RNA–Protein interactions for RNA: ENST00000568454.5

TSC2-222, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TSC2, Length 5,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-222ENST00000568454 DOCK8Q8NF50 2099 aa12.93□□□□□ -0.34
TSC2-222ENST00000568454 LY6G6EA0A0G2JKS1 128 aa12.93□□□□□ -0.34
TSC2-222ENST00000568454 ATP5G1P05496 136 aa12.93□□□□□ -0.34
TSC2-222ENST00000568454 DEFB121Q5J5C9 76 aa12.93□□□□□ -0.34
TSC2-222ENST00000568454 BAALCQ8WXS3 180 aa12.93□□□□□ -0.34
TSC2-222ENST00000568454 U3KQA8 63 aa12.93□□□□□ -0.34
TSC2-222ENST00000568454 TRBV6-1A0A0K0K1D8 114 aa12.93□□□□□ -0.34
TSC2-222ENST00000568454 RNF223E7ERA6 249 aa12.93□□□□□ -0.34
TSC2-222ENST00000568454 ODF1Q14990 250 aa12.93□□□□□ -0.34
TSC2-222ENST00000568454 CLPSL2Q6UWE3 100 aa12.93□□□□□ -0.34
TSC2-222ENST00000568454 C22orf46C9J442 243 aa12.92□□□□□ -0.34
TSC2-222ENST00000568454 JMJD7-PLA2G4BH0Y9G9 81 aa12.92□□□□□ -0.34
TSC2-222ENST00000568454 C11orf86A6NJI1 115 aa12.92□□□□□ -0.34
TSC2-222ENST00000568454 SPTAN1Q13813 2472 aaKnown RBP12.92□□□□□ -0.34
TSC2-222ENST00000568454 CREBBPQ92793 2442 aa12.92□□□□□ -0.34
TSC2-222ENST00000568454 NPBQ8NG41 125 aa12.92□□□□□ -0.34
TSC2-222ENST00000568454 CTSZQ9UBR2 303 aa12.92□□□□□ -0.34
TSC2-222ENST00000568454 CACNA1GO43497 2377 aa12.92□□□□□ -0.34
TSC2-222ENST00000568454 IGLV11-55A0A075B6I3 123 aa12.91□□□□□ -0.34
TSC2-222ENST00000568454 SPATA12Q7Z6I5 190 aa12.91□□□□□ -0.34
TSC2-222ENST00000568454 LGALS9O00182 355 aa12.91□□□□□ -0.34
TSC2-222ENST00000568454 SPTBN2O15020 2390 aa12.91□□□□□ -0.34
TSC2-222ENST00000568454 MED14OSP0DP75 135 aa12.91□□□□□ -0.34
TSC2-222ENST00000568454 LHBP01229 141 aa12.91□□□□□ -0.34
TSC2-222ENST00000568454 C5orf38Q86SI9 138 aa12.91□□□□□ -0.34
TSC2-222ENST00000568454 NOP10Q9NPE3 64 aaKnown RBP12.91□□□□□ -0.34
TSC2-222ENST00000568454 SPRY2O43597 315 aa12.9□□□□□ -0.34
TSC2-222ENST00000568454 HOXB4P17483 251 aaPredicted RBP12.9□□□□□ -0.34
TSC2-222ENST00000568454 COX7B2Q8TF08 81 aa12.9□□□□□ -0.34
TSC2-222ENST00000568454 FAM215AQ9Y5M1 114 aa12.9□□□□□ -0.34
TSC2-222ENST00000568454 PRR30Q53SZ7 412 aaPredicted RBP12.89□□□□□ -0.35
TSC2-222ENST00000568454 A0A096LPF7 62 aa12.89□□□□□ -0.35
TSC2-222ENST00000568454 C2orf70A6NJV1 201 aa12.89□□□□□ -0.35
TSC2-222ENST00000568454 MP68P56378 58 aa12.89□□□□□ -0.35
TSC2-222ENST00000568454 ZNF407Q9C0G0 2248 aa12.89□□□□□ -0.35
TSC2-222ENST00000568454 DAZ2Q13117 558 aaKnown RBP12.89□□□□□ -0.35
TSC2-222ENST00000568454 DAZ4Q86SG3 579 aaKnown RBP12.89□□□□□ -0.35
TSC2-222ENST00000568454 DAZ3Q9NR90 486 aaKnown RBP12.89□□□□□ -0.35
TSC2-222ENST00000568454 ACACAQ13085 2346 aa12.89□□□□□ -0.35
TSC2-222ENST00000568454 BUB3O43684 328 aa12.88□□□□□ -0.35
TSC2-222ENST00000568454 PLXNA2O75051 1894 aa12.88□□□□□ -0.35
TSC2-222ENST00000568454 NOTCH3Q9UM47 2321 aa12.88□□□□□ -0.35
TSC2-222ENST00000568454 CTSGP08311 255 aa12.88□□□□□ -0.35
TSC2-222ENST00000568454 HIST2H2BCQ6DN03 193 aa12.88□□□□□ -0.35
TSC2-222ENST00000568454 C11orf1Q9H5F2 150 aa12.88□□□□□ -0.35
TSC2-222ENST00000568454 WI2-2373I1.2A0A1W2PRP0 233 aa12.88□□□□□ -0.35
TSC2-222ENST00000568454 CRYGBP07316 175 aa12.88□□□□□ -0.35
TSC2-222ENST00000568454 C16orf54Q6UWD8 224 aa12.88□□□□□ -0.35
TSC2-222ENST00000568454 VSIG2Q96IQ7 327 aa12.88□□□□□ -0.35
TSC2-222ENST00000568454 KMT2EQ8IZD2 1858 aa12.87□□□□□ -0.35
TSC2-222ENST00000568454 LINC00643Q86TS7 51 aa12.87□□□□□ -0.35
TSC2-222ENST00000568454 RNF138Q8WVD3 245 aa12.87□□□□□ -0.35
TSC2-222ENST00000568454 NLRC5Q86WI3 1866 aa12.87□□□□□ -0.35
TSC2-222ENST00000568454 USF3Q68DE3 2245 aa12.87□□□□□ -0.35
TSC2-222ENST00000568454 DEFB105AQ8NG35 78 aa12.87□□□□□ -0.35
TSC2-222ENST00000568454 K7EQD1 137 aa12.87□□□□□ -0.35
TSC2-222ENST00000568454 NDUFS5O43920 106 aa12.87□□□□□ -0.35
TSC2-222ENST00000568454 C9orf47Q6ZRZ4 202 aa12.87□□□□□ -0.35
TSC2-222ENST00000568454 DOCK7Q96N67 2140 aa12.87□□□□□ -0.35
TSC2-222ENST00000568454 RPL39P62891 51 aaKnown RBP12.87□□□□□ -0.35
TSC2-222ENST00000568454 WFDC9Q8NEX5 89 aa12.87□□□□□ -0.35
TSC2-222ENST00000568454 CENPVL3A0A0U1RRI6 287 aa12.86□□□□□ -0.35
TSC2-222ENST00000568454 C19orf71A6NCJ1 209 aa12.86□□□□□ -0.35
TSC2-222ENST00000568454 K7ENP7 123 aa12.86□□□□□ -0.35
TSC2-222ENST00000568454 FRMD6-AS1P0C7T7 363 aa12.86□□□□□ -0.35
TSC2-222ENST00000568454 NREPQ16612 68 aa12.86□□□□□ -0.35
TSC2-222ENST00000568454 EML6Q6ZMW3 1958 aa12.86□□□□□ -0.35
TSC2-222ENST00000568454 IGHV7-81A0A0B4J1V7 117 aa12.86□□□□□ -0.35
TSC2-222ENST00000568454 ETDCA0A1B0GVM5 59 aa12.86□□□□□ -0.35
TSC2-222ENST00000568454 NDUFA11Q86Y39 141 aa12.85□□□□□ -0.35
TSC2-222ENST00000568454 TMEM61Q8N0U2 210 aa12.85□□□□□ -0.35
TSC2-222ENST00000568454 CLEC2BQ92478 149 aa12.85□□□□□ -0.35
TSC2-222ENST00000568454 Q6ZUT4 128 aa12.85□□□□□ -0.35
TSC2-222ENST00000568454 LECT2O14960 151 aa12.84□□□□□ -0.35
TSC2-222ENST00000568454 NCOR1O75376 2440 aa12.84□□□□□ -0.35
TSC2-222ENST00000568454 A0A1B0GXF2 115 aa12.84□□□□□ -0.35
TSC2-222ENST00000568454 COX7A2LO14548 114 aa12.84□□□□□ -0.35
TSC2-222ENST00000568454 PTH2Q96A98 100 aa12.84□□□□□ -0.35
TSC2-222ENST00000568454 Q6ZQT7 251 aa12.83□□□□□ -0.36
TSC2-222ENST00000568454 IGKV1OR2-108A0A075B7D4 117 aa12.83□□□□□ -0.36
TSC2-222ENST00000568454 DAND5Q8N907 189 aa12.83□□□□□ -0.36
TSC2-222ENST00000568454 PRSS33Q8NF86 280 aa12.83□□□□□ -0.36
TSC2-222ENST00000568454 UBE2BP63146 152 aa12.83□□□□□ -0.36
TSC2-222ENST00000568454 HELZP42694 1942 aaKnown RBP12.83□□□□□ -0.36
TSC2-222ENST00000568454 CACNA1HO95180 2353 aa12.83□□□□□ -0.36
TSC2-222ENST00000568454 IGHV1-58A0A0C4DH39 117 aa12.83□□□□□ -0.36
TSC2-222ENST00000568454 CHD3Q12873 2000 aaKnown RBP12.83□□□□□ -0.36
TSC2-222ENST00000568454 C16orf74Q96GX8 76 aa12.83□□□□□ -0.36
TSC2-222ENST00000568454 RNF183Q96D59 192 aa12.82□□□□□ -0.36
TSC2-222ENST00000568454 IGKV2D-24A0A075B6R9 120 aa12.82□□□□□ -0.36
TSC2-222ENST00000568454 MRPL23Q16540 153 aaKnown RBP12.82□□□□□ -0.36
TSC2-222ENST00000568454 MGAMO43451 1857 aa12.82□□□□□ -0.36
TSC2-222ENST00000568454 PRAC2D3DTV9 90 aa12.82□□□□□ -0.36
TSC2-222ENST00000568454 C3orf56Q8N813 242 aa12.82□□□□□ -0.36
TSC2-222ENST00000568454 CACNA1BQ00975 2339 aa12.82□□□□□ -0.36
TSC2-222ENST00000568454 IGHV4-4A0A075B6R2 117 aa12.81□□□□□ -0.36
TSC2-222ENST00000568454 PRB1P04280 392 aa12.81□□□□□ -0.36
TSC2-222ENST00000568454 VPREB3Q9UKI3 123 aa12.81□□□□□ -0.36
TSC2-222ENST00000568454 SHANK1Q9Y566 2161 aa12.81□□□□□ -0.36
TSC2-222ENST00000568454 MAPK1IP1LQ8NDC0 245 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms