RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 NUP37Q8NFH4 326 aa10.13□□□□□ -0.79
MSH6-214ENST00000616033 DLX4Q92988 240 aaPredicted RBP10.13□□□□□ -0.79
MSH6-214ENST00000616033 ZMAT4Q9H898 229 aa10.13□□□□□ -0.79
MSH6-214ENST00000616033 TRBV6-1A0A0K0K1D8 114 aa10.13□□□□□ -0.79
MSH6-214ENST00000616033 H7C1H1 209 aa10.13□□□□□ -0.79
MSH6-214ENST00000616033 LGALS1P09382 135 aaKnown RBP10.13□□□□□ -0.79
MSH6-214ENST00000616033 ZNF575Q86XF7 245 aa10.13□□□□□ -0.79
MSH6-214ENST00000616033 F8VRH5 84 aa10.12□□□□□ -0.79
MSH6-214ENST00000616033 F5H697 171 aa10.12□□□□□ -0.79
MSH6-214ENST00000616033 G3V318 75 aa10.12□□□□□ -0.79
MSH6-214ENST00000616033 F8W735 103 aaPredicted RBP10.11□□□□□ -0.79
MSH6-214ENST00000616033 Q1RN00 199 aa10.11□□□□□ -0.79
MSH6-214ENST00000616033 CARD19Q96LW7 228 aa10.11□□□□□ -0.79
MSH6-214ENST00000616033 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.11□□□□□ -0.79
MSH6-214ENST00000616033 NHLRC4P0CG21 123 aaPredicted RBP10.11□□□□□ -0.79
MSH6-214ENST00000616033 C16orf92Q96LL3 132 aa10.11□□□□□ -0.79
MSH6-214ENST00000616033 ZFHX3Q15911 3703 aa10.11□□□□□ -0.79
MSH6-214ENST00000616033 TRBV7-3A0A075B6L6 115 aa10.1□□□□□ -0.79
MSH6-214ENST00000616033 SRD5A1P18405 259 aa10.1□□□□□ -0.79
MSH6-214ENST00000616033 PLNP26678 52 aa10.1□□□□□ -0.79
MSH6-214ENST00000616033 NDUFV3P56181 108 aaKnown RBP10.1□□□□□ -0.79
MSH6-214ENST00000616033 C2orf66Q6UXQ4 117 aa10.1□□□□□ -0.79
MSH6-214ENST00000616033 FAM110AQ9BQ89 295 aa10.1□□□□□ -0.79
MSH6-214ENST00000616033 PRO0461Q9UI25 63 aa10.1□□□□□ -0.79
MSH6-214ENST00000616033 PHLDA3Q9Y5J5 127 aa10.1□□□□□ -0.79
MSH6-214ENST00000616033 IGLV11-55A0A075B6I3 123 aa10.1□□□□□ -0.79
MSH6-214ENST00000616033 ANKRD29Q8N6D5 301 aa10.1□□□□□ -0.79
MSH6-214ENST00000616033 CHCHD5Q9BSY4 110 aa10.1□□□□□ -0.79
MSH6-214ENST00000616033 NRACQ8N912 160 aa10.1□□□□□ -0.79
MSH6-214ENST00000616033 C9JAW5 83 aa10.09□□□□□ -0.79
MSH6-214ENST00000616033 F6UB75 175 aa10.09□□□□□ -0.79
MSH6-214ENST00000616033 IGHV4-39P01824 125 aa10.09□□□□□ -0.79
MSH6-214ENST00000616033 GRNP28799 593 aaKnown RBP10.09□□□□□ -0.79
MSH6-214ENST00000616033 FAM74A4Q5TZK3 123 aa10.09□□□□□ -0.79
MSH6-214ENST00000616033 FAM57AQ8TBR7 257 aa10.09□□□□□ -0.79
MSH6-214ENST00000616033 IGHV3OR16-10A0A075B7F0 116 aa10.09□□□□□ -0.79
MSH6-214ENST00000616033 DUSP14O95147 198 aaKnown RBP10.09□□□□□ -0.79
MSH6-214ENST00000616033 SMIM2Q9BVW6 85 aa10.09□□□□□ -0.79
MSH6-214ENST00000616033 PIEZO1Q92508 2521 aa10.08□□□□□ -0.8
MSH6-214ENST00000616033 IGLV2-18A0A075B6J9 118 aa10.08□□□□□ -0.8
MSH6-214ENST00000616033 IGFL2Q6UWQ7 119 aa10.08□□□□□ -0.8
MSH6-214ENST00000616033 TCL1BO95988 128 aa10.08□□□□□ -0.8
MSH6-214ENST00000616033 IFITM1P13164 125 aa10.08□□□□□ -0.8
MSH6-214ENST00000616033 RPL39P62891 51 aaKnown RBP10.08□□□□□ -0.8
MSH6-214ENST00000616033 A8MWV9 139 aa10.08□□□□□ -0.8
MSH6-214ENST00000616033 SUMO2P61956 95 aaKnown RBP10.08□□□□□ -0.8
MSH6-214ENST00000616033 PRR9Q5T870 116 aa10.08□□□□□ -0.8
MSH6-214ENST00000616033 Q6ZS46 218 aa10.08□□□□□ -0.8
MSH6-214ENST00000616033 TRPT1Q86TN4 253 aaKnown RBP10.08□□□□□ -0.8
MSH6-214ENST00000616033 KLK5Q9Y337 293 aaPredicted RBP10.08□□□□□ -0.8
MSH6-214ENST00000616033 SHISA9B4DS77 424 aa10.07□□□□□ -0.8
MSH6-214ENST00000616033 TNFRSF13BO14836 293 aaPredicted RBP10.07□□□□□ -0.8
MSH6-214ENST00000616033 GNRH2O43555 120 aa10.07□□□□□ -0.8
MSH6-214ENST00000616033 CD3EP07766 207 aa10.07□□□□□ -0.8
MSH6-214ENST00000616033 RNASE4P34096 147 aaKnown RBP10.07□□□□□ -0.8
MSH6-214ENST00000616033 ZNF672Q499Z4 452 aaPredicted RBP10.07□□□□□ -0.8
MSH6-214ENST00000616033 C8orf31Q8N9H6 132 aa10.07□□□□□ -0.8
MSH6-214ENST00000616033 PPDPFLQ8WWR9 84 aa10.07□□□□□ -0.8
MSH6-214ENST00000616033 A0A087WWL8 130 aa10.07□□□□□ -0.8
MSH6-214ENST00000616033 ZNF688P0C7X2 276 aa10.07□□□□□ -0.8
MSH6-214ENST00000616033 NPC2P61916 151 aa10.07□□□□□ -0.8
MSH6-214ENST00000616033 CFAP126Q5VTH2 177 aa10.07□□□□□ -0.8
MSH6-214ENST00000616033 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.07□□□□□ -0.8
MSH6-214ENST00000616033 JPT2Q9H910 190 aa10.07□□□□□ -0.8
MSH6-214ENST00000616033 Q6ZS92 163 aa10.07□□□□□ -0.8
MSH6-214ENST00000616033 KAAG1Q9UBP8 84 aa10.07□□□□□ -0.8
MSH6-214ENST00000616033 ZNF256Q9Y2P7 627 aaPredicted RBP10.07□□□□□ -0.8
MSH6-214ENST00000616033 IGKV3-20P01619 116 aa10.06□□□□□ -0.8
MSH6-214ENST00000616033 BAALCQ8WXS3 180 aa10.06□□□□□ -0.8
MSH6-214ENST00000616033 VPREB3Q9UKI3 123 aa10.06□□□□□ -0.8
MSH6-214ENST00000616033 TRAV2A0A0B4J234 112 aa10.06□□□□□ -0.8
MSH6-214ENST00000616033 ADARB2-AS1A8MUL3 147 aa10.06□□□□□ -0.8
MSH6-214ENST00000616033 LINC01559Q495D7 138 aa10.06□□□□□ -0.8
MSH6-214ENST00000616033 OPRPNQ99935 248 aaPredicted RBP10.06□□□□□ -0.8
MSH6-214ENST00000616033 IGHV7-4-1A0A0J9YVY3 117 aa10.05□□□□□ -0.8
MSH6-214ENST00000616033 RS1O15537 224 aa10.05□□□□□ -0.8
MSH6-214ENST00000616033 NTN5Q8WTR8 489 aaPredicted RBP10.05□□□□□ -0.8
MSH6-214ENST00000616033 BSNQ9UPA5 3926 aa10.05□□□□□ -0.8
MSH6-214ENST00000616033 C11orf86A6NJI1 115 aa10.05□□□□□ -0.8
MSH6-214ENST00000616033 TMEM262E9PQX1 116 aa10.05□□□□□ -0.8
MSH6-214ENST00000616033 BUB3O43684 328 aa10.05□□□□□ -0.8
MSH6-214ENST00000616033 CRIP2P52943 208 aaPredicted RBP10.05□□□□□ -0.8
MSH6-214ENST00000616033 TMEM219Q86XT9 240 aa10.05□□□□□ -0.8
MSH6-214ENST00000616033 RASL10AQ92737 203 aa10.05□□□□□ -0.8
MSH6-214ENST00000616033 TNFRSF18Q9Y5U5 241 aa10.05□□□□□ -0.8
MSH6-214ENST00000616033 C15orf53Q8NAA6 179 aa10.05□□□□□ -0.8
MSH6-214ENST00000616033 MSRB2Q9Y3D2 182 aa10.05□□□□□ -0.8
MSH6-214ENST00000616033 NBL1P41271 181 aa10.04□□□□□ -0.8
MSH6-214ENST00000616033 TAL2Q16559 108 aa10.04□□□□□ -0.8
MSH6-214ENST00000616033 TP53TG1Q9Y2A0 90 aa10.04□□□□□ -0.8
MSH6-214ENST00000616033 IGHV3-11P01762 117 aa10.04□□□□□ -0.8
MSH6-214ENST00000616033 ATP6V0E1O15342 81 aa10.04□□□□□ -0.8
MSH6-214ENST00000616033 PRSS2P07478 247 aa10.04□□□□□ -0.8
MSH6-214ENST00000616033 PIFOQ8TCI5 191 aa10.04□□□□□ -0.8
MSH6-214ENST00000616033 ORMDL2Q53FV1 153 aa10.03□□□□□ -0.8
MSH6-214ENST00000616033 VMO1Q7Z5L0 202 aa10.03□□□□□ -0.8
MSH6-214ENST00000616033 METTL26Q96S19 204 aa10.03□□□□□ -0.8
MSH6-214ENST00000616033 IGHV7-81A0A0B4J1V7 117 aa10.03□□□□□ -0.8
MSH6-214ENST00000616033 HTN1P15515 57 aa10.03□□□□□ -0.8
MSH6-214ENST00000616033 TEN1Q86WV5 123 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms