A1Q8NGJ0 315 aa8.89□□□□□ -0.99
C11orf54-215ENST00000617482 HIST1H4GQ99525 98 aa8.89□□□□□ -0.99
C11orf54-215ENST00000617482 C20orf78Q9BR46 151 aa8.89□□□□□ -0.99
C11orf54-215ENST00000617482 CSMD2Q7Z408 3487 aa8.89□□□□□ -0.99
C11orf54-215ENST00000617482 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.88□□□□□ -0.992e-7■■■■□ 23.3
C11orf54-215ENST00000617482 TRAV12-1A0A0B4J245 112 aa8.88□□□□□ -0.99
C11orf54-215ENST00000617482 A6NDX4 124 aa8.88□□□□□ -0.99
C11orf54-215ENST00000617482 RNF223E7ERA6 249 aa8.88□□□□□ -0.99
C11orf54-215ENST00000617482 RIPPLY3P57055 190 aa8.88□□□□□ -0.99
C11orf54-215ENST00000617482 FAM19A4Q96LR4 140 aa8.88□□□□□ -0.99
C11orf54-215ENST00000617482 CCL19Q99731 98 aa8.88□□□□□ -0.99
C11orf54-215ENST00000617482 TRAV26-1A0A087WT03 109 aa8.88□□□□□ -0.99
C11orf54-215ENST00000617482 HLA-DRB4P13762 266 aa8.88□□□□□ -0.99
C11orf54-215ENST00000617482 NEXN-AS1Q8NBZ9 246 aa8.88□□□□□ -0.99
C11orf54-215ENST00000617482 JPT2Q9H910 190 aa8.88□□□□□ -0.99
C11orf54-215ENST00000617482 HLA-DRB4X5D2U9 266 aa8.88□□□□□ -0.99
C11orf54-215ENST00000617482 IGHV4-30-2A0A087WSY4 118 aa8.87□□□□□ -0.99
C11orf54-215ENST00000617482 C10orf105Q8TEF2 133 aa8.87□□□□□ -0.99
C11orf54-215ENST00000617482 DAZ1Q9NQZ3 744 aaKnown RBP8.87□□□□□ -0.99
C11orf54-215ENST00000617482 CFAP46Q8IYW2 2715 aa8.87□□□□□ -0.99
C11orf54-215ENST00000617482 PKD1L2Q7Z442 2459 aa8.87□□□□□ -0.99
C11orf54-215ENST00000617482 PRSS29PA6NIE9 313 aa8.86□□□□□ -0.99
C11orf54-215ENST00000617482 G3V4G9 280 aa8.86□□□□□ -0.99
C11orf54-215ENST00000617482 ATP5J2P56134 94 aa8.86□□□□□ -0.99
C11orf54-215ENST00000617482 BAALCQ8WXS3 180 aa8.86□□□□□ -0.99
C11orf54-215ENST00000617482 PRORYQ9H606 182 aa8.86□□□□□ -0.99
C11orf54-215ENST00000617482 OR11H12B2RN74 326 aa8.86□□□□□ -0.99
C11orf54-215ENST00000617482 H3BUA1 57 aa8.86□□□□□ -0.99
C11orf54-215ENST00000617482 ID1P41134 155 aa8.86□□□□□ -0.99
C11orf54-215ENST00000617482 OR11H1Q8NG94 326 aa8.86□□□□□ -0.99
C11orf54-215ENST00000617482 OR11H2Q8NH07 326 aa8.86□□□□□ -0.99
C11orf54-215ENST00000617482 AGRNO00468 2067 aa8.86□□□□□ -0.99
C11orf54-215ENST00000617482 TRAV25A0A0B4J276 109 aa8.85□□□□□ -0.99
C11orf54-215ENST00000617482 MYMXA0A1B0GTQ4 84 aa8.85□□□□□ -0.99
C11orf54-215ENST00000617482 AVPP01185 164 aa8.85□□□□□ -0.99
C11orf54-215ENST00000617482 RPL24P83731 157 aaKnown RBP8.85□□□□□ -0.99
C11orf54-215ENST00000617482 C12orf74Q32Q52 190 aa8.85□□□□□ -0.99
C11orf54-215ENST00000617482 YAE1D1Q9NRH1 226 aa8.85□□□□□ -0.99
C11orf54-215ENST00000617482 FLNCQ14315 2725 aa8.85□□□□□ -0.99
C11orf54-215ENST00000617482 A0A087WWL8 130 aa8.85□□□□□ -0.99
C11orf54-215ENST00000617482 TRAV12-3A0A0B4J271 114 aa8.85□□□□□ -0.99
C11orf54-215ENST00000617482 IGLL5B9A064 214 aa8.85□□□□□ -0.99
C11orf54-215ENST00000617482 IGLV1-40P01703 118 aa8.85□□□□□ -0.99
C11orf54-215ENST00000617482 SLC25A16P16260 332 aa8.85□□□□□ -0.99
C11orf54-215ENST00000617482 FAM159AQ6UWV7 190 aa8.85□□□□□ -0.99
C11orf54-215ENST00000617482 APRG1Q8IVJ8 170 aa8.85□□□□□ -0.99
C11orf54-215ENST00000617482 TRBV7-9A0A0J9YWB2 115 aa8.84□□□□□ -0.99
C11orf54-215ENST00000617482 DUSP14O95147 198 aaKnown RBP8.84□□□□□ -0.99
C11orf54-215ENST00000617482 IGKV3-20P01619 116 aa8.84□□□□□ -0.99
C11orf54-215ENST00000617482 MSMBP08118 114 aa8.84□□□□□ -0.99
C11orf54-215ENST00000617482 MED14OSP0DP75 135 aa8.84□□□□□ -0.99
C11orf54-215ENST00000617482 EMP1P54849 157 aa8.84□□□□□ -0.99
C11orf54-215ENST00000617482 CYSLTR1Q9Y271 337 aa8.84□□□□□ -0.99
C11orf54-215ENST00000617482 CSPG4Q6UVK1 2322 aa8.84□□□□□ -0.99
C11orf54-215ENST00000617482 MUC4Q99102 2169 aa8.84□□□□□ -0.99
C11orf54-215ENST00000617482 F5H697 171 aa8.84□□□□□ -0.99
C11orf54-215ENST00000617482 CD7P09564 240 aa8.84□□□□□ -0.99
C11orf54-215ENST00000617482 LINC00315P59091 139 aa8.84□□□□□ -0.99
C11orf54-215ENST00000617482 C10orf99Q6UWK7 81 aa8.84□□□□□ -0.99
C11orf54-215ENST00000617482 PRADC1Q9BSG0 188 aa8.84□□□□□ -0.99
C11orf54-215ENST00000617482 E9PLD3 99 aa8.83□□□□□ -1
C11orf54-215ENST00000617482 TAL2Q16559 108 aa8.83□□□□□ -1
C11orf54-215ENST00000617482 SAMD13Q5VXD3 122 aa8.83□□□□□ -1
C11orf54-215ENST00000617482 KIF25-AS1Q9Y6Z4 181 aa8.83□□□□□ -1
C11orf54-215ENST00000617482 TRBV7-3A0A075B6L6 115 aa8.83□□□□□ -1
C11orf54-215ENST00000617482 KLLNB2CW77 178 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms