RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 UPK3BQ9BT76 320 aa11.34□□□□□ -0.59
SHKBP1-215ENST00000597649 SMDT1Q9H4I9 107 aa11.34□□□□□ -0.59
SHKBP1-215ENST00000597649 NAGKQ9UJ70 344 aa11.34□□□□□ -0.59
SHKBP1-215ENST00000597649 SRP19P09132 144 aaKnown RBP11.33□□□□□ -0.6
SHKBP1-215ENST00000597649 XGP55808 180 aa11.33□□□□□ -0.6
SHKBP1-215ENST00000597649 CENPWQ5EE01 88 aa11.33□□□□□ -0.6
SHKBP1-215ENST00000597649 FAM159AQ6UWV7 190 aa11.33□□□□□ -0.6
SHKBP1-215ENST00000597649 LINC00612Q8N6U2 182 aa11.33□□□□□ -0.6
SHKBP1-215ENST00000597649 NHLRC2Q8NBF2 726 aa11.33□□□□□ -0.6
SHKBP1-215ENST00000597649 IGHV1OR15-1A0A075B7D0 117 aa11.32□□□□□ -0.6
SHKBP1-215ENST00000597649 A0A1W2PPQ1 181 aa11.32□□□□□ -0.6
SHKBP1-215ENST00000597649 FABP5P3A8MUU1 101 aa11.32□□□□□ -0.6
SHKBP1-215ENST00000597649 PFN1P07737 140 aaKnown RBP11.32□□□□□ -0.6
SHKBP1-215ENST00000597649 MGST1P10620 155 aaKnown RBP11.32□□□□□ -0.6
SHKBP1-215ENST00000597649 ZNF80P51504 273 aaPredicted RBP11.32□□□□□ -0.6
SHKBP1-215ENST00000597649 MUC21Q5SSG8 566 aa11.32□□□□□ -0.6
SHKBP1-215ENST00000597649 Q6ZRN7 208 aaPredicted RBP11.32□□□□□ -0.6
SHKBP1-215ENST00000597649 EIF4E3Q8N5X7 224 aaKnown RBP11.32□□□□□ -0.6
SHKBP1-215ENST00000597649 ZC2HC1AQ96GY0 325 aa11.32□□□□□ -0.6
SHKBP1-215ENST00000597649 PARLQ9H300 379 aa11.32□□□□□ -0.6
SHKBP1-215ENST00000597649 SRSF3P84103 164 aaKnown RBP11.31□□□□□ -0.6
SHKBP1-215ENST00000597649 FAM162BQ5T6X4 162 aa11.31□□□□□ -0.6
SHKBP1-215ENST00000597649 Q6ZQT7 251 aa11.31□□□□□ -0.6
SHKBP1-215ENST00000597649 ZNF493Q6ZR52 646 aa11.31□□□□□ -0.6
SHKBP1-215ENST00000597649 MRPS16Q9Y3D3 137 aaKnown RBP11.31□□□□□ -0.6
SHKBP1-215ENST00000597649 ZNF727A8MUV8 499 aa11.3□□□□□ -0.6
SHKBP1-215ENST00000597649 LINC00315P59091 139 aa11.3□□□□□ -0.6
SHKBP1-215ENST00000597649 PRR27Q6MZM9 219 aa11.3□□□□□ -0.6
SHKBP1-215ENST00000597649 COX8CQ7Z4L0 72 aa11.3□□□□□ -0.6
SHKBP1-215ENST00000597649 TMEM263Q8WUH6 116 aaKnown RBP11.3□□□□□ -0.6
SHKBP1-215ENST00000597649 SMIM12Q96EX1 92 aa11.3□□□□□ -0.6
SHKBP1-215ENST00000597649 KCNS1Q96KK3 526 aa11.3□□□□□ -0.6
SHKBP1-215ENST00000597649 SMIM7Q9BQ49 75 aa11.3□□□□□ -0.6
