RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 C6orf223Q8N319 242 aa9.25□□□□□ -0.93
SENP3-209ENST00000610454 IGKV3D-20A0A0C4DH25 116 aa9.24□□□□□ -0.93
SENP3-209ENST00000610454 K7EQD1 137 aa9.24□□□□□ -0.93
SENP3-209ENST00000610454 SIVA1O15304 175 aa9.24□□□□□ -0.93
SENP3-209ENST00000610454 NXPH4O95158 308 aa9.24□□□□□ -0.93
SENP3-209ENST00000610454 IFNA1P01562 189 aa9.24□□□□□ -0.93
SENP3-209ENST00000610454 SULT1A2P50226 295 aa9.24□□□□□ -0.93
SENP3-209ENST00000610454 COX8CQ7Z4L0 72 aa9.24□□□□□ -0.93
SENP3-209ENST00000610454 SH2D6Q7Z4S9 175 aa9.24□□□□□ -0.93
SENP3-209ENST00000610454 NHLRC2Q8NBF2 726 aa9.24□□□□□ -0.93
SENP3-209ENST00000610454 SYT8Q8NBV8 401 aa9.24□□□□□ -0.93
SENP3-209ENST00000610454 PTH2Q96A98 100 aa9.24□□□□□ -0.93
SENP3-209ENST00000610454 PRADC1Q9BSG0 188 aa9.24□□□□□ -0.93
SENP3-209ENST00000610454 DNAH10Q8IVF4 4471 aa9.23□□□□□ -0.93
SENP3-209ENST00000610454 TRAV1-1A0A0B4J248 108 aa9.23□□□□□ -0.93
SENP3-209ENST00000610454 A0A1W2PPQ1 181 aa9.23□□□□□ -0.93
SENP3-209ENST00000610454 PGPEP1LA6NFU8 196 aa9.23□□□□□ -0.93
SENP3-209ENST00000610454 A8MWV9 139 aa9.23□□□□□ -0.93
SENP3-209ENST00000610454 H3BVH4 76 aa9.23□□□□□ -0.93
SENP3-209ENST00000610454 RS1O15537 224 aa9.23□□□□□ -0.93
SENP3-209ENST00000610454 RHOHQ15669 191 aa9.23□□□□□ -0.93
SENP3-209ENST00000610454 CFAP126Q5VTH2 177 aa9.23□□□□□ -0.93
SENP3-209ENST00000610454 LYPD5Q6UWN5 251 aa9.23□□□□□ -0.93
SENP3-209ENST00000610454 BAGE2Q86Y30 109 aa9.23□□□□□ -0.93
SENP3-209ENST00000610454 IL36BQ9NZH7 164 aa9.23□□□□□ -0.93
SENP3-209ENST00000610454 TMSB15BA0A087X1C1 80 aa9.22□□□□□ -0.93
SENP3-209ENST00000610454 IGHV3-73A0A0B4J1V6 119 aa9.22□□□□□ -0.93
SENP3-209ENST00000610454 GRIFINA4D1Z8 144 aa9.22□□□□□ -0.93
SENP3-209ENST00000610454 KRBOX1C9JBD0 128 aa9.22□□□□□ -0.93
SENP3-209ENST00000610454 MGST1P10620 155 aaKnown RBP9.22□□□□□ -0.93
SENP3-209ENST00000610454 GATA1P15976 413 aaPredicted RBP9.22□□□□□ -0.93
SENP3-209ENST00000610454 ZNF674Q2M3X9 581 aa9.22□□□□□ -0.93
SENP3-209ENST00000610454 PHLDA3Q9Y5J5 127 aa9.22□□□□□ -0.93
SENP3-209ENST00000610454 TRBV6-4A0A1B0GX49 114 aa9.21□□□□□ -0.94
SENP3-209ENST00000610454 ARMS2P0C7Q2 107 aa9.21□□□□□ -0.94
SENP3-209ENST00000610454 CRIP1P50238 77 aa9.21□□□□□ -0.94
SENP3-209ENST00000610454 LINC01559Q495D7 138 aa9.21□□□□□ -0.94
SENP3-209ENST00000610454 PIK3CD-AS1Q5SR53 167 aa9.21□□□□□ -0.94
SENP3-209ENST00000610454 HECTD4Q9Y4D8 3996 aa9.21□□□□□ -0.94
SENP3-209ENST00000610454 TRAV9-2A0A087WT02 112 aa9.2□□□□□ -0.94
SENP3-209ENST00000610454 LOC100131303A0A0U1RQF7 123 aa9.2□□□□□ -0.94
SENP3-209ENST00000610454 RPL35P42766 123 aaKnown RBP9.2□□□□□ -0.94
SENP3-209ENST00000610454 CCL20P78556 96 aa9.2□□□□□ -0.94
SENP3-209ENST00000610454 DNLZQ5SXM8 178 aa9.2□□□□□ -0.94
SENP3-209ENST00000610454 PRR27Q6MZM9 219 aa9.2□□□□□ -0.94
SENP3-209ENST00000610454 SLC25A29Q8N8R3 303 aa9.2□□□□□ -0.94
SENP3-209ENST00000610454 RHODO00212 210 aa9.19□□□□□ -0.94
SENP3-209ENST00000610454 PDE6DO43924 150 aa9.19□□□□□ -0.94
SENP3-209ENST00000610454 BTF3P20290 206 aaKnown RBP9.19□□□□□ -0.94
SENP3-209ENST00000610454 MEF2BQ02080 365 aaPredicted RBP9.19□□□□□ -0.94
SENP3-209ENST00000610454 ZFP2Q6ZN57 461 aa9.19□□□□□ -0.94
SENP3-209ENST00000610454 ZFP82Q8N141 532 aa9.19□□□□□ -0.94
SENP3-209ENST00000610454 C9orf62Q8N4C0 152 aa9.19□□□□□ -0.94
SENP3-209ENST00000610454 C11orf52Q96A22 123 aa9.19□□□□□ -0.94
SENP3-209ENST00000610454 PARLQ9H300 379 aa9.19□□□□□ -0.94
SENP3-209ENST00000610454 LY96Q9Y6Y9 160 aa9.19□□□□□ -0.94
SENP3-209ENST00000610454 A0A1B0GVY2 172 aa9.18□□□□□ -0.94
SENP3-209ENST00000610454 M0R381 172 aa9.18□□□□□ -0.94
SENP3-209ENST00000610454 EVI2AP22794 236 aa9.18□□□□□ -0.94
SENP3-209ENST00000610454 TAGLN2P37802 199 aaKnown RBP9.18□□□□□ -0.94
SENP3-209ENST00000610454 FAM74A4Q5TZK3 123 aa9.18□□□□□ -0.94
SENP3-209ENST00000610454 KRTAP1-5Q9BYS1 174 aa9.18□□□□□ -0.94
SENP3-209ENST00000610454 BCL2P10415 239 aa9.17□□□□□ -0.94
SENP3-209ENST00000610454 GNG4P50150 75 aa9.17□□□□□ -0.94
SENP3-209ENST00000610454 TNP2Q05952 138 aa9.17□□□□□ -0.94
SENP3-209ENST00000610454 CENPWQ5EE01 88 aa9.17□□□□□ -0.94
SENP3-209ENST00000610454 DMRTA1Q5VZB9 504 aa9.17□□□□□ -0.94
SENP3-209ENST00000610454 DAZAP1Q96EP5 407 aaKnown RBP9.17□□□□□ -0.94
SENP3-209ENST00000610454 DERL1Q9BUN8 251 aa9.17□□□□□ -0.94
SENP3-209ENST00000610454 MLST8Q9BVC4 326 aa9.17□□□□□ -0.94
SENP3-209ENST00000610454 VAX2Q9UIW0 290 aa9.17□□□□□ -0.94
SENP3-209ENST00000610454 BOLA1Q9Y3E2 137 aa9.17□□□□□ -0.94
SENP3-209ENST00000610454 TRAV8-6A0A0B4J262 113 aa9.16□□□□□ -0.94
SENP3-209ENST00000610454 K7EP13 123 aa9.16□□□□□ -0.94
SENP3-209ENST00000610454 CXCL1P09341 107 aa9.16□□□□□ -0.94
SENP3-209ENST00000610454 MED14OSP0DP75 135 aa9.16□□□□□ -0.94
SENP3-209ENST00000610454 LINC00315P59091 139 aa9.16□□□□□ -0.94
SENP3-209ENST00000610454 OR10J3Q5JRS4 329 aa9.16□□□□□ -0.94
SENP3-209ENST00000610454 ALKAL2Q6UX46 152 aa9.16□□□□□ -0.94
SENP3-209ENST00000610454 WFDC10BQ8IUB3 73 aa9.16□□□□□ -0.94
SENP3-209ENST00000610454 JPT2Q9H910 190 aa9.16□□□□□ -0.94
SENP3-209ENST00000610454 MED9Q9NWA0 146 aa9.16□□□□□ -0.94
SENP3-209ENST00000610454 DNAH2Q9P225 4427 aa9.16□□□□□ -0.94
SENP3-209ENST00000610454 TIRAPP58753 221 aa9.15□□□□□ -0.94
SENP3-209ENST00000610454 BLOC1S1P78537 153 aa9.15□□□□□ -0.94
SENP3-209ENST00000610454 RPL19P84098 196 aaKnown RBP9.15□□□□□ -0.94
SENP3-209ENST00000610454 ATP6V0E2Q8NHE4 81 aa9.15□□□□□ -0.94
SENP3-209ENST00000610454 SMIM12Q96EX1 92 aa9.15□□□□□ -0.94
SENP3-209ENST00000610454 SCRT2Q9NQ03 307 aa9.15□□□□□ -0.94
SENP3-209ENST00000610454 BIN3Q9NQY0 253 aa9.15□□□□□ -0.94
SENP3-209ENST00000610454 A0A087WWL8 130 aa9.14□□□□□ -0.95
SENP3-209ENST00000610454 GAGE12JA6NER3 117 aa9.14□□□□□ -0.95
SENP3-209ENST00000610454 GAGE1Q13065 139 aa9.14□□□□□ -0.95
SENP3-209ENST00000610454 GAGE4Q13068 117 aa9.14□□□□□ -0.95
SENP3-209ENST00000610454 GAGE5Q13069 117 aa9.14□□□□□ -0.95
SENP3-209ENST00000610454 GAGE13Q4V321 117 aa9.14□□□□□ -0.95
SENP3-209ENST00000610454 SPANXN1Q5VSR9 72 aa9.14□□□□□ -0.95
SENP3-209ENST00000610454 NFE4Q86UQ8 179 aa9.14□□□□□ -0.95
SENP3-209ENST00000610454 C10orf126Q8N4M7 172 aa9.14□□□□□ -0.95
SENP3-209ENST00000610454 SFRP2Q96HF1 295 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms