RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 KLHL30-AS1Q8NEE0 82 aa13.52□□□□□ -0.24
SMPD3-211ENST00000568373 OR9G4Q8NGQ1 327 aa13.52□□□□□ -0.24
SMPD3-211ENST00000568373 DUX3Q96PT4 197 aa13.52□□□□□ -0.24
SMPD3-211ENST00000568373 PEMTQ9UBM1 199 aa13.52□□□□□ -0.24
SMPD3-211ENST00000568373 ANK3Q12955 4377 aaKnown RBP13.52□□□□□ -0.24
SMPD3-211ENST00000568373 SORL1Q92673 2214 aa13.52□□□□□ -0.24
SMPD3-211ENST00000568373 LINC01545Q5VT33 79 aa13.52□□□□□ -0.25
SMPD3-211ENST00000568373 NRACQ8N912 160 aa13.52□□□□□ -0.25
SMPD3-211ENST00000568373 UQCR10Q9UDW1 63 aa13.52□□□□□ -0.25
SMPD3-211ENST00000568373 TRAV26-2A0A0B4J265 109 aa13.51□□□□□ -0.25
SMPD3-211ENST00000568373 TRAV12-3A0A0B4J271 114 aa13.51□□□□□ -0.25
SMPD3-211ENST00000568373 H0Y8G0 127 aa13.51□□□□□ -0.25
SMPD3-211ENST00000568373 SPRY2O43597 315 aa13.51□□□□□ -0.25
SMPD3-211ENST00000568373 IGLL1P15814 213 aa13.51□□□□□ -0.25
SMPD3-211ENST00000568373 MRAP2Q96G30 205 aa13.51□□□□□ -0.25
SMPD3-211ENST00000568373 EREGO14944 169 aa13.51□□□□□ -0.25
SMPD3-211ENST00000568373 DUSP14O95147 198 aaKnown RBP13.51□□□□□ -0.25
SMPD3-211ENST00000568373 IGKV3-20P01619 116 aa13.51□□□□□ -0.25
SMPD3-211ENST00000568373 FXYD7P58549 80 aa13.51□□□□□ -0.25
SMPD3-211ENST00000568373 FOXI2Q6ZQN5 318 aa13.51□□□□□ -0.25
SMPD3-211ENST00000568373 DEFB125Q8N687 156 aa13.51□□□□□ -0.25
SMPD3-211ENST00000568373 SNHG12Q9BXW3 62 aa13.51□□□□□ -0.25
SMPD3-211ENST00000568373 AGRNO00468 2067 aa13.51□□□□□ -0.25
SMPD3-211ENST00000568373 C2orf88Q9BSF0 95 aa13.5□□□□□ -0.25
SMPD3-211ENST00000568373 MCRIP2Q9BUT9 160 aaKnown RBP13.5□□□□□ -0.25
SMPD3-211ENST00000568373 PRSS47A8MTI9 375 aa13.49□□□□□ -0.25
SMPD3-211ENST00000568373 M0R143 59 aa13.49□□□□□ -0.25
SMPD3-211ENST00000568373 Q8N8P6 123 aa13.49□□□□□ -0.25
SMPD3-211ENST00000568373 DLX4Q92988 240 aaPredicted RBP13.49□□□□□ -0.25
SMPD3-211ENST00000568373 DPH3P1Q9H4G8 78 aa13.49□□□□□ -0.25
SMPD3-211ENST00000568373 IGLV2-18A0A075B6J9 118 aa13.49□□□□□ -0.25
SMPD3-211ENST00000568373 NXPH4O95158 308 aa13.49□□□□□ -0.25
SMPD3-211ENST00000568373 TSPOP30536 169 aa13.49□□□□□ -0.25
SMPD3-211ENST00000568373 CDKN1BP46527 198 aa13.49□□□□□ -0.25
SMPD3-211ENST00000568373 MRPL52Q86TS9 123 aaKnown RBP13.49□□□□□ -0.25
SMPD3-211ENST00000568373 HIST2H2BDQ6DRA6 164 aa13.48□□□□□ -0.25
SMPD3-211ENST00000568373 CUBNO60494 3623 aa13.48□□□□□ -0.25
SMPD3-211ENST00000568373 MUC4Q99102 2169 aa13.48□□□□□ -0.25
SMPD3-211ENST00000568373 TRAV12-2A0A075B6T6 113 aa13.48□□□□□ -0.25
SMPD3-211ENST00000568373 TRAV2A0A0B4J234 112 aa13.48□□□□□ -0.25
SMPD3-211ENST00000568373 MTORP42345 2549 aa13.48□□□□□ -0.25
SMPD3-211ENST00000568373 C14orf178Q8N769 122 aaPredicted RBP13.48□□□□□ -0.25
SMPD3-211ENST00000568373 AP1S3Q96PC3 154 aa13.48□□□□□ -0.25
SMPD3-211ENST00000568373 A0A1B0GV90 55 aa13.47□□□□□ -0.25
SMPD3-211ENST00000568373 CD7P09564 240 aa13.47□□□□□ -0.25
SMPD3-211ENST00000568373 SPINK13Q1W4C9 94 aa13.47□□□□□ -0.25
SMPD3-211ENST00000568373 TMEM61Q8N0U2 210 aa13.47□□□□□ -0.25
SMPD3-211ENST00000568373 PMCHL2Q9BQD1 86 aa13.47□□□□□ -0.25
SMPD3-211ENST00000568373 ST20Q9HBF5 79 aa13.47□□□□□ -0.25
SMPD3-211ENST00000568373 hDV102S1A0JD36 115 aa13.46□□□□□ -0.25
SMPD3-211ENST00000568373 CYSRT1A8MQ03 144 aa13.46□□□□□ -0.25
SMPD3-211ENST00000568373 FCER1GP30273 86 aa13.46□□□□□ -0.25
SMPD3-211ENST00000568373 AMTNQ6UX39 209 aa13.46□□□□□ -0.25
SMPD3-211ENST00000568373 Q6ZN92 141 aa13.46□□□□□ -0.25
SMPD3-211ENST00000568373 RNASE1P07998 156 aaKnown RBP13.46□□□□□ -0.26
SMPD3-211ENST00000568373 IFI27L1Q96BM0 104 aa13.46□□□□□ -0.26
SMPD3-211ENST00000568373 HSBP1L1C9JCN9 74 aa13.45□□□□□ -0.26
SMPD3-211ENST00000568373 SCGB2A2Q13296 93 aa13.45□□□□□ -0.26
SMPD3-211ENST00000568373 DYNLRB2Q8TF09 96 aa13.45□□□□□ -0.26
SMPD3-211ENST00000568373 DEFB131AP59861 70 aa13.44□□□□□ -0.26
SMPD3-211ENST00000568373 HNRNPA3P51991 378 aaKnown RBP13.44□□□□□ -0.26
SMPD3-211ENST00000568373 LGALS9BQ3B8N2 356 aa13.44□□□□□ -0.26
SMPD3-211ENST00000568373 LGALS9CQ6DKI2 356 aa13.44□□□□□ -0.26
SMPD3-211ENST00000568373 RAX2Q96IS3 184 aa13.44□□□□□ -0.26
SMPD3-211ENST00000568373 IGHV3-16A0A0C4DH30 117 aa13.43□□□□□ -0.26
SMPD3-211ENST00000568373 MGPP08493 103 aa13.43□□□□□ -0.26
SMPD3-211ENST00000568373 C11orf44Q8N8P7 122 aa13.43□□□□□ -0.26
SMPD3-211ENST00000568373 RASL10AQ92737 203 aa13.43□□□□□ -0.26
SMPD3-211ENST00000568373 IGHV1OR15-1A0A075B7D0 117 aa13.43□□□□□ -0.26
SMPD3-211ENST00000568373 KNCNA6PVL3 124 aa13.43□□□□□ -0.26
SMPD3-211ENST00000568373 CD28P10747 220 aa13.43□□□□□ -0.26
SMPD3-211ENST00000568373 HLA-DRB4P13762 266 aa13.43□□□□□ -0.26
SMPD3-211ENST00000568373 FHL3Q13643 280 aa13.43□□□□□ -0.26
SMPD3-211ENST00000568373 DEFB114Q30KQ6 69 aa13.43□□□□□ -0.26
SMPD3-211ENST00000568373 POM121L12Q8N7R1 296 aa13.43□□□□□ -0.26
SMPD3-211ENST00000568373 TMEM158Q8WZ71 300 aa13.43□□□□□ -0.26
SMPD3-211ENST00000568373 C9orf85Q96MD7 179 aa13.43□□□□□ -0.26
SMPD3-211ENST00000568373 C16orf95Q9H693 158 aa13.43□□□□□ -0.26
SMPD3-211ENST00000568373 HLA-DRB4X5D2U9 266 aa13.43□□□□□ -0.26
SMPD3-211ENST00000568373 A8MTW9 85 aa13.42□□□□□ -0.26
SMPD3-211ENST00000568373 LAGE3Q14657 143 aa13.42□□□□□ -0.26
SMPD3-211ENST00000568373 Q8N1Y9 231 aa13.42□□□□□ -0.26
SMPD3-211ENST00000568373 LINC01006Q8NI28 216 aa13.42□□□□□ -0.26
SMPD3-211ENST00000568373 SMIM2Q9BVW6 85 aa13.42□□□□□ -0.26
SMPD3-211ENST00000568373 GOLT1BQ9Y3E0 138 aa13.42□□□□□ -0.26
SMPD3-211ENST00000568373 KIF25-AS1Q9Y6Z4 181 aa13.42□□□□□ -0.26
SMPD3-211ENST00000568373 A0A1W2PRX2 142 aa13.41□□□□□ -0.26
SMPD3-211ENST00000568373 SUMO2P61956 95 aaKnown RBP13.41□□□□□ -0.26
SMPD3-211ENST00000568373 C18orf15Q96N68 181 aa13.41□□□□□ -0.26
SMPD3-211ENST00000568373 C20orf78Q9BR46 151 aa13.41□□□□□ -0.26
SMPD3-211ENST00000568373 H3BMM0 161 aa13.41□□□□□ -0.26
SMPD3-211ENST00000568373 SMIM17P0DL12 118 aa13.41□□□□□ -0.26
SMPD3-211ENST00000568373 LINC00315P59091 139 aa13.41□□□□□ -0.26
SMPD3-211ENST00000568373 MDFICQ9P1T7 246 aa13.41□□□□□ -0.26
SMPD3-211ENST00000568373 SETD2Q9BYW2 2564 aaPredicted RBP13.41□□□□□ -0.26
SMPD3-211ENST00000568373 CCL24O00175 119 aa13.4□□□□□ -0.26
SMPD3-211ENST00000568373 TCAPO15273 167 aa13.4□□□□□ -0.26
SMPD3-211ENST00000568373 ZNF124Q15973 351 aa13.4□□□□□ -0.26
SMPD3-211ENST00000568373 CD300EQ496F6 205 aaPredicted RBP13.4□□□□□ -0.26
SMPD3-211ENST00000568373 RPL39LQ96EH5 51 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms