RNA–Protein interactions for RNA: ENST00000577840.5

CUEDC1-207, Transcript of CUE domain containing 1, humanhuman

TSL 5 BASIC

Gene CUEDC1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-207ENST00000577840 MDFICQ9P1T7 246 aa11.17□□□□□ -0.62
CUEDC1-207ENST00000577840 A0A1B0GUT8 65 aa11.16□□□□□ -0.62
CUEDC1-207ENST00000577840 SNAI2O43623 268 aa11.16□□□□□ -0.62
CUEDC1-207ENST00000577840 RNASE3P12724 160 aaKnown RBP11.16□□□□□ -0.62
CUEDC1-207ENST00000577840 AZU1P20160 251 aa11.16□□□□□ -0.62
CUEDC1-207ENST00000577840 CTRLP40313 264 aa11.16□□□□□ -0.62
CUEDC1-207ENST00000577840 RIGQ13278 110 aa11.16□□□□□ -0.62
CUEDC1-207ENST00000577840 SYT8Q8NBV8 401 aa11.16□□□□□ -0.62
CUEDC1-207ENST00000577840 SPXQ9BT56 116 aa11.16□□□□□ -0.62
CUEDC1-207ENST00000577840 SSBP4Q9BWG4 385 aaPredicted RBP11.16□□□□□ -0.62
CUEDC1-207ENST00000577840 GSN-AS1Q9NRJ2 163 aa11.16□□□□□ -0.62
CUEDC1-207ENST00000577840 SPINK4O60575 86 aa11.15□□□□□ -0.62
CUEDC1-207ENST00000577840 PRM2P04554 102 aa11.15□□□□□ -0.62
CUEDC1-207ENST00000577840 MIFP14174 115 aa11.15□□□□□ -0.62
CUEDC1-207ENST00000577840 WDR73Q6P4I2 378 aa11.15□□□□□ -0.62
CUEDC1-207ENST00000577840 ZNF575Q86XF7 245 aa11.15□□□□□ -0.62
CUEDC1-207ENST00000577840 ZFP82Q8N141 532 aa11.15□□□□□ -0.62
CUEDC1-207ENST00000577840 RNASE8Q8TDE3 154 aaKnown RBP11.15□□□□□ -0.62
CUEDC1-207ENST00000577840 C9orf85Q96MD7 179 aa11.15□□□□□ -0.62
CUEDC1-207ENST00000577840 X6R8D5 127 aa11.15□□□□□ -0.62
CUEDC1-207ENST00000577840 A0A1B0GW15 77 aa11.14□□□□□ -0.63
CUEDC1-207ENST00000577840 S100A8P05109 93 aa11.14□□□□□ -0.63
CUEDC1-207ENST00000577840 SSTP61278 116 aa11.14□□□□□ -0.63
CUEDC1-207ENST00000577840 ELOBQ15370 118 aa11.14□□□□□ -0.63
CUEDC1-207ENST00000577840 MRPL54Q6P161 138 aaKnown RBP11.14□□□□□ -0.63
CUEDC1-207ENST00000577840 ATP5L2Q7Z4Y8 100 aa11.14□□□□□ -0.63
CUEDC1-207ENST00000577840 SPATA25Q9BR10 227 aa11.14□□□□□ -0.63
CUEDC1-207ENST00000577840 SCRT2Q9NQ03 307 aa11.14□□□□□ -0.63
CUEDC1-207ENST00000577840 MUC21A0A0G2JKD1 596 aa11.13□□□□□ -0.63
CUEDC1-207ENST00000577840 MUC21A0A140T8X8 626 aa11.13□□□□□ -0.63
CUEDC1-207ENST00000577840 M0R2P5 195 aa11.13□□□□□ -0.63
CUEDC1-207ENST00000577840 M0R381 172 aa11.13□□□□□ -0.63
CUEDC1-207ENST00000577840 TWIST1Q15672 202 aa11.13□□□□□ -0.63
CUEDC1-207ENST00000577840 SMIM15Q7Z3B0 74 aa11.13□□□□□ -0.63
CUEDC1-207ENST00000577840 SBSPONQ8IVN8 264 aa11.13□□□□□ -0.63
CUEDC1-207ENST00000577840 C11orf72Q8NBR9 251 aa11.13□□□□□ -0.63
CUEDC1-207ENST00000577840 OR10AG1Q8NH19 301 aa11.13□□□□□ -0.63
CUEDC1-207ENST00000577840 OVOL2Q9BRP0 275 aa11.13□□□□□ -0.63
CUEDC1-207ENST00000577840 ZMAT4Q9H898 229 aa11.13□□□□□ -0.63
CUEDC1-207ENST00000577840 TRBV24-1A0A075B6N3 115 aa11.12□□□□□ -0.63
CUEDC1-207ENST00000577840 TGIF2-C20orf24A0A0A6YYL0 155 aa11.12□□□□□ -0.63
CUEDC1-207ENST00000577840 NTF3P20783 257 aa11.12□□□□□ -0.63
CUEDC1-207ENST00000577840 HBBP68871 147 aa11.12□□□□□ -0.63
CUEDC1-207ENST00000577840 COX19Q49B96 90 aa11.12□□□□□ -0.63
CUEDC1-207ENST00000577840 CNFNQ9BYD5 112 aa11.12□□□□□ -0.63
CUEDC1-207ENST00000577840 IGHV4-4A0A075B6R2 117 aa11.11□□□□□ -0.63
CUEDC1-207ENST00000577840 TRGC1P0CF51 173 aa11.11□□□□□ -0.63
CUEDC1-207ENST00000577840 CAMPP49913 170 aa11.11□□□□□ -0.63
CUEDC1-207ENST00000577840 EMP1P54849 157 aa11.11□□□□□ -0.63
CUEDC1-207ENST00000577840 ZNF876PQ49A33 203 aa11.11□□□□□ -0.63
CUEDC1-207ENST00000577840 RASL11AQ6T310 242 aa11.11□□□□□ -0.63
CUEDC1-207ENST00000577840 FAM210BQ96KR6 192 aa11.11□□□□□ -0.63
CUEDC1-207ENST00000577840 RETNQ9HD89 108 aa11.11□□□□□ -0.63
CUEDC1-207ENST00000577840 RAB4BP61018 213 aa11.1□□□□□ -0.63
CUEDC1-207ENST00000577840 DAZ2Q13117 558 aaKnown RBP11.1□□□□□ -0.63
CUEDC1-207ENST00000577840 PTH2Q96A98 100 aa11.1□□□□□ -0.63
CUEDC1-207ENST00000577840 TM2D3Q9BRN9 247 aa11.1□□□□□ -0.63
CUEDC1-207ENST00000577840 NDUFAF3Q9BU61 184 aa11.1□□□□□ -0.63
CUEDC1-207ENST00000577840 NOP10Q9NPE3 64 aaKnown RBP11.1□□□□□ -0.63
CUEDC1-207ENST00000577840 TRGV1A0A0A0MS02 117 aa11.09□□□□□ -0.63
CUEDC1-207ENST00000577840 IGHV4-28A0A0C4DH34 117 aa11.09□□□□□ -0.63
CUEDC1-207ENST00000577840 SMIM17P0DL12 118 aa11.09□□□□□ -0.63
CUEDC1-207ENST00000577840 LGALS9BQ3B8N2 356 aa11.09□□□□□ -0.63
CUEDC1-207ENST00000577840 PIK3CD-AS1Q5SR53 167 aa11.09□□□□□ -0.63
CUEDC1-207ENST00000577840 DMRTA1Q5VZB9 504 aa11.09□□□□□ -0.63
CUEDC1-207ENST00000577840 IL17DQ8TAD2 202 aa11.09□□□□□ -0.63
CUEDC1-207ENST00000577840 YPEL4Q96NS1 127 aa11.09□□□□□ -0.63
CUEDC1-207ENST00000577840 AP1S3Q96PC3 154 aa11.09□□□□□ -0.63
CUEDC1-207ENST00000577840 B9D2Q9BPU9 175 aa11.09□□□□□ -0.63
CUEDC1-207ENST00000577840 A0A1B0GXF2 115 aa11.08□□□□□ -0.64
CUEDC1-207ENST00000577840 NXPH4O95158 308 aa11.08□□□□□ -0.64
CUEDC1-207ENST00000577840 Q8NAQ8 132 aa11.08□□□□□ -0.64
CUEDC1-207ENST00000577840 MRPL16Q9NX20 251 aaKnown RBP11.08□□□□□ -0.64
CUEDC1-207ENST00000577840 MUC4Q99102 2169 aa11.07□□□□□ -0.64
CUEDC1-207ENST00000577840 TEX48A0A1B0GUV7 120 aa11.07□□□□□ -0.64
CUEDC1-207ENST00000577840 PLAC8L1A1L4L8 177 aa11.07□□□□□ -0.64
CUEDC1-207ENST00000577840 COLCA2A8K830 154 aa11.07□□□□□ -0.64
CUEDC1-207ENST00000577840 LYRM9A8MSI8 78 aa11.07□□□□□ -0.64
CUEDC1-207ENST00000577840 A8MWV9 139 aa11.07□□□□□ -0.64
CUEDC1-207ENST00000577840 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.07□□□□□ -0.64
CUEDC1-207ENST00000577840 RASL10AQ92737 203 aa11.07□□□□□ -0.64
CUEDC1-207ENST00000577840 MSRB1Q9NZV6 116 aa11.07□□□□□ -0.64
CUEDC1-207ENST00000577840 HLA-DQA1P01909 254 aa11.06□□□□□ -0.64
CUEDC1-207ENST00000577840 MT-ND6P03923 174 aa11.06□□□□□ -0.64
CUEDC1-207ENST00000577840 GNB1LQ9BYB4 327 aa11.06□□□□□ -0.64
CUEDC1-207ENST00000577840 TMEM191AQ9H0A3 160 aa11.06□□□□□ -0.64
CUEDC1-207ENST00000577840 TRGV2A0A075B6R0 118 aa11.05□□□□□ -0.64
CUEDC1-207ENST00000577840 DEFB4AO15263 64 aa11.05□□□□□ -0.64
CUEDC1-207ENST00000577840 SPART-AS1P0CW21 52 aa11.05□□□□□ -0.64
CUEDC1-207ENST00000577840 RAB5AP20339 215 aa11.05□□□□□ -0.64
CUEDC1-207ENST00000577840 RPS10P46783 165 aaKnown RBP11.05□□□□□ -0.64
CUEDC1-207ENST00000577840 FAM222AQ5U5X8 452 aa11.05□□□□□ -0.64
CUEDC1-207ENST00000577840 Q6ZTI0 123 aa11.05□□□□□ -0.64
CUEDC1-207ENST00000577840 C11orf68Q9H3H3 251 aaKnown RBP11.05□□□□□ -0.64
CUEDC1-207ENST00000577840 DPH3P1Q9H4G8 78 aa11.05□□□□□ -0.64
CUEDC1-207ENST00000577840 TRAPPC1Q9Y5R8 145 aa11.05□□□□□ -0.64
CUEDC1-207ENST00000577840 EPPK1P58107 5090 aaKnown RBP11.05□□□□□ -0.64
CUEDC1-207ENST00000577840 GAGE12BA1L429 117 aa11.04□□□□□ -0.64
CUEDC1-207ENST00000577840 GAGE7O76087 117 aa11.04□□□□□ -0.64
CUEDC1-207ENST00000577840 NHLRC4P0CG21 123 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms