RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 NHP2Q9NX24 153 aaKnown RBP10.74□□□□□ -0.69
CDK5RAP3-237ENST00000585163 ABCA2Q9BZC7 2435 aa10.73□□□□□ -0.69
CDK5RAP3-237ENST00000585163 H3BUA1 57 aa10.73□□□□□ -0.69
CDK5RAP3-237ENST00000585163 C19orf84I3L1E1 186 aa10.73□□□□□ -0.69
CDK5RAP3-237ENST00000585163 SCGB3A1Q96QR1 104 aa10.73□□□□□ -0.69
CDK5RAP3-237ENST00000585163 CELSR1Q9NYQ6 3014 aa10.73□□□□□ -0.69
CDK5RAP3-237ENST00000585163 NEXN-AS1Q8NBZ9 246 aa10.73□□□□□ -0.69
CDK5RAP3-237ENST00000585163 RPL39LQ96EH5 51 aaKnown RBP10.73□□□□□ -0.69
CDK5RAP3-237ENST00000585163 RNF223E7ERA6 249 aa10.72□□□□□ -0.69
CDK5RAP3-237ENST00000585163 IGHG2P01859 326 aa10.72□□□□□ -0.69
CDK5RAP3-237ENST00000585163 LY6DQ14210 128 aa10.72□□□□□ -0.69
CDK5RAP3-237ENST00000585163 KLK15Q9H2R5 256 aa10.72□□□□□ -0.69
CDK5RAP3-237ENST00000585163 TRBV7-9A0A0J9YWB2 115 aa10.72□□□□□ -0.69
CDK5RAP3-237ENST00000585163 RNASE4P34096 147 aaKnown RBP10.72□□□□□ -0.69
CDK5RAP3-237ENST00000585163 RPL11P62913 178 aaKnown RBP10.72□□□□□ -0.69
CDK5RAP3-237ENST00000585163 F6UB75 175 aa10.71□□□□□ -0.69
CDK5RAP3-237ENST00000585163 IGHV3-11P01762 117 aa10.71□□□□□ -0.69
CDK5RAP3-237ENST00000585163 RNASE3P12724 160 aaKnown RBP10.71□□□□□ -0.69
CDK5RAP3-237ENST00000585163 CKS1BP61024 79 aa10.71□□□□□ -0.69
CDK5RAP3-237ENST00000585163 VPS13CQ709C8 3753 aa10.71□□□□□ -0.7
CDK5RAP3-237ENST00000585163 IGHV4-61A0A0C4DH41 118 aa10.7□□□□□ -0.7
CDK5RAP3-237ENST00000585163 E9PLD3 99 aa10.7□□□□□ -0.7
CDK5RAP3-237ENST00000585163 GNRH2O43555 120 aa10.7□□□□□ -0.7
CDK5RAP3-237ENST00000585163 LY6EQ16553 131 aa10.7□□□□□ -0.7
CDK5RAP3-237ENST00000585163 C2orf66Q6UXQ4 117 aa10.7□□□□□ -0.7
CDK5RAP3-237ENST00000585163 OR11H12B2RN74 326 aa10.69□□□□□ -0.7
CDK5RAP3-237ENST00000585163 PPP1R17O96001 155 aa10.69□□□□□ -0.7
CDK5RAP3-237ENST00000585163 MGPP08493 103 aa10.69□□□□□ -0.7
CDK5RAP3-237ENST00000585163 IGHV4-38-2P0DP08 117 aa10.69□□□□□ -0.7
CDK5RAP3-237ENST00000585163 OR11H1Q8NG94 326 aa10.69□□□□□ -0.7
CDK5RAP3-237ENST00000585163 OR11H2Q8NH07 326 aa10.69□□□□□ -0.7
CDK5RAP3-237ENST00000585163 RHPN1-AS1Q9BWJ2 59 aa10.69□□□□□ -0.7
CDK5RAP3-237ENST00000585163 IGLL5B9A064 214 aa10.69□□□□□ -0.7
CDK5RAP3-237ENST00000585163 LINC01619G3V211 115 aa10.69□□□□□ -0.7
CDK5RAP3-237ENST00000585163 POM121L12Q8N7R1 296 aa10.69□□□□□ -0.7
CDK5RAP3-237ENST00000585163 BAALCQ8WXS3 180 aa10.69□□□□□ -0.7
CDK5RAP3-237ENST00000585163 HIST1H4GQ99525 98 aa10.69□□□□□ -0.7
CDK5RAP3-237ENST00000585163 AGRNO00468 2067 aa10.69□□□□□ -0.7
CDK5RAP3-237ENST00000585163 TRBV7-3A0A075B6L6 115 aa10.68□□□□□ -0.7
CDK5RAP3-237ENST00000585163 MYMXA0A1B0GTQ4 84 aa10.68□□□□□ -0.7
CDK5RAP3-237ENST00000585163 A6NDX4 124 aa10.68□□□□□ -0.7
CDK5RAP3-237ENST00000585163 H3BUX3 64 aa10.68□□□□□ -0.7
CDK5RAP3-237ENST00000585163 NXPH4O95158 308 aa10.68□□□□□ -0.7
CDK5RAP3-237ENST00000585163 C12orf74Q32Q52 190 aa10.68□□□□□ -0.7
CDK5RAP3-237ENST00000585163 IGKV3-7A0A075B6H7 116 aa10.68□□□□□ -0.7
CDK5RAP3-237ENST00000585163 TSPAN13O95857 204 aa10.68□□□□□ -0.7
CDK5RAP3-237ENST00000585163 PIMREGQ9BSJ6 248 aa10.68□□□□□ -0.7
CDK5RAP3-237ENST00000585163 DAZ1Q9NQZ3 744 aaKnown RBP10.68□□□□□ -0.7
CDK5RAP3-237ENST00000585163 IGLV1-40P01703 118 aa10.67□□□□□ -0.7
CDK5RAP3-237ENST00000585163 BLCAPP62952 87 aa10.67□□□□□ -0.7
CDK5RAP3-237ENST00000585163 FOXI2Q6ZQN5 318 aa10.67□□□□□ -0.7
CDK5RAP3-237ENST00000585163 CITED2Q99967 270 aaPredicted RBP10.67□□□□□ -0.7
CDK5RAP3-237ENST00000585163 KIF25-AS1Q9Y6Z4 181 aa10.67□□□□□ -0.7
CDK5RAP3-237ENST00000585163 PRSS29PA6NIE9 313 aa10.66□□□□□ -0.7
CDK5RAP3-237ENST00000585163 KLLNB2CW77 178 aa10.66□□□□□ -0.7
CDK5RAP3-237ENST00000585163 LINC00315P59091 139 aa10.66□□□□□ -0.7
CDK5RAP3-237ENST00000585163 Q6ZS46 218 aa10.66□□□□□ -0.7
CDK5RAP3-237ENST00000585163 LCNL1Q6ZST4 164 aa10.66□□□□□ -0.7
CDK5RAP3-237ENST00000585163 MTURNQ8N3F0 131 aa10.66□□□□□ -0.7
CDK5RAP3-237ENST00000585163 SPTAN1Q13813 2472 aaKnown RBP10.66□□□□□ -0.7
CDK5RAP3-237ENST00000585163 IGHV4OR15-8A0A075B7B6 117 aa10.66□□□□□ -0.7
CDK5RAP3-237ENST00000585163 A0A087WW49 117 aa10.66□□□□□ -0.7
CDK5RAP3-237ENST00000585163 C10orf105Q8TEF2 133 aa10.66□□□□□ -0.7
CDK5RAP3-237ENST00000585163 MUC4Q99102 2169 aa10.66□□□□□ -0.7
CDK5RAP3-237ENST00000585163 A0A1B0GWB2 263 aa10.65□□□□□ -0.7
CDK5RAP3-237ENST00000585163 AZU1P20160 251 aa10.65□□□□□ -0.7
CDK5RAP3-237ENST00000585163 TCTEX1D4Q5JR98 221 aa10.65□□□□□ -0.7
CDK5RAP3-237ENST00000585163 GNLYP22749 145 aa10.65□□□□□ -0.7
CDK5RAP3-237ENST00000585163 RPL32P62910 135 aaKnown RBP10.65□□□□□ -0.7
CDK5RAP3-237ENST00000585163 LGALS1P09382 135 aaKnown RBP10.64□□□□□ -0.71
CDK5RAP3-237ENST00000585163 ID1P41134 155 aa10.64□□□□□ -0.71
CDK5RAP3-237ENST00000585163 PRADC1Q9BSG0 188 aa10.64□□□□□ -0.71
CDK5RAP3-237ENST00000585163 SRD5A1P18405 259 aa10.64□□□□□ -0.71
CDK5RAP3-237ENST00000585163 CFHR3Q02985 330 aa10.64□□□□□ -0.71
CDK5RAP3-237ENST00000585163 FAM159AQ6UWV7 190 aa10.64□□□□□ -0.71
CDK5RAP3-237ENST00000585163 YAE1D1Q9NRH1 226 aa10.64□□□□□ -0.71
CDK5RAP3-237ENST00000585163 TEX48A0A1B0GUV7 120 aa10.63□□□□□ -0.71
CDK5RAP3-237ENST00000585163 F8W1H4 67 aa10.63□□□□□ -0.71
CDK5RAP3-237ENST00000585163 K7EMT4 169 aa10.63□□□□□ -0.71
CDK5RAP3-237ENST00000585163 DUSP14O95147 198 aaKnown RBP10.63□□□□□ -0.71
CDK5RAP3-237ENST00000585163 RPL24P83731 157 aaKnown RBP10.63□□□□□ -0.71
CDK5RAP3-237ENST00000585163 DCANP1Q8TF63 244 aa10.63□□□□□ -0.71
CDK5RAP3-237ENST00000585163 CYSLTR1Q9Y271 337 aa10.63□□□□□ -0.71
CDK5RAP3-237ENST00000585163 CRYGDP07320 174 aa10.63□□□□□ -0.71
CDK5RAP3-237ENST00000585163 RRN3P1Q2M238 152 aa10.63□□□□□ -0.71
CDK5RAP3-237ENST00000585163 SPTBN4Q9H254 2564 aa10.63□□□□□ -0.71
CDK5RAP3-237ENST00000585163 ITPR1Q14643 2758 aa10.63□□□□□ -0.71
CDK5RAP3-237ENST00000585163 EDN2P20800 178 aa10.62□□□□□ -0.71
CDK5RAP3-237ENST00000585163 POLR2KP53803 58 aaKnown RBP10.62□□□□□ -0.71
CDK5RAP3-237ENST00000585163 SIGMAR1Q99720 223 aa10.62□□□□□ -0.71
CDK5RAP3-237ENST00000585163 CCL19Q99731 98 aa10.62□□□□□ -0.71
CDK5RAP3-237ENST00000585163 NCOR2Q9Y618 2525 aa10.62□□□□□ -0.71
CDK5RAP3-237ENST00000585163 LINC01549A6NIU2 74 aa10.62□□□□□ -0.71
CDK5RAP3-237ENST00000585163 TSHBP01222 138 aa10.62□□□□□ -0.71
CDK5RAP3-237ENST00000585163 COX6B1P14854 86 aa10.62□□□□□ -0.71
CDK5RAP3-237ENST00000585163 IGIPA6NJ69 53 aa10.61□□□□□ -0.71
CDK5RAP3-237ENST00000585163 SUMO4Q6EEV6 95 aa10.61□□□□□ -0.71
CDK5RAP3-237ENST00000585163 ZFP2Q6ZN57 461 aa10.61□□□□□ -0.71
CDK5RAP3-237ENST00000585163 PRORYQ9H606 182 aa10.61□□□□□ -0.71
CDK5RAP3-237ENST00000585163 JPT2Q9H910 190 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms