RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 CLUHP3Q96NS8 147 aa21.03■□□□□ 0.96
CTDNEP1-210ENST00000574322 HSBP1O75506 76 aa21.02■□□□□ 0.96
CTDNEP1-210ENST00000574322 AGRNO00468 2067 aa21.02■□□□□ 0.96
CTDNEP1-210ENST00000574322 LINC00614P0C842 121 aa21.01■□□□□ 0.95
CTDNEP1-210ENST00000574322 SPINK13Q1W4C9 94 aa21.01■□□□□ 0.95
CTDNEP1-210ENST00000574322 NSUN5P1Q3KNT7 163 aa21.01■□□□□ 0.95
CTDNEP1-210ENST00000574322 RNASEKQ6P5S7 137 aaKnown RBP21.01■□□□□ 0.95
CTDNEP1-210ENST00000574322 SMIM15Q7Z3B0 74 aa21.01■□□□□ 0.95
CTDNEP1-210ENST00000574322 PRELID3AQ96N28 172 aa21.01■□□□□ 0.95
CTDNEP1-210ENST00000574322 NXPH4O95158 308 aa21■□□□□ 0.95
CTDNEP1-210ENST00000574322 LAMTOR2Q9Y2Q5 125 aa21■□□□□ 0.95
CTDNEP1-210ENST00000574322 PMCHP20382 165 aa20.99■□□□□ 0.95
CTDNEP1-210ENST00000574322 CKS2P33552 79 aa20.99■□□□□ 0.95
CTDNEP1-210ENST00000574322 OR2K2Q8NGT1 345 aa20.99■□□□□ 0.95
CTDNEP1-210ENST00000574322 TRAV12-2A0A075B6T6 113 aa20.98■□□□□ 0.95
CTDNEP1-210ENST00000574322 EVI2AP22794 236 aa20.98■□□□□ 0.95
CTDNEP1-210ENST00000574322 KRTAP21-3Q3LHN1 58 aa20.98■□□□□ 0.95
CTDNEP1-210ENST00000574322 C3orf56Q8N813 242 aa20.98■□□□□ 0.95
CTDNEP1-210ENST00000574322 PHLDA3Q9Y5J5 127 aa20.98■□□□□ 0.95
CTDNEP1-210ENST00000574322 IGLV1-51P01701 117 aa20.98■□□□□ 0.95
CTDNEP1-210ENST00000574322 ODF3L2Q3SX64 289 aa20.98■□□□□ 0.95
CTDNEP1-210ENST00000574322 FAM19A2Q8N3H0 131 aa20.98■□□□□ 0.95
CTDNEP1-210ENST00000574322 RBMY1BA6NDE4 496 aaKnown RBP20.97■□□□□ 0.95
CTDNEP1-210ENST00000574322 RBMY1EA6NEQ0 496 aaKnown RBP20.97■□□□□ 0.95
CTDNEP1-210ENST00000574322 RBMY1DP0C7P1 496 aaKnown RBP20.97■□□□□ 0.95
CTDNEP1-210ENST00000574322 CDPF1Q6NVV7 123 aa20.97■□□□□ 0.95
CTDNEP1-210ENST00000574322 IGHV1OR15-1A0A075B7D0 117 aa20.96■□□□□ 0.95
CTDNEP1-210ENST00000574322 CRXO43186 299 aaPredicted RBP20.96■□□□□ 0.95
CTDNEP1-210ENST00000574322 CMC4P56277 68 aaPredicted RBP20.96■□□□□ 0.95
CTDNEP1-210ENST00000574322 WNK1Q9H4A3 2382 aa20.96■□□□□ 0.95
CTDNEP1-210ENST00000574322 ZNF124Q15973 351 aa20.95■□□□□ 0.94
CTDNEP1-210ENST00000574322 ZNF747Q9BV97 191 aa20.95■□□□□ 0.94
CTDNEP1-210ENST00000574322 TENM1Q9UKZ4 2725 aa20.95■□□□□ 0.94
CTDNEP1-210ENST00000574322 SAP30O75446 220 aa20.95■□□□□ 0.94
CTDNEP1-210ENST00000574322 CD7P09564 240 aa20.95■□□□□ 0.94
CTDNEP1-210ENST00000574322 TIMM8BQ9Y5J9 83 aaPredicted RBP20.95■□□□□ 0.94
CTDNEP1-210ENST00000574322 IGHV3-16A0A0C4DH30 117 aa20.94■□□□□ 0.94
CTDNEP1-210ENST00000574322 C9orf85Q96MD7 179 aa20.94■□□□□ 0.94
CTDNEP1-210ENST00000574322 CITED1Q99966 193 aa20.94■□□□□ 0.94
CTDNEP1-210ENST00000574322 FAM110AQ9BQ89 295 aa20.93■□□□□ 0.94
CTDNEP1-210ENST00000574322 NPYP01303 97 aa20.92■□□□□ 0.94
CTDNEP1-210ENST00000574322 M0R381 172 aa20.92■□□□□ 0.94
CTDNEP1-210ENST00000574322 PRSS3P2Q8NHM4 247 aa20.92■□□□□ 0.94
CTDNEP1-210ENST00000574322 IGHV1-24A0A0C4DH33 117 aa20.91■□□□□ 0.94
CTDNEP1-210ENST00000574322 SMKR1H3BMG3 65 aa20.91■□□□□ 0.94
CTDNEP1-210ENST00000574322 Q8N1Y9 231 aa20.91■□□□□ 0.94
CTDNEP1-210ENST00000574322 AP5S1Q9NUS5 200 aa20.91■□□□□ 0.94
CTDNEP1-210ENST00000574322 OR11H12B2RN74 326 aa20.9■□□□□ 0.94
CTDNEP1-210ENST00000574322 S100A12P80511 92 aa20.9■□□□□ 0.94
CTDNEP1-210ENST00000574322 DEFB125Q8N687 156 aa20.9■□□□□ 0.94
CTDNEP1-210ENST00000574322 LINC00482Q8N8I6 264 aa20.9■□□□□ 0.94
CTDNEP1-210ENST00000574322 MRAP2Q96G30 205 aa20.9■□□□□ 0.94
CTDNEP1-210ENST00000574322 DPH3P1Q9H4G8 78 aa20.9■□□□□ 0.94
CTDNEP1-210ENST00000574322 NCR2O95944 276 aa20.9■□□□□ 0.94
CTDNEP1-210ENST00000574322 RBMY1A1P0DJD3 496 aaKnown RBP20.9■□□□□ 0.94
CTDNEP1-210ENST00000574322 RBMY1CP0DJD4 496 aa20.9■□□□□ 0.94
CTDNEP1-210ENST00000574322 RBMY1FQ15415 496 aaKnown RBP20.9■□□□□ 0.94
CTDNEP1-210ENST00000574322 FA2HQ7L5A8 372 aa20.9■□□□□ 0.94
CTDNEP1-210ENST00000574322 C20orf144Q9BQM9 153 aa20.9■□□□□ 0.94
CTDNEP1-210ENST00000574322 MUC4Q99102 2169 aa20.89■□□□□ 0.93
CTDNEP1-210ENST00000574322 IFI27P40305 119 aaPredicted RBP20.89■□□□□ 0.93
CTDNEP1-210ENST00000574322 BEAN1Q3B7T3 259 aa20.89■□□□□ 0.93
CTDNEP1-210ENST00000574322 SHISA2Q6UWI4 295 aa20.89■□□□□ 0.93
CTDNEP1-210ENST00000574322 STAB1Q9NY15 2570 aa20.89■□□□□ 0.93
CTDNEP1-210ENST00000574322 TRGV11A0A075B6L2 103 aa20.88■□□□□ 0.93
CTDNEP1-210ENST00000574322 PRSS47A8MTI9 375 aa20.88■□□□□ 0.93
CTDNEP1-210ENST00000574322 TNFRSF6BO95407 300 aa20.88■□□□□ 0.93
CTDNEP1-210ENST00000574322 SCGB1D1O95968 90 aa20.88■□□□□ 0.93
CTDNEP1-210ENST00000574322 POM121L12Q8N7R1 296 aa20.88■□□□□ 0.93
CTDNEP1-210ENST00000574322 AP1S3Q96PC3 154 aa20.88■□□□□ 0.93
CTDNEP1-210ENST00000574322 LINC00467Q9BRT7 94 aa20.88■□□□□ 0.93
CTDNEP1-210ENST00000574322 GSN-AS1Q9NRJ2 163 aa20.88■□□□□ 0.93
CTDNEP1-210ENST00000574322 LINC01546A6NGU7 62 aa20.87■□□□□ 0.93
CTDNEP1-210ENST00000574322 SPRY2O43597 315 aa20.87■□□□□ 0.93
CTDNEP1-210ENST00000574322 FXYD7P58549 80 aa20.87■□□□□ 0.93
CTDNEP1-210ENST00000574322 GAS8-AS1O95177 125 aa20.87■□□□□ 0.93
CTDNEP1-210ENST00000574322 PF4P02776 101 aa20.87■□□□□ 0.93
CTDNEP1-210ENST00000574322 MAP1LC3AQ9H492 121 aa20.87■□□□□ 0.93
CTDNEP1-210ENST00000574322 MDFICQ9P1T7 246 aa20.87■□□□□ 0.93
CTDNEP1-210ENST00000574322 C3orf79P0CE67 100 aa20.86■□□□□ 0.93
CTDNEP1-210ENST00000574322 TRPT1Q86TN4 253 aaKnown RBP20.86■□□□□ 0.93
CTDNEP1-210ENST00000574322 NRACQ8N912 160 aa20.85■□□□□ 0.93
CTDNEP1-210ENST00000574322 KIF25-AS1Q9Y6Z4 181 aa20.85■□□□□ 0.93
CTDNEP1-210ENST00000574322 LOC389332A0A1B0GUA5 103 aa20.84■□□□□ 0.93
CTDNEP1-210ENST00000574322 KRTDAPP60985 99 aa20.84■□□□□ 0.93
CTDNEP1-210ENST00000574322 STHQ8IWL8 128 aa20.84■□□□□ 0.93
CTDNEP1-210ENST00000574322 Q8N976 141 aa20.84■□□□□ 0.93
CTDNEP1-210ENST00000574322 PCP4L1A6NKN8 68 aa20.84■□□□□ 0.93
CTDNEP1-210ENST00000574322 PMCHL1Q16048 86 aa20.84■□□□□ 0.93
CTDNEP1-210ENST00000574322 C14orf178Q8N769 122 aaPredicted RBP20.84■□□□□ 0.93
CTDNEP1-210ENST00000574322 NXT2Q9NPJ8 142 aaKnown RBP20.83■□□□□ 0.92
CTDNEP1-210ENST00000574322 GATA1P15976 413 aaPredicted RBP20.82■□□□□ 0.92
CTDNEP1-210ENST00000574322 C19orf73Q9NVV2 129 aa20.82■□□□□ 0.92
CTDNEP1-210ENST00000574322 LEPROTL1O95214 131 aa20.81■□□□□ 0.92
CTDNEP1-210ENST00000574322 LINC00315P59091 139 aa20.81■□□□□ 0.92
CTDNEP1-210ENST00000574322 SYT8Q8NBV8 401 aa20.81■□□□□ 0.92
CTDNEP1-210ENST00000574322 INSP01308 110 aa20.81■□□□□ 0.92
CTDNEP1-210ENST00000574322 CBY3A6NI87 242 aa20.8■□□□□ 0.92
CTDNEP1-210ENST00000574322 BTF3P20290 206 aaKnown RBP20.79■□□□□ 0.92
CTDNEP1-210ENST00000574322 TEX43Q6ZNM6 134 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 152.1 ms