SHKBP1-215ENST00000597649 LINC00467Q9BRT7 94 aa11.3□□□□□ -0.6
SHKBP1-215ENST00000597649 BIN3Q9NQY0 253 aa11.3□□□□□ -0.6
SHKBP1-215ENST00000597649 DNAH8Q96JB1 4490 aa11.3□□□□□ -0.6
SHKBP1-215ENST00000597649 GAGE12BA1L429 117 aa11.29□□□□□ -0.6
SHKBP1-215ENST00000597649 SH2D1AO60880 128 aa11.29□□□□□ -0.6
SHKBP1-215ENST00000597649 GAGE7O76087 117 aa11.29□□□□□ -0.6
SHKBP1-215ENST00000597649 ORM1P02763 201 aa11.29□□□□□ -0.6
SHKBP1-215ENST00000597649 GAGE12FP0CL80 117 aa11.29□□□□□ -0.6
SHKBP1-215ENST00000597649 GAGE12GP0CL81 117 aa11.29□□□□□ -0.6
SHKBP1-215ENST00000597649 GAGE12IP0CL82 117 aa11.29□□□□□ -0.6
SHKBP1-215ENST00000597649 DAZAP1Q96EP5 407 aaKnown RBP11.29□□□□□ -0.6
SHKBP1-215ENST00000597649 MLST8Q9BVC4 326 aa11.29□□□□□ -0.6
SHKBP1-215ENST00000597649 SDF2L1Q9HCN8 221 aa11.29□□□□□ -0.6
SHKBP1-215ENST00000597649 TRGV11A0A075B6L2 103 aa11.28□□□□□ -0.6
SHKBP1-215ENST00000597649 C9JCJ5 164 aa11.28□□□□□ -0.6
SHKBP1-215ENST00000597649 C9JQL5 133 aa11.28□□□□□ -0.6
SHKBP1-215ENST00000597649 ANXA2RQ3ZCQ2 193 aa11.28□□□□□ -0.6
SHKBP1-215ENST00000597649 FAM74A3Q4VXF1 159 aa11.28□□□□□ -0.6
SHKBP1-215ENST00000597649 PGPEP1Q9NXJ5 209 aa11.28□□□□□ -0.6
SHKBP1-215ENST00000597649 TRBV20OR9-2A0A075B6H5 130 aa11.27□□□□□ -0.61
SHKBP1-215ENST00000597649 PGPEP1LA6NFU8 196 aa11.27□□□□□ -0.61
SHKBP1-215ENST00000597649 SNURFLB1AK76 121 aa11.27□□□□□ -0.61
SHKBP1-215ENST00000597649 CRIP1P50238 77 aa11.27□□□□□ -0.61
SHKBP1-215ENST00000597649 COMMD7Q86VX2 200 aa11.27□□□□□ -0.61
SHKBP1-215ENST00000597649 TNFRSF18Q9Y5U5 241 aa11.27□□□□□ -0.61
SHKBP1-215ENST00000597649 H3BNG1 76 aa11.26□□□□□ -0.61
SHKBP1-215ENST00000597649 M0R036 132 aa11.26□□□□□ -0.61
SHKBP1-215ENST00000597649 IGLV2-8P01709 118 aa11.26□□□□□ -0.61
SHKBP1-215ENST00000597649 ZNF415Q09FC8 603 aa11.26□□□□□ -0.61
SHKBP1-215ENST00000597649 TDRG1Q3Y452 100 aa11.26□□□□□ -0.61
SHKBP1-215ENST00000597649 Q5VSD8 79 aa11.26□□□□□ -0.61
SHKBP1-215ENST00000597649 OCC1Q8TAD7 63 aa11.26□□□□□ -0.61
SHKBP1-215ENST00000597649 VSIG2Q96IQ7 327 aa11.26□□□□□ -0.61
SHKBP1-215ENST00000597649 TP53TG3Q9ULZ0 132 aa11.26□□□□□ -0.61
SHKBP1-215ENST00000597649 A0A096LPF7 62 aa11.25□□□□□ -0.61
SHKBP1-215ENST00000597649 B4DEV8 164 aa11.25□□□□□ -0.61
SHKBP1-215ENST00000597649 GNRH2O43555 120 aa11.25□□□□□ -0.61
SHKBP1-215ENST00000597649 KRTAP10-1P60331 282 aa11.25□□□□□ -0.61
SHKBP1-215ENST00000597649 TMEM241Q24JQ0 296 aa11.25□□□□□ -0.61
SHKBP1-215ENST00000597649 UQCC3Q6UW78 93 aa11.25□□□□□ -0.61
SHKBP1-215ENST00000597649 GSN-AS1Q9NRJ2 163 aa11.25□□□□□ -0.61
SHKBP1-215ENST00000597649 C11orf21Q9P2W6 132 aa11.25□□□□□ -0.61
SHKBP1-215ENST00000597649 LY96Q9Y6Y9 160 aa11.25□□□□□ -0.61
SHKBP1-215ENST00000597649 LINC00862A6NCI5 91 aa11.24□□□□□ -0.61
SHKBP1-215ENST00000597649 TYMSP04818 313 aa11.24□□□□□ -0.61
SHKBP1-215ENST00000597649 SFTA3P0C7M3 94 aa11.24□□□□□ -0.61
SHKBP1-215ENST00000597649 S100A4P26447 101 aaKnown RBP11.24□□□□□ -0.61
SHKBP1-215ENST00000597649 IBA57Q5T440 356 aaKnown RBP11.24□□□□□ -0.61
SHKBP1-215ENST00000597649 Q6ZTI0 123 aa11.24□□□□□ -0.61
SHKBP1-215ENST00000597649 TMSB15BA0A087X1C1 80 aa11.23□□□□□ -0.61
SHKBP1-215ENST00000597649 IGKV3D-20A0A0C4DH25 116 aa11.23□□□□□ -0.61
SHKBP1-215ENST00000597649 ASIPP42127 132 aa11.23□□□□□ -0.61
SHKBP1-215ENST00000597649 LINC01559Q495D7 138 aa11.23□□□□□ -0.61
SHKBP1-215ENST00000597649 NAT8Q9UHE5 227 aa11.23□□□□□ -0.61
SHKBP1-215ENST00000597649 IGHV3-16A0A0C4DH30 117 aa11.22□□□□□ -0.61
SHKBP1-215ENST00000597649 KRBOX1C9JBD0 128 aa11.22□□□□□ -0.61
SHKBP1-215ENST00000597649 P01737 135 aa11.22□□□□□ -0.61
SHKBP1-215ENST00000597649 TCL1AP56279 114 aa11.22□□□□□ -0.61
SHKBP1-215ENST00000597649 C11orf72Q8NBR9 251 aa11.22□□□□□ -0.61
SHKBP1-215ENST00000597649 MDFICQ9P1T7 246 aa11.22□□□□□ -0.61
SHKBP1-215ENST00000597649 GRIFINA4D1Z8 144 aa11.21□□□□□ -0.61
SHKBP1-215ENST00000597649 K7EN84 100 aa11.21□□□□□ -0.61
SHKBP1-215ENST00000597649 SIVA1O15304 175 aa11.21□□□□□ -0.61
SHKBP1-215ENST00000597649 SMR3BP02814 79 aaPredicted RBP11.21□□□□□ -0.61
SHKBP1-215ENST00000597649 DAZ2Q13117 558 aaKnown RBP11.21□□□□□ -0.61
SHKBP1-215ENST00000597649 LINC01551Q86U37 167 aa11.21□□□□□ -0.61
SHKBP1-215ENST00000597649 OR2D3Q8NGH3 330 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms