RNA–Protein interactions for RNA: ENST00000612778.4

MUC1-225, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 1,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-225ENST00000612778 ATP5L2Q7Z4Y8 100 aa10.06□□□□□ -0.8
MUC1-225ENST00000612778 C20orf144Q9BQM9 153 aa10.06□□□□□ -0.8
MUC1-225ENST00000612778 SSBP4Q9BWG4 385 aaPredicted RBP10.06□□□□□ -0.8
MUC1-225ENST00000612778 F2Z2F3 143 aa10.05□□□□□ -0.8
MUC1-225ENST00000612778 H3BVH4 76 aa10.05□□□□□ -0.8
MUC1-225ENST00000612778 S100A4P26447 101 aaKnown RBP10.05□□□□□ -0.8
MUC1-225ENST00000612778 TMEM18Q96B42 140 aa10.05□□□□□ -0.8
MUC1-225ENST00000612778 TIMM8BQ9Y5J9 83 aaPredicted RBP10.05□□□□□ -0.8
MUC1-225ENST00000612778 DNHD1Q96M86 4753 aa10.05□□□□□ -0.8
MUC1-225ENST00000612778 PRM2P04554 102 aa10.05□□□□□ -0.8
MUC1-225ENST00000612778 OR5AL1P0C617 328 aa10.05□□□□□ -0.8
MUC1-225ENST00000612778 RNASE3P12724 160 aaKnown RBP10.05□□□□□ -0.8
MUC1-225ENST00000612778 HTN1P15515 57 aa10.05□□□□□ -0.8
MUC1-225ENST00000612778 HBBP68871 147 aa10.05□□□□□ -0.8
MUC1-225ENST00000612778 RIGQ13278 110 aa10.05□□□□□ -0.8
MUC1-225ENST00000612778 WDR73Q6P4I2 378 aa10.05□□□□□ -0.8
MUC1-225ENST00000612778 TMEM136Q6ZRR5 245 aa10.05□□□□□ -0.8
MUC1-225ENST00000612778 C1orf158Q8N1D5 194 aa10.05□□□□□ -0.8
MUC1-225ENST00000612778 BORCS7Q96B45 105 aa10.05□□□□□ -0.8
MUC1-225ENST00000612778 LINC01587Q99440 93 aa10.05□□□□□ -0.8
MUC1-225ENST00000612778 GNB1LQ9BYB4 327 aa10.05□□□□□ -0.8
MUC1-225ENST00000612778 CBY3A6NI87 242 aa10.04□□□□□ -0.8
MUC1-225ENST00000612778 SPRY2O43597 315 aa10.04□□□□□ -0.8
MUC1-225ENST00000612778 SNAI2O43623 268 aa10.04□□□□□ -0.8
MUC1-225ENST00000612778 MT-ND6P03923 174 aa10.04□□□□□ -0.8
MUC1-225ENST00000612778 RAB4BP61018 213 aa10.04□□□□□ -0.8
MUC1-225ENST00000612778 RASL11AQ6T310 242 aa10.04□□□□□ -0.8
MUC1-225ENST00000612778 OR10AG1Q8NH19 301 aa10.04□□□□□ -0.8
MUC1-225ENST00000612778 CNFNQ9BYD5 112 aa10.04□□□□□ -0.8
MUC1-225ENST00000612778 CSTL1Q9H114 145 aa10.04□□□□□ -0.8
MUC1-225ENST00000612778 MDFICQ9P1T7 246 aa10.04□□□□□ -0.8
MUC1-225ENST00000612778 IGHV3-16A0A0C4DH30 117 aa10.03□□□□□ -0.8
MUC1-225ENST00000612778 SNURFLB1AK76 121 aa10.03□□□□□ -0.8
MUC1-225ENST00000612778 NTF3P20783 257 aa10.03□□□□□ -0.8
MUC1-225ENST00000612778 SAMD5Q5TGI4 173 aa10.03□□□□□ -0.8
MUC1-225ENST00000612778 CSNK1G2-AS1Q8NCQ2 148 aa10.03□□□□□ -0.8
MUC1-225ENST00000612778 TMEM208Q9BTX3 173 aa10.03□□□□□ -0.8
MUC1-225ENST00000612778 C1QTNF4Q9BXJ3 329 aa10.03□□□□□ -0.8
MUC1-225ENST00000612778 MRPL18Q9H0U6 180 aaKnown RBP10.03□□□□□ -0.8
MUC1-225ENST00000612778 MSRB1Q9NZV6 116 aa10.03□□□□□ -0.8
MUC1-225ENST00000612778 IGHV3OR16-12A0A075B7B8 117 aa10.03□□□□□ -0.8
MUC1-225ENST00000612778 LOC102724200A0A096LPH7 203 aaPredicted RBP10.03□□□□□ -0.8
MUC1-225ENST00000612778 TWIST1Q15672 202 aa10.03□□□□□ -0.8
MUC1-225ENST00000612778 LINC00467Q9BRT7 94 aa10.03□□□□□ -0.8
MUC1-225ENST00000612778 SCRT2Q9NQ03 307 aa10.03□□□□□ -0.8
MUC1-225ENST00000612778 A0A1B0GW15 77 aa10.02□□□□□ -0.81
MUC1-225ENST00000612778 MED14OSP0DP75 135 aa10.02□□□□□ -0.81
MUC1-225ENST00000612778 JOSD1Q15040 202 aaPredicted RBP10.02□□□□□ -0.81
MUC1-225ENST00000612778 TMEM256Q8N2U0 113 aa10.02□□□□□ -0.81
MUC1-225ENST00000612778 TRGV11A0A075B6L2 103 aa10.01□□□□□ -0.81
MUC1-225ENST00000612778 IGHV4-30-4P0DP06 118 aa10.01□□□□□ -0.81
MUC1-225ENST00000612778 SPANXN1Q5VSR9 72 aa10.01□□□□□ -0.81
MUC1-225ENST00000612778 PHLDA3Q9Y5J5 127 aa10.01□□□□□ -0.81
MUC1-225ENST00000612778 IGHV4-4A0A075B6R2 117 aa10□□□□□ -0.81
MUC1-225ENST00000612778 HLA-DQA1P01909 254 aa10□□□□□ -0.81
MUC1-225ENST00000612778 C9orf85Q96MD7 179 aa10□□□□□ -0.81
MUC1-225ENST00000612778 GOLT1BQ9Y3E0 138 aa10□□□□□ -0.81
MUC1-225ENST00000612778 M0R381 172 aa10□□□□□ -0.81
MUC1-225ENST00000612778 AZU1P20160 251 aa10□□□□□ -0.81
MUC1-225ENST00000612778 CACNG7P62955 275 aa10□□□□□ -0.81
MUC1-225ENST00000612778 SLAQ13239 276 aa10□□□□□ -0.81
MUC1-225ENST00000612778 KIR2DL5BA0A0G2JN68 375 aa9.99□□□□□ -0.81
MUC1-225ENST00000612778 KIR2DL5BA0A0G2JPC4 375 aa9.99□□□□□ -0.81
MUC1-225ENST00000612778 Q0VG73 95 aa9.99□□□□□ -0.81
MUC1-225ENST00000612778 DMRTA1Q5VZB9 504 aa9.99□□□□□ -0.81
MUC1-225ENST00000612778 ZNF705AQ6ZN79 300 aaPredicted RBP9.99□□□□□ -0.81
MUC1-225ENST00000612778 KIR2DL5AQ8N109 375 aa9.99□□□□□ -0.81
MUC1-225ENST00000612778 GATD1Q8NB37 220 aa9.99□□□□□ -0.81
MUC1-225ENST00000612778 KIR2DL5BQ8NHK3 375 aa9.99□□□□□ -0.81
MUC1-225ENST00000612778 MGAM2Q2M2H8 2515 aa9.98□□□□□ -0.81
MUC1-225ENST00000612778 LINC00587B1AMM8 73 aa9.98□□□□□ -0.81
MUC1-225ENST00000612778 APCSP02743 223 aa9.98□□□□□ -0.81
MUC1-225ENST00000612778 APOC4P55056 127 aa9.98□□□□□ -0.81
MUC1-225ENST00000612778 KIAA1644Q3SXP7 199 aa9.98□□□□□ -0.81
MUC1-225ENST00000612778 ZNF493Q6ZR52 646 aa9.98□□□□□ -0.81
MUC1-225ENST00000612778 C11orf72Q8NBR9 251 aa9.98□□□□□ -0.81
MUC1-225ENST00000612778 NOTCH1P46531 2555 aa9.98□□□□□ -0.81
MUC1-225ENST00000612778 DNAH3Q8TD57 4116 aa9.98□□□□□ -0.81
MUC1-225ENST00000612778 NBEAL1Q6ZS30 2694 aa9.97□□□□□ -0.81
MUC1-225ENST00000612778 NXPH4O95158 308 aa9.97□□□□□ -0.81
MUC1-225ENST00000612778 ESDP10768 282 aa9.97□□□□□ -0.81
MUC1-225ENST00000612778 EVI2AP22794 236 aa9.97□□□□□ -0.81
MUC1-225ENST00000612778 TMEM191AQ9H0A3 160 aa9.97□□□□□ -0.81
MUC1-225ENST00000612778 NUPR1O60356 82 aa9.96□□□□□ -0.81
MUC1-225ENST00000612778 PKIAP61925 76 aa9.96□□□□□ -0.81
MUC1-225ENST00000612778 ZNF415Q09FC8 603 aa9.96□□□□□ -0.81
MUC1-225ENST00000612778 OR10J3Q5JRS4 329 aa9.96□□□□□ -0.81
MUC1-225ENST00000612778 CDPF1Q6NVV7 123 aa9.96□□□□□ -0.81
MUC1-225ENST00000612778 BAGE3Q86Y29 109 aa9.96□□□□□ -0.81
MUC1-225ENST00000612778 RNASE8Q8TDE3 154 aaKnown RBP9.96□□□□□ -0.81
MUC1-225ENST00000612778 FAM104BQ5XKR9 115 aa9.96□□□□□ -0.82
MUC1-225ENST00000612778 AMN1Q8IY45 258 aa9.96□□□□□ -0.82
MUC1-225ENST00000612778 RCHY1Q96PM5 261 aa9.96□□□□□ -0.82
MUC1-225ENST00000612778 MUC4Q99102 2169 aa9.95□□□□□ -0.82
MUC1-225ENST00000612778 A8MZ25 164 aa9.95□□□□□ -0.82
MUC1-225ENST00000612778 TSTD3H0UI37 97 aa9.95□□□□□ -0.82
MUC1-225ENST00000612778 IQCJQ1A5X6 159 aa9.95□□□□□ -0.82
MUC1-225ENST00000612778 ZNF876PQ49A33 203 aa9.95□□□□□ -0.82
MUC1-225ENST00000612778 TMEM263Q8WUH6 116 aaKnown RBP9.95□□□□□ -0.82
MUC1-225ENST00000612778 NBEAL2Q6ZNJ1 2754 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms