RNA–Protein interactions for RNA: ENST00000617039.4

TNFRSF11A-206, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-206ENST00000617039 ZNF625Q96I27 306 aaPredicted RBP11.34□□□□□ -0.59
TNFRSF11A-206ENST00000617039 C20orf173Q96LM9 149 aa11.34□□□□□ -0.59
TNFRSF11A-206ENST00000617039 CYSLTR1Q9Y271 337 aa11.34□□□□□ -0.59
TNFRSF11A-206ENST00000617039 TRGV1A0A0A0MS02 117 aa11.33□□□□□ -0.59
TNFRSF11A-206ENST00000617039 CIDEAO60543 219 aa11.33□□□□□ -0.59
TNFRSF11A-206ENST00000617039 RRN3P1Q2M238 152 aa11.33□□□□□ -0.6
TNFRSF11A-206ENST00000617039 AMMECR1LQ6DCA0 310 aa11.33□□□□□ -0.6
TNFRSF11A-206ENST00000617039 USMG5Q96IX5 58 aa11.33□□□□□ -0.6
TNFRSF11A-206ENST00000617039 MS4A6AQ9H2W1 248 aa11.33□□□□□ -0.6
TNFRSF11A-206ENST00000617039 GAGE10A6NGK3 116 aa11.33□□□□□ -0.6
TNFRSF11A-206ENST00000617039 FAM223BA6NKX1 122 aa11.33□□□□□ -0.6
TNFRSF11A-206ENST00000617039 SLC25A16P16260 332 aa11.33□□□□□ -0.6
TNFRSF11A-206ENST00000617039 FAM223AQ8IWN6 122 aa11.33□□□□□ -0.6
TNFRSF11A-206ENST00000617039 ZNF843Q8N446 348 aa11.33□□□□□ -0.6
TNFRSF11A-206ENST00000617039 MLST8Q9BVC4 326 aa11.33□□□□□ -0.6
TNFRSF11A-206ENST00000617039 ZNF492Q9P255 531 aa11.33□□□□□ -0.6
TNFRSF11A-206ENST00000617039 A0A096LPF7 62 aa11.32□□□□□ -0.6
TNFRSF11A-206ENST00000617039 ADARB2-AS1A8MUL3 147 aa11.32□□□□□ -0.6
TNFRSF11A-206ENST00000617039 OR11H12B2RN74 326 aa11.32□□□□□ -0.6
TNFRSF11A-206ENST00000617039 OR11H2Q8NH07 326 aa11.32□□□□□ -0.6
TNFRSF11A-206ENST00000617039 SRSF8Q9BRL6 282 aaKnown RBP11.32□□□□□ -0.6
TNFRSF11A-206ENST00000617039 IGHV7-4-1A0A0J9YVY3 117 aa11.32□□□□□ -0.6
TNFRSF11A-206ENST00000617039 NDUFS8O00217 210 aa11.32□□□□□ -0.6
TNFRSF11A-206ENST00000617039 DEFB130BP0DP73 79 aa11.32□□□□□ -0.6
TNFRSF11A-206ENST00000617039 DEFB130AP0DP74 79 aa11.32□□□□□ -0.6
TNFRSF11A-206ENST00000617039 LURAP1LQ8IV03 231 aa11.32□□□□□ -0.6
TNFRSF11A-206ENST00000617039 ESM1Q9NQ30 184 aa11.32□□□□□ -0.6
TNFRSF11A-206ENST00000617039 TNFRSF18Q9Y5U5 241 aa11.32□□□□□ -0.6
TNFRSF11A-206ENST00000617039 IGLV2-11P01706 119 aa11.32□□□□□ -0.6
TNFRSF11A-206ENST00000617039 TOMM7Q9P0U1 55 aa11.32□□□□□ -0.6
TNFRSF11A-206ENST00000617039 COL6A5A8TX70 2615 aa11.32□□□□□ -0.6
TNFRSF11A-206ENST00000617039 OVOL1O14753 267 aa11.31□□□□□ -0.6
TNFRSF11A-206ENST00000617039 PSMB2P49721 201 aa11.31□□□□□ -0.6
TNFRSF11A-206ENST00000617039 SMPXQ9UHP9 88 aa11.31□□□□□ -0.6
TNFRSF11A-206ENST00000617039 KLF12Q9Y4X4 402 aa11.31□□□□□ -0.6
TNFRSF11A-206ENST00000617039 C19orf71A6NCJ1 209 aa11.31□□□□□ -0.6
TNFRSF11A-206ENST00000617039 CHCHD1Q96BP2 118 aaKnown RBP11.31□□□□□ -0.6
TNFRSF11A-206ENST00000617039 ST20Q9HBF5 79 aa11.31□□□□□ -0.6
TNFRSF11A-206ENST00000617039 MRPL35Q9NZE8 188 aaKnown RBP11.31□□□□□ -0.6
TNFRSF11A-206ENST00000617039 PLP1P60201 277 aa11.31□□□□□ -0.6
TNFRSF11A-206ENST00000617039 NUTF2P61970 127 aaKnown RBP11.31□□□□□ -0.6
TNFRSF11A-206ENST00000617039 COA6Q5JTJ3 125 aaKnown RBP11.31□□□□□ -0.6
TNFRSF11A-206ENST00000617039 SYT8Q8NBV8 401 aa11.31□□□□□ -0.6
TNFRSF11A-206ENST00000617039 MDFICQ9P1T7 246 aa11.31□□□□□ -0.6
TNFRSF11A-206ENST00000617039 C11orf21Q9P2W6 132 aa11.31□□□□□ -0.6
TNFRSF11A-206ENST00000617039 DEFB113Q30KQ7 82 aa11.3□□□□□ -0.6
TNFRSF11A-206ENST00000617039 ANKRD39Q53RE8 183 aa11.3□□□□□ -0.6
TNFRSF11A-206ENST00000617039 NIPBLQ6KC79 2804 aaeCLIP11.3□□□□□ -0.6
TNFRSF11A-206ENST00000617039 F8W735 103 aaPredicted RBP11.3□□□□□ -0.6
TNFRSF11A-206ENST00000617039 NDUFA4O00483 81 aa11.3□□□□□ -0.6
TNFRSF11A-206ENST00000617039 TMEM262E9PQX1 116 aa11.3□□□□□ -0.6
TNFRSF11A-206ENST00000617039 LAGE3Q14657 143 aa11.3□□□□□ -0.6
TNFRSF11A-206ENST00000617039 C12orf54Q6X4T0 127 aa11.3□□□□□ -0.6
TNFRSF11A-206ENST00000617039 C11orf68Q9H3H3 251 aaKnown RBP11.3□□□□□ -0.6
TNFRSF11A-206ENST00000617039 K7EP13 123 aa11.29□□□□□ -0.6
TNFRSF11A-206ENST00000617039 MRPL16Q9NX20 251 aaKnown RBP11.29□□□□□ -0.6
TNFRSF11A-206ENST00000617039 PRR9Q5T870 116 aa11.29□□□□□ -0.6
TNFRSF11A-206ENST00000617039 OPRPNQ99935 248 aaPredicted RBP11.29□□□□□ -0.6
TNFRSF11A-206ENST00000617039 SPOCK3Q9BQ16 436 aa11.29□□□□□ -0.6
TNFRSF11A-206ENST00000617039 VPREB3Q9UKI3 123 aa11.29□□□□□ -0.6
TNFRSF11A-206ENST00000617039 K7ERJ3 54 aa11.28□□□□□ -0.6
TNFRSF11A-206ENST00000617039 RPL39P62891 51 aaKnown RBP11.28□□□□□ -0.6
TNFRSF11A-206ENST00000617039 P0DMU3 169 aa11.28□□□□□ -0.6
TNFRSF11A-206ENST00000617039 FAM231AP0DMU4 169 aa11.28□□□□□ -0.6
TNFRSF11A-206ENST00000617039 FAM231CP0DMU5 169 aa11.28□□□□□ -0.6
TNFRSF11A-206ENST00000617039 IGKCP01834 107 aa11.28□□□□□ -0.6
TNFRSF11A-206ENST00000617039 PET117Q6UWS5 81 aa11.28□□□□□ -0.6
TNFRSF11A-206ENST00000617039 SPATA12Q7Z6I5 190 aa11.28□□□□□ -0.6
TNFRSF11A-206ENST00000617039 ZNF418Q8TF45 676 aaPredicted RBP11.28□□□□□ -0.6
TNFRSF11A-206ENST00000617039 ZNF747Q9BV97 191 aa11.28□□□□□ -0.6
TNFRSF11A-206ENST00000617039 NXT2Q9NPJ8 142 aaKnown RBP11.28□□□□□ -0.6
TNFRSF11A-206ENST00000617039 INS-IGF2F8WCM5 200 aa11.27□□□□□ -0.6
TNFRSF11A-206ENST00000617039 DEFB4AO15263 64 aa11.27□□□□□ -0.6
TNFRSF11A-206ENST00000617039 CRXO43186 299 aaPredicted RBP11.27□□□□□ -0.61
TNFRSF11A-206ENST00000617039 SPXQ9BT56 116 aa11.27□□□□□ -0.61
TNFRSF11A-206ENST00000617039 DPH3P1Q9H4G8 78 aa11.27□□□□□ -0.61
TNFRSF11A-206ENST00000617039 TP53TG1Q9Y2A0 90 aa11.27□□□□□ -0.61
TNFRSF11A-206ENST00000617039 IGHG2P01859 326 aa11.27□□□□□ -0.61
TNFRSF11A-206ENST00000617039 MYCNOSP40205 109 aa11.27□□□□□ -0.61
TNFRSF11A-206ENST00000617039 C2orf66Q6UXQ4 117 aa11.27□□□□□ -0.61
TNFRSF11A-206ENST00000617039 TMEM61Q8N0U2 210 aa11.27□□□□□ -0.61
TNFRSF11A-206ENST00000617039 ZFAND3Q9H8U3 227 aa11.27□□□□□ -0.61
TNFRSF11A-206ENST00000617039 SUMO2P61956 95 aaKnown RBP11.26□□□□□ -0.61
TNFRSF11A-206ENST00000617039 GFRA4Q9GZZ7 299 aa11.26□□□□□ -0.61
TNFRSF11A-206ENST00000617039 SDHAF1A6NFY7 115 aa11.26□□□□□ -0.61
TNFRSF11A-206ENST00000617039 DPM2O94777 84 aa11.26□□□□□ -0.61
TNFRSF11A-206ENST00000617039 CHTOPQ9Y3Y2 248 aaKnown RBP11.26□□□□□ -0.61
TNFRSF11A-206ENST00000617039 RASL11AQ6T310 242 aa11.26□□□□□ -0.61
TNFRSF11A-206ENST00000617039 TEX43Q6ZNM6 134 aa11.26□□□□□ -0.61
TNFRSF11A-206ENST00000617039 TMEM190Q8WZ59 177 aa11.26□□□□□ -0.61
TNFRSF11A-206ENST00000617039 A6NDN8 102 aa11.25□□□□□ -0.61
TNFRSF11A-206ENST00000617039 J3QKU1 62 aa11.25□□□□□ -0.61
TNFRSF11A-206ENST00000617039 CT83Q5H943 113 aa11.25□□□□□ -0.61
TNFRSF11A-206ENST00000617039 CEMP1Q6PRD7 247 aaPredicted RBP11.25□□□□□ -0.61
TNFRSF11A-206ENST00000617039 TRAV13-1A0A0B4J241 112 aa11.25□□□□□ -0.61
TNFRSF11A-206ENST00000617039 ZNF815PA8K554 130 aa11.25□□□□□ -0.61
TNFRSF11A-206ENST00000617039 DSCR9P59020 149 aa11.25□□□□□ -0.61
TNFRSF11A-206ENST00000617039 WFDC10AQ9H1F0 79 aa11.25□□□□□ -0.61
TNFRSF11A-206ENST00000617039 C16orf54Q6UWD8 224 aa11.24□□□□□ -0.61
TNFRSF11A-206ENST00000617039 Q8N1Y9 231 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms