RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 OR9Q1Q8NGQ5 310 aa0.13□□□□□ -2.39
SMCHD1-207ENST00000581711 LINC00208Q96KT6 92 aa0.13□□□□□ -2.39
SMCHD1-207ENST00000581711 SMIM7Q9BQ49 75 aa0.13□□□□□ -2.39
SMCHD1-207ENST00000581711 CENPHQ9H3R5 247 aa0.13□□□□□ -2.39
SMCHD1-207ENST00000581711 CBLN4Q9NTU7 201 aa0.13□□□□□ -2.39
SMCHD1-207ENST00000581711 MRPL35Q9NZE8 188 aaKnown RBP0.13□□□□□ -2.39
SMCHD1-207ENST00000581711 MRPL36Q9P0J6 103 aaKnown RBP0.13□□□□□ -2.39
SMCHD1-207ENST00000581711 COMMD3Q9UBI1 195 aa0.13□□□□□ -2.39
SMCHD1-207ENST00000581711 TRAPPC2LQ9UL33 140 aa0.13□□□□□ -2.39
SMCHD1-207ENST00000581711 PBRM1Q86U86 1689 aa0.13□□□□□ -2.39
SMCHD1-207ENST00000581711 MTORP42345 2549 aa0.13□□□□□ -2.39
SMCHD1-207ENST00000581711 HELZP42694 1942 aaKnown RBP0.13□□□□□ -2.39
SMCHD1-207ENST00000581711 XIRP1Q702N8 1843 aaKnown RBP0.13□□□□□ -2.39
SMCHD1-207ENST00000581711 FAM135BQ49AJ0 1406 aa0.13□□□□□ -2.39
SMCHD1-207ENST00000581711 MKI67P46013 3256 aaKnown RBP0.12□□□□□ -2.39
SMCHD1-207ENST00000581711 C5orf42Q9H799 3197 aa0.12□□□□□ -2.39
SMCHD1-207ENST00000581711 RBBP6Q7Z6E9 1792 aaKnown RBP0.12□□□□□ -2.39
SMCHD1-207ENST00000581711 A2MP01023 1474 aa0.12□□□□□ -2.39
SMCHD1-207ENST00000581711 SPAG17Q6Q759 2223 aa0.12□□□□□ -2.39
SMCHD1-207ENST00000581711 LOC107984640A0A0U1RRK4 108 aa0.12□□□□□ -2.39
SMCHD1-207ENST00000581711 LOC101927531A0A1B0GV80 90 aa0.12□□□□□ -2.39
SMCHD1-207ENST00000581711 HIGD1CA8MV81 97 aa0.12□□□□□ -2.39
SMCHD1-207ENST00000581711 M0QZK8 103 aa0.12□□□□□ -2.39
SMCHD1-207ENST00000581711 CDC42EP2O14613 210 aa0.12□□□□□ -2.39
SMCHD1-207ENST00000581711 TPST1O60507 370 aa0.12□□□□□ -2.39
SMCHD1-207ENST00000581711 IGF2P01344 180 aa0.12□□□□□ -2.39
SMCHD1-207ENST00000581711 HBDP02042 147 aa0.12□□□□□ -2.39
SMCHD1-207ENST00000581711 RPL7P18124 248 aaKnown RBP0.12□□□□□ -2.39
SMCHD1-207ENST00000581711 RPL22P35268 128 aaKnown RBP0.12□□□□□ -2.39
SMCHD1-207ENST00000581711 POLR2HP52434 150 aaKnown RBP0.12□□□□□ -2.39
SMCHD1-207ENST00000581711 TFAMQ00059 246 aaKnown RBP0.12□□□□□ -2.39
SMCHD1-207ENST00000581711 FXYD3Q14802 87 aa0.12□□□□□ -2.39
SMCHD1-207ENST00000581711 RHOHQ15669 191 aa0.12□□□□□ -2.39
SMCHD1-207ENST00000581711 ZNF56Q15929 161 aa0.12□□□□□ -2.39
SMCHD1-207ENST00000581711 TMEM128Q5BJH2 165 aa0.12□□□□□ -2.39
SMCHD1-207ENST00000581711 SAMD13Q5VXD3 122 aa0.12□□□□□ -2.39
SMCHD1-207ENST00000581711 LYPD5Q6UWN5 251 aa0.12□□□□□ -2.39
SMCHD1-207ENST00000581711 TOMM20LQ6UXN7 152 aa0.12□□□□□ -2.39
SMCHD1-207ENST00000581711 IDO2Q6ZQW0 420 aa0.12□□□□□ -2.39
SMCHD1-207ENST00000581711 BRK1Q8WUW1 75 aa0.12□□□□□ -2.39
SMCHD1-207ENST00000581711 NAT14Q8WUY8 206 aa0.12□□□□□ -2.39
SMCHD1-207ENST00000581711 SMPXQ9UHP9 88 aa0.12□□□□□ -2.39
SMCHD1-207ENST00000581711 ITPR2Q14571 2701 aa0.12□□□□□ -2.39
SMCHD1-207ENST00000581711 SYNE1Q8NF91 8797 aaKnown RBP0.12□□□□□ -2.39
SMCHD1-207ENST00000581711 DLEC1Q9Y238 1755 aa0.11□□□□□ -2.39
SMCHD1-207ENST00000581711 PIEZO2Q9H5I5 2752 aa0.11□□□□□ -2.39
SMCHD1-207ENST00000581711 SPTAN1Q13813 2472 aaKnown RBP0.11□□□□□ -2.39
SMCHD1-207ENST00000581711 CELSR2Q9HCU4 2923 aa0.11□□□□□ -2.39
SMCHD1-207ENST00000581711 EYSQ5T1H1 3165 aa0.11□□□□□ -2.39
SMCHD1-207ENST00000581711 IGHV1-24A0A0C4DH33 117 aa0.11□□□□□ -2.39
SMCHD1-207ENST00000581711 A0A0G2JMM0 328 aa0.11□□□□□ -2.39
SMCHD1-207ENST00000581711 NBDYA0A0U1RRE5 68 aa0.11□□□□□ -2.39
SMCHD1-207ENST00000581711 FXYD1O00168 92 aa0.11□□□□□ -2.39
SMCHD1-207ENST00000581711 PGRMC1O00264 195 aaKnown RBP0.11□□□□□ -2.39
SMCHD1-207ENST00000581711 IL7P13232 177 aa0.11□□□□□ -2.39
SMCHD1-207ENST00000581711 S100GP29377 79 aa0.11□□□□□ -2.39
SMCHD1-207ENST00000581711 CKS2P33552 79 aa0.11□□□□□ -2.39
SMCHD1-207ENST00000581711 RPL37P61927 97 aaKnown RBP0.11□□□□□ -2.39
SMCHD1-207ENST00000581711 IQCJQ1A5X6 159 aa0.11□□□□□ -2.39
SMCHD1-207ENST00000581711 ASB16-AS1Q495Z4 193 aa0.11□□□□□ -2.39
SMCHD1-207ENST00000581711 SPINK6Q6UWN8 80 aa0.11□□□□□ -2.39
SMCHD1-207ENST00000581711 DEFB132Q7Z7B7 95 aa0.11□□□□□ -2.39
SMCHD1-207ENST00000581711 C5orf56Q8N8D9 126 aa0.11□□□□□ -2.39
SMCHD1-207ENST00000581711 TMEM35BQ8NCS4 154 aa0.11□□□□□ -2.39
SMCHD1-207ENST00000581711 OR5A2Q8NGI9 324 aa0.11□□□□□ -2.39
SMCHD1-207ENST00000581711 DMAC1Q96GE9 116 aa0.11□□□□□ -2.39
SMCHD1-207ENST00000581711 CCDC115Q96NT0 180 aa0.11□□□□□ -2.39
SMCHD1-207ENST00000581711 RREB1Q92766 1687 aa0.11□□□□□ -2.39
SMCHD1-207ENST00000581711 ABCA1O95477 2261 aa0.11□□□□□ -2.39
SMCHD1-207ENST00000581711 MAP2P11137 1827 aaKnown RBP0.1□□□□□ -2.39
SMCHD1-207ENST00000581711 PTPRZ1P23471 2315 aaPredicted RBP0.1□□□□□ -2.39
SMCHD1-207ENST00000581711 TANC1Q9C0D5 1861 aa0.1□□□□□ -2.39
SMCHD1-207ENST00000581711 KIDINS220Q9ULH0 1771 aa0.1□□□□□ -2.39
SMCHD1-207ENST00000581711 PNMA8CA0A1B0GUJ8 204 aa0.1□□□□□ -2.39
SMCHD1-207ENST00000581711 UQCRQO14949 82 aa0.1□□□□□ -2.39
SMCHD1-207ENST00000581711 IGKCP01834 107 aa0.1□□□□□ -2.39
SMCHD1-207ENST00000581711 PCBD1P61457 104 aa0.1□□□□□ -2.39
SMCHD1-207ENST00000581711 PSPHP78330 225 aa0.1□□□□□ -2.39
SMCHD1-207ENST00000581711 UNQ5815/PRO19632Q6UWF5 114 aa0.1□□□□□ -2.39
SMCHD1-207ENST00000581711 SMIM15Q7Z3B0 74 aa0.1□□□□□ -2.39
SMCHD1-207ENST00000581711 OTOSQ8NHW6 89 aa0.1□□□□□ -2.39
SMCHD1-207ENST00000581711 SKA2Q8WVK7 121 aaPredicted RBP0.1□□□□□ -2.39
SMCHD1-207ENST00000581711 SELENOSQ9BQE4 189 aa0.1□□□□□ -2.39
SMCHD1-207ENST00000581711 DDA1Q9BW61 102 aa0.1□□□□□ -2.39
SMCHD1-207ENST00000581711 ATG5Q9H1Y0 275 aa0.1□□□□□ -2.39
SMCHD1-207ENST00000581711 PLXNA2O75051 1894 aa0.1□□□□□ -2.39
SMCHD1-207ENST00000581711 CDK12Q9NYV4 1490 aaPredicted RBP0.1□□□□□ -2.39
SMCHD1-207ENST00000581711 WDR97A6NE52 1622 aa0.09□□□□□ -2.39
SMCHD1-207ENST00000581711 MED23Q9ULK4 1368 aa0.09□□□□□ -2.39
SMCHD1-207ENST00000581711 MED13LQ71F56 2210 aa0.09□□□□□ -2.39
SMCHD1-207ENST00000581711 TPRP12270 2363 aaKnown RBP0.09□□□□□ -2.39
SMCHD1-207ENST00000581711 TSTD3H0UI37 97 aa0.09□□□□□ -2.4
SMCHD1-207ENST00000581711 DPM2O94777 84 aa0.09□□□□□ -2.4
SMCHD1-207ENST00000581711 APOC1P02654 83 aa0.09□□□□□ -2.4
SMCHD1-207ENST00000581711 CD3DP04234 171 aa0.09□□□□□ -2.4
SMCHD1-207ENST00000581711 TCRAP04437 139 aa0.09□□□□□ -2.4
SMCHD1-207ENST00000581711 SLC25A5P05141 298 aaKnown RBP0.09□□□□□ -2.4
SMCHD1-207ENST00000581711 CCKP06307 115 aa0.09□□□□□ -2.4
SMCHD1-207ENST00000581711 HIST1H1BP16401 226 aaKnown RBP0.09□□□□□ -2.4
SMCHD1-207ENST00000581711 ADCYAP1P18509 176 aa0.09□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms