RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 ORM1P02763 201 aa7.97□□□□□ -1.13
TOP3A-216ENST00000583804 PRM2P04554 102 aa7.97□□□□□ -1.13
TOP3A-216ENST00000583804 SSTP61278 116 aa7.97□□□□□ -1.13
TOP3A-216ENST00000583804 Q0VG73 95 aa7.97□□□□□ -1.13
TOP3A-216ENST00000583804 CDPF1Q6NVV7 123 aa7.97□□□□□ -1.13
TOP3A-216ENST00000583804 CSNK1G2-AS1Q8NCQ2 148 aa7.97□□□□□ -1.13
TOP3A-216ENST00000583804 OR2D3Q8NGH3 330 aa7.97□□□□□ -1.13
TOP3A-216ENST00000583804 RNF183Q96D59 192 aa7.97□□□□□ -1.13
TOP3A-216ENST00000583804 SPATA25Q9BR10 227 aa7.97□□□□□ -1.13
TOP3A-216ENST00000583804 TPPP3Q9BW30 176 aa7.97□□□□□ -1.13
TOP3A-216ENST00000583804 MRPL18Q9H0U6 180 aaKnown RBP7.97□□□□□ -1.13
TOP3A-216ENST00000583804 ZMAT4Q9H898 229 aa7.97□□□□□ -1.13
TOP3A-216ENST00000583804 C11orf21Q9P2W6 132 aa7.97□□□□□ -1.13
TOP3A-216ENST00000583804 MUC21A0A0G2JKD1 596 aa7.96□□□□□ -1.13
TOP3A-216ENST00000583804 MUC21A0A140T8X8 626 aa7.96□□□□□ -1.13
TOP3A-216ENST00000583804 C19orf71A6NCJ1 209 aa7.96□□□□□ -1.13
TOP3A-216ENST00000583804 KLLNB2CW77 178 aa7.96□□□□□ -1.13
TOP3A-216ENST00000583804 C1orf158Q8N1D5 194 aa7.96□□□□□ -1.13
TOP3A-216ENST00000583804 LINC01587Q99440 93 aa7.96□□□□□ -1.13
TOP3A-216ENST00000583804 TM2D3Q9BRN9 247 aa7.96□□□□□ -1.13
TOP3A-216ENST00000583804 OVOL2Q9BRP0 275 aa7.96□□□□□ -1.13
TOP3A-216ENST00000583804 RPP21Q9H633 154 aaKnown RBP7.96□□□□□ -1.13
TOP3A-216ENST00000583804 TMEM189A5PLL7 270 aa7.95□□□□□ -1.14
TOP3A-216ENST00000583804 FABP5P3A8MUU1 101 aa7.95□□□□□ -1.14
TOP3A-216ENST00000583804 SNURFLB1AK76 121 aa7.95□□□□□ -1.14
TOP3A-216ENST00000583804 TSTD3H0UI37 97 aa7.95□□□□□ -1.14
TOP3A-216ENST00000583804 SPINK4O60575 86 aa7.95□□□□□ -1.14
TOP3A-216ENST00000583804 HLA-DQA1P01909 254 aa7.95□□□□□ -1.14
TOP3A-216ENST00000583804 ANXA2RQ3ZCQ2 193 aa7.95□□□□□ -1.14
TOP3A-216ENST00000583804 OR11H2Q8NH07 326 aa7.95□□□□□ -1.14
TOP3A-216ENST00000583804 TP53TG1Q9Y2A0 90 aa7.95□□□□□ -1.14
TOP3A-216ENST00000583804 TRAV21A0A0B4J279 112 aa7.94□□□□□ -1.14
TOP3A-216ENST00000583804 NHLRC4P0CG21 123 aaPredicted RBP7.94□□□□□ -1.14
TOP3A-216ENST00000583804 IQCJQ1A5X6 159 aa7.94□□□□□ -1.14
TOP3A-216ENST00000583804 OR10J3Q5JRS4 329 aa7.94□□□□□ -1.14
TOP3A-216ENST00000583804 TMEM136Q6ZRR5 245 aa7.94□□□□□ -1.14
TOP3A-216ENST00000583804 TP53TG3Q9ULZ0 132 aa7.94□□□□□ -1.14
TOP3A-216ENST00000583804 IGKV3D-20A0A0C4DH25 116 aa7.94□□□□□ -1.14
TOP3A-216ENST00000583804 GNRH2O43555 120 aa7.94□□□□□ -1.14
TOP3A-216ENST00000583804 RAB4BP61018 213 aa7.94□□□□□ -1.14
TOP3A-216ENST00000583804 CT83Q5H943 113 aa7.94□□□□□ -1.14
TOP3A-216ENST00000583804 ZNF705AQ6ZN79 300 aaPredicted RBP7.94□□□□□ -1.14
TOP3A-216ENST00000583804 TMEM256Q8N2U0 113 aa7.94□□□□□ -1.14
TOP3A-216ENST00000583804 C20orf144Q9BQM9 153 aa7.94□□□□□ -1.14
TOP3A-216ENST00000583804 NBEAL2Q6ZNJ1 2754 aa7.93□□□□□ -1.14
TOP3A-216ENST00000583804 ZNF324O75467 553 aaPredicted RBP7.93□□□□□ -1.14
TOP3A-216ENST00000583804 LINC00310P59036 64 aa7.93□□□□□ -1.14
TOP3A-216ENST00000583804 Q6AWC8 147 aa7.93□□□□□ -1.14
TOP3A-216ENST00000583804 COX8CQ7Z4L0 72 aa7.93□□□□□ -1.14
TOP3A-216ENST00000583804 PGLYRP4Q96LB8 373 aa7.93□□□□□ -1.14
TOP3A-216ENST00000583804 CBY3A6NI87 242 aa7.92□□□□□ -1.14
TOP3A-216ENST00000583804 H3BVH4 76 aa7.92□□□□□ -1.14
TOP3A-216ENST00000583804 DDTP30046 118 aa7.92□□□□□ -1.14
TOP3A-216ENST00000583804 RRN3P1Q2M238 152 aa7.92□□□□□ -1.14
TOP3A-216ENST00000583804 FAM159AQ6UWV7 190 aa7.92□□□□□ -1.14
TOP3A-216ENST00000583804 ATP5L2Q7Z4Y8 100 aa7.92□□□□□ -1.14
TOP3A-216ENST00000583804 TSKUQ8WUA8 353 aa7.92□□□□□ -1.14
TOP3A-216ENST00000583804 GTSF1Q8WW33 167 aa7.92□□□□□ -1.14
TOP3A-216ENST00000583804 NEU1Q99519 415 aa7.92□□□□□ -1.14
TOP3A-216ENST00000583804 NAT8BQ9UHF3 227 aa7.92□□□□□ -1.14
TOP3A-216ENST00000583804 IGHV1OR15-1A0A075B7D0 117 aa7.91□□□□□ -1.14
TOP3A-216ENST00000583804 SMIM9A6NGZ8 99 aa7.91□□□□□ -1.14
TOP3A-216ENST00000583804 NUPR1O60356 82 aa7.91□□□□□ -1.14
TOP3A-216ENST00000583804 SERF1AO75920 110 aa7.91□□□□□ -1.14
TOP3A-216ENST00000583804 LINC01559Q495D7 138 aa7.91□□□□□ -1.14
TOP3A-216ENST00000583804 X6R8D5 127 aa7.91□□□□□ -1.14
TOP3A-216ENST00000583804 FAM231BA6NCW3 169 aa7.9□□□□□ -1.14
TOP3A-216ENST00000583804 HIGD1CA8MV81 97 aa7.9□□□□□ -1.14
TOP3A-216ENST00000583804 DEFB4AO15263 64 aa7.9□□□□□ -1.14
TOP3A-216ENST00000583804 MIFP14174 115 aa7.9□□□□□ -1.14
TOP3A-216ENST00000583804 AZU1P20160 251 aa7.9□□□□□ -1.14
TOP3A-216ENST00000583804 S100A4P26447 101 aaKnown RBP7.9□□□□□ -1.14
TOP3A-216ENST00000583804 EMP1P54849 157 aa7.9□□□□□ -1.14
TOP3A-216ENST00000583804 MRPL54Q6P161 138 aaKnown RBP7.9□□□□□ -1.14
TOP3A-216ENST00000583804 ZNF664Q8N3J9 261 aa7.9□□□□□ -1.14
TOP3A-216ENST00000583804 GFRA4Q9GZZ7 299 aa7.9□□□□□ -1.14
TOP3A-216ENST00000583804 PRKDCP78527 4128 aaKnown RBP7.89□□□□□ -1.15
TOP3A-216ENST00000583804 IGHV4-28A0A0C4DH34 117 aa7.89□□□□□ -1.15
TOP3A-216ENST00000583804 A0A1B0GXF2 115 aa7.89□□□□□ -1.15
TOP3A-216ENST00000583804 A8MWL6 223 aa7.89□□□□□ -1.15
TOP3A-216ENST00000583804 ASIPP42127 132 aa7.89□□□□□ -1.15
TOP3A-216ENST00000583804 ZNF575Q86XF7 245 aa7.89□□□□□ -1.15
TOP3A-216ENST00000583804 BAGE3Q86Y29 109 aa7.89□□□□□ -1.15
TOP3A-216ENST00000583804 FER1L6-AS1Q8NA97 138 aa7.89□□□□□ -1.15
TOP3A-216ENST00000583804 NUP35Q8NFH5 326 aa7.89□□□□□ -1.15
TOP3A-216ENST00000583804 C14orf144Q96I85 54 aa7.89□□□□□ -1.15
TOP3A-216ENST00000583804 MDFICQ9P1T7 246 aa7.89□□□□□ -1.15
TOP3A-216ENST00000583804 U3KQK5 164 aa7.89□□□□□ -1.15
TOP3A-216ENST00000583804 APCSP02743 223 aa7.88□□□□□ -1.15
TOP3A-216ENST00000583804 RPS20P60866 119 aaKnown RBP7.88□□□□□ -1.15
TOP3A-216ENST00000583804 LBHQ53QV2 105 aaPredicted RBP7.88□□□□□ -1.15
TOP3A-216ENST00000583804 LYZL1Q6UWQ5 148 aa7.88□□□□□ -1.15
TOP3A-216ENST00000583804 Q8NAQ8 132 aa7.88□□□□□ -1.15
TOP3A-216ENST00000583804 KCNS1Q96KK3 526 aa7.88□□□□□ -1.15
TOP3A-216ENST00000583804 NDUFAF3Q9BU61 184 aa7.88□□□□□ -1.15
TOP3A-216ENST00000583804 DNAH9Q9NYC9 4486 aa7.88□□□□□ -1.15
TOP3A-216ENST00000583804 A0A0J9YWU9 116 aa7.87□□□□□ -1.15
TOP3A-216ENST00000583804 ARMS2P0C7Q2 107 aa7.87□□□□□ -1.15
TOP3A-216ENST00000583804 ZNF493Q6ZR52 646 aa7.87□□□□□ -1.15
TOP3A-216ENST00000583804 OR10AG1Q8NH19 301 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms