RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 PAX4O43316 350 aa7.86□□□□□ -1.15
SMARCA1-205ENST00000617310 FANCD2OSQ96PS1 177 aa7.86□□□□□ -1.15
SMARCA1-205ENST00000617310 SPAG8Q99932 426 aaPredicted RBP7.86□□□□□ -1.15
SMARCA1-205ENST00000617310 TMEM14CQ9P0S9 112 aa7.86□□□□□ -1.15
SMARCA1-205ENST00000617310 RHODO00212 210 aa7.86□□□□□ -1.15
SMARCA1-205ENST00000617310 TP53TG1Q9Y2A0 90 aa7.86□□□□□ -1.15
SMARCA1-205ENST00000617310 U3KQE9 123 aa7.86□□□□□ -1.15
SMARCA1-205ENST00000617310 LAMA5O15230 3695 aa7.86□□□□□ -1.15
SMARCA1-205ENST00000617310 A0A1W2PPR1 153 aa7.85□□□□□ -1.15
SMARCA1-205ENST00000617310 TNFRSF13BO14836 293 aaPredicted RBP7.85□□□□□ -1.15
SMARCA1-205ENST00000617310 CGB3P0DN86 165 aa7.85□□□□□ -1.15
SMARCA1-205ENST00000617310 CGB7P0DN87 165 aa7.85□□□□□ -1.15
SMARCA1-205ENST00000617310 DLX4Q92988 240 aaPredicted RBP7.85□□□□□ -1.15
SMARCA1-205ENST00000617310 Q9HAA7 133 aa7.85□□□□□ -1.15
SMARCA1-205ENST00000617310 VWC2LB2RUY7 222 aa7.85□□□□□ -1.15
SMARCA1-205ENST00000617310 C9orf66Q5T8R8 295 aa7.85□□□□□ -1.15
SMARCA1-205ENST00000617310 A6NDX4 124 aa7.85□□□□□ -1.15
SMARCA1-205ENST00000617310 EGR2P11161 476 aaPredicted RBP7.85□□□□□ -1.15
SMARCA1-205ENST00000617310 CRIP3Q6Q6R5 217 aa7.85□□□□□ -1.15
SMARCA1-205ENST00000617310 FOXI2Q6ZQN5 318 aa7.84□□□□□ -1.15
SMARCA1-205ENST00000617310 LY6G6DO95868 133 aa7.84□□□□□ -1.15
SMARCA1-205ENST00000617310 C3orf79P0CE67 100 aa7.84□□□□□ -1.15
SMARCA1-205ENST00000617310 SLAQ13239 276 aa7.84□□□□□ -1.15
SMARCA1-205ENST00000617310 FAM104BQ5XKR9 115 aa7.84□□□□□ -1.15
SMARCA1-205ENST00000617310 C2orf66Q6UXQ4 117 aa7.84□□□□□ -1.15
SMARCA1-205ENST00000617310 PLNP26678 52 aa7.84□□□□□ -1.15
SMARCA1-205ENST00000617310 TRPT1Q86TN4 253 aaKnown RBP7.84□□□□□ -1.15
SMARCA1-205ENST00000617310 PRIMA1Q86XR5 153 aa7.84□□□□□ -1.15
SMARCA1-205ENST00000617310 COPS9Q8WXC6 57 aa7.84□□□□□ -1.15
SMARCA1-205ENST00000617310 CHCHD1Q96BP2 118 aaKnown RBP7.84□□□□□ -1.15
SMARCA1-205ENST00000617310 A8MWV9 139 aa7.83□□□□□ -1.16
SMARCA1-205ENST00000617310 C11orf71Q6IPW1 123 aa7.83□□□□□ -1.16
SMARCA1-205ENST00000617310 HIST3H2BBQ8N257 126 aa7.83□□□□□ -1.16
SMARCA1-205ENST00000617310 CFHR4Q92496 578 aa7.83□□□□□ -1.16
SMARCA1-205ENST00000617310 NBEAQ8NFP9 2946 aa7.83□□□□□ -1.16
SMARCA1-205ENST00000617310 TRAV9-2A0A087WT02 112 aa7.83□□□□□ -1.16
SMARCA1-205ENST00000617310 ANGP03950 147 aaKnown RBP7.83□□□□□ -1.16
SMARCA1-205ENST00000617310 BRWD1-AS2P59051 145 aa7.83□□□□□ -1.16
SMARCA1-205ENST00000617310 MRPL51Q4U2R6 128 aaKnown RBP7.83□□□□□ -1.16
SMARCA1-205ENST00000617310 RASL11AQ6T310 242 aa7.83□□□□□ -1.16
SMARCA1-205ENST00000617310 PET117Q6UWS5 81 aa7.83□□□□□ -1.16
SMARCA1-205ENST00000617310 GATA1P15976 413 aaPredicted RBP7.83□□□□□ -1.16
SMARCA1-205ENST00000617310 STPG4Q8N801 248 aa7.83□□□□□ -1.16
SMARCA1-205ENST00000617310 JPT2Q9H910 190 aa7.83□□□□□ -1.16
SMARCA1-205ENST00000617310 LURAP1LQ8IV03 231 aa7.83□□□□□ -1.16
SMARCA1-205ENST00000617310 LY6G5BQ8NDX9 201 aa7.83□□□□□ -1.16
SMARCA1-205ENST00000617310 MSRB1Q9NZV6 116 aa7.83□□□□□ -1.16
SMARCA1-205ENST00000617310 V9GYV3 84 aa7.83□□□□□ -1.16
SMARCA1-205ENST00000617310 TRBV25-1A0A075B6N4 114 aa7.82□□□□□ -1.16
SMARCA1-205ENST00000617310 S100A7L2Q5SY68 101 aa7.82□□□□□ -1.16
SMARCA1-205ENST00000617310 ADAMTSL5Q6ZMM2 481 aa7.82□□□□□ -1.16
SMARCA1-205ENST00000617310 Q6ZQT7 251 aa7.82□□□□□ -1.16
SMARCA1-205ENST00000617310 TMEM86BQ8N661 226 aa7.82□□□□□ -1.16
SMARCA1-205ENST00000617310 ZNF492Q9P255 531 aa7.82□□□□□ -1.16
SMARCA1-205ENST00000617310 PFN2P35080 140 aa7.82□□□□□ -1.16
SMARCA1-205ENST00000617310 MAP1AP78559 2803 aaPredicted RBP7.82□□□□□ -1.16
SMARCA1-205ENST00000617310 NXPH4O95158 308 aa7.82□□□□□ -1.16
SMARCA1-205ENST00000617310 NPYP01303 97 aa7.82□□□□□ -1.16
SMARCA1-205ENST00000617310 PLP1P60201 277 aa7.82□□□□□ -1.16
SMARCA1-205ENST00000617310 C18orf32Q8TCD1 76 aa7.81□□□□□ -1.16
SMARCA1-205ENST00000617310 MRPL53Q96EL3 112 aaKnown RBP7.81□□□□□ -1.16
SMARCA1-205ENST00000617310 MRPS16Q9Y3D3 137 aaKnown RBP7.81□□□□□ -1.16
SMARCA1-205ENST00000617310 PRSS46E5RG02 174 aa7.81□□□□□ -1.16
SMARCA1-205ENST00000617310 H3BUT2 72 aa7.81□□□□□ -1.16
SMARCA1-205ENST00000617310 DEFB125Q8N687 156 aa7.81□□□□□ -1.16
SMARCA1-205ENST00000617310 CRYGCP07315 174 aa7.81□□□□□ -1.16
SMARCA1-205ENST00000617310 SS18Q15532 418 aa7.81□□□□□ -1.16
SMARCA1-205ENST00000617310 PYGO2Q9BRQ0 406 aa7.81□□□□□ -1.16
SMARCA1-205ENST00000617310 CST9LQ9H4G1 147 aa7.81□□□□□ -1.16
SMARCA1-205ENST00000617310 K7EN84 100 aa7.81□□□□□ -1.16
SMARCA1-205ENST00000617310 AVPP01185 164 aa7.81□□□□□ -1.16
SMARCA1-205ENST00000617310 Q6ZSV7 163 aa7.81□□□□□ -1.16
SMARCA1-205ENST00000617310 ODF3BA8MYP8 253 aa7.8□□□□□ -1.16
SMARCA1-205ENST00000617310 HLA-DRB4P13762 266 aa7.8□□□□□ -1.16
SMARCA1-205ENST00000617310 C16orf54Q6UWD8 224 aa7.8□□□□□ -1.16
SMARCA1-205ENST00000617310 LRRC75A-AS1Q8N1F1 130 aa7.8□□□□□ -1.16
SMARCA1-205ENST00000617310 TMEM243Q9BU79 118 aa7.8□□□□□ -1.16
SMARCA1-205ENST00000617310 HLA-DRB4X5D2U9 266 aa7.8□□□□□ -1.16
SMARCA1-205ENST00000617310 A8MWP6 167 aa7.8□□□□□ -1.16
SMARCA1-205ENST00000617310 CRLF1O75462 422 aa7.8□□□□□ -1.16
SMARCA1-205ENST00000617310 MORN3Q6PF18 240 aaPredicted RBP7.8□□□□□ -1.16
SMARCA1-205ENST00000617310 CHAC1Q9BUX1 264 aa7.8□□□□□ -1.16
SMARCA1-205ENST00000617310 LAMTOR2Q9Y2Q5 125 aa7.8□□□□□ -1.16
SMARCA1-205ENST00000617310 H3BMM0 161 aa7.8□□□□□ -1.16
SMARCA1-205ENST00000617310 LBHQ53QV2 105 aaPredicted RBP7.8□□□□□ -1.16
SMARCA1-205ENST00000617310 Q6ZS46 218 aa7.8□□□□□ -1.16
SMARCA1-205ENST00000617310 C11orf52Q96A22 123 aa7.8□□□□□ -1.16
SMARCA1-205ENST00000617310 UBE2WQ96B02 151 aa7.8□□□□□ -1.16
SMARCA1-205ENST00000617310 CCDC140Q96MF4 163 aa7.8□□□□□ -1.16
SMARCA1-205ENST00000617310 VWC2Q2TAL6 325 aa7.79□□□□□ -1.16
SMARCA1-205ENST00000617310 PLA2G2EQ9NZK7 142 aa7.79□□□□□ -1.16
SMARCA1-205ENST00000617310 SMAD5-AS1Q9Y6J3 95 aa7.79□□□□□ -1.16
SMARCA1-205ENST00000617310 IGLV10-54A0A075B6I4 117 aa7.79□□□□□ -1.16
SMARCA1-205ENST00000617310 SYS1-DBNDD2H3BUS1 97 aa7.79□□□□□ -1.16
SMARCA1-205ENST00000617310 ZNF561-AS1K7EIQ3 104 aa7.79□□□□□ -1.16
SMARCA1-205ENST00000617310 GATD1Q8NB37 220 aa7.79□□□□□ -1.16
SMARCA1-205ENST00000617310 FAM167A-AS1Q96KT0 104 aa7.79□□□□□ -1.16
SMARCA1-205ENST00000617310 SVEP1Q4LDE5 3571 aa7.79□□□□□ -1.16
SMARCA1-205ENST00000617310 MGAQ8IWI9 3026 aa7.79□□□□□ -1.16
SMARCA1-205ENST00000617310 A0A1B0GV90 55 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms