RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 CIDEAO60543 219 aa12.73□□□□□ -0.37
LINC01238-205ENST00000567549 OR4C5Q8NGB2 326 aa12.73□□□□□ -0.37
LINC01238-205ENST00000567549 SDF2L1Q9HCN8 221 aa12.73□□□□□ -0.37
LINC01238-205ENST00000567549 VAX2Q9UIW0 290 aa12.73□□□□□ -0.37
LINC01238-205ENST00000567549 NAGKQ9UJ70 344 aa12.73□□□□□ -0.37
LINC01238-205ENST00000567549 PGPA6NDG6 321 aa12.72□□□□□ -0.37
LINC01238-205ENST00000567549 K7EQD1 137 aa12.72□□□□□ -0.37
LINC01238-205ENST00000567549 M0R2P5 195 aa12.72□□□□□ -0.37
LINC01238-205ENST00000567549 GYPEP15421 78 aa12.72□□□□□ -0.37
LINC01238-205ENST00000567549 KRTAP10-2P60368 255 aa12.72□□□□□ -0.37
LINC01238-205ENST00000567549 SRSF3P84103 164 aaKnown RBP12.72□□□□□ -0.37
LINC01238-205ENST00000567549 Q6ZRN7 208 aaPredicted RBP12.72□□□□□ -0.37
LINC01238-205ENST00000567549 MDFICQ9P1T7 246 aa12.72□□□□□ -0.37
LINC01238-205ENST00000567549 HMGB3O15347 200 aaKnown RBP12.71□□□□□ -0.37
LINC01238-205ENST00000567549 BCL2P10415 239 aa12.71□□□□□ -0.37
LINC01238-205ENST00000567549 SUN5Q8TC36 379 aa12.71□□□□□ -0.37
LINC01238-205ENST00000567549 SEC11CQ9BY50 192 aa12.71□□□□□ -0.37
LINC01238-205ENST00000567549 KRTAP4-5Q9BYR2 181 aa12.71□□□□□ -0.37
LINC01238-205ENST00000567549 TMEM167BQ9NRX6 74 aa12.71□□□□□ -0.37
LINC01238-205ENST00000567549 MSRB1Q9NZV6 116 aa12.71□□□□□ -0.37
LINC01238-205ENST00000567549 RPH3ALQ9UNE2 315 aa12.71□□□□□ -0.37
LINC01238-205ENST00000567549 F8W036 122 aa12.7□□□□□ -0.38
LINC01238-205ENST00000567549 ZNF479Q96JC4 524 aa12.7□□□□□ -0.38
LINC01238-205ENST00000567549 ABCA13Q86UQ4 5058 aa12.7□□□□□ -0.38
LINC01238-205ENST00000567549 SFTA3P0C7M3 94 aa12.69□□□□□ -0.38
LINC01238-205ENST00000567549 ARL14EPLP0DKL9 152 aa12.69□□□□□ -0.38
LINC01238-205ENST00000567549 GCHFRP30047 84 aa12.69□□□□□ -0.38
LINC01238-205ENST00000567549 C10orf91Q5T1B1 145 aa12.69□□□□□ -0.38
LINC01238-205ENST00000567549 GOLT1AQ6ZVE7 132 aa12.69□□□□□ -0.38
LINC01238-205ENST00000567549 SRP19P09132 144 aaKnown RBP12.68□□□□□ -0.38
LINC01238-205ENST00000567549 DNAH10OSP0CZ25 163 aa12.68□□□□□ -0.38
LINC01238-205ENST00000567549 TIRAPP58753 221 aa12.68□□□□□ -0.38
LINC01238-205ENST00000567549 Q6ZQT7 251 aa12.68□□□□□ -0.38
LINC01238-205ENST00000567549 NHLRC2Q8NBF2 726 aa12.68□□□□□ -0.38
LINC01238-205ENST00000567549 CARHSP1Q9Y2V2 147 aaKnown RBP12.68□□□□□ -0.38
LINC01238-205ENST00000567549 ARL2-SNX15V9GYD0 113 aa12.68□□□□□ -0.38
LINC01238-205ENST00000567549 FBLL1A6NHQ2 334 aaKnown RBP12.67□□□□□ -0.38
LINC01238-205ENST00000567549 C9JQL5 133 aa12.67□□□□□ -0.38
LINC01238-205ENST00000567549 EIF3GO75821 320 aaKnown RBP eCLIP12.67□□□□□ -0.38
LINC01238-205ENST00000567549 PFN1P07737 140 aaKnown RBP12.67□□□□□ -0.38
LINC01238-205ENST00000567549 PRADC1Q9BSG0 188 aa12.67□□□□□ -0.38
LINC01238-205ENST00000567549 TRAV8-6A0A0B4J262 113 aa12.66□□□□□ -0.38
LINC01238-205ENST00000567549 IGHV3-16A0A0C4DH30 117 aa12.66□□□□□ -0.38
LINC01238-205ENST00000567549 EPM2AB3EWF7 344 aa12.66□□□□□ -0.38
LINC01238-205ENST00000567549 PSCAO43653 123 aa12.66□□□□□ -0.38
LINC01238-205ENST00000567549 CRYGDP07320 174 aa12.66□□□□□ -0.38
LINC01238-205ENST00000567549 MEF2BQ02080 365 aaPredicted RBP12.66□□□□□ -0.38
LINC01238-205ENST00000567549 C5orf17Q8NAS9 161 aa12.66□□□□□ -0.38
LINC01238-205ENST00000567549 HSPG2P98160 4391 aa12.66□□□□□ -0.38
LINC01238-205ENST00000567549 TMEM250H0YL14 139 aa12.65□□□□□ -0.38
LINC01238-205ENST00000567549 PDE6DO43924 150 aa12.65□□□□□ -0.38
LINC01238-205ENST00000567549 PAGE4O60829 102 aa12.65□□□□□ -0.38
LINC01238-205ENST00000567549 APOC3P02656 99 aa12.65□□□□□ -0.38
LINC01238-205ENST00000567549 SVBPQ8N300 66 aa12.65□□□□□ -0.38
LINC01238-205ENST00000567549 A0A087WTM6 91 aa12.64□□□□□ -0.39
LINC01238-205ENST00000567549 F6UZH7 168 aa12.64□□□□□ -0.39
LINC01238-205ENST00000567549 WFDC10BQ8IUB3 73 aa12.64□□□□□ -0.39
LINC01238-205ENST00000567549 NKX6-2Q9C056 277 aaPredicted RBP12.64□□□□□ -0.39
LINC01238-205ENST00000567549 IGHV3-38A0A0C4DH36 116 aa12.63□□□□□ -0.39
LINC01238-205ENST00000567549 GNRH2O43555 120 aa12.63□□□□□ -0.39
LINC01238-205ENST00000567549 TYMSP04818 313 aa12.63□□□□□ -0.39
LINC01238-205ENST00000567549 RHOHQ15669 191 aa12.63□□□□□ -0.39
LINC01238-205ENST00000567549 ZNF876PQ49A33 203 aa12.63□□□□□ -0.39
LINC01238-205ENST00000567549 FAM74A3Q4VXF1 159 aa12.63□□□□□ -0.39
LINC01238-205ENST00000567549 CST9LP1Q5W188 147 aa12.63□□□□□ -0.39
LINC01238-205ENST00000567549 FRZBQ92765 325 aa12.63□□□□□ -0.39
LINC01238-205ENST00000567549 A0A1W2PRE2 83 aa12.62□□□□□ -0.39
LINC01238-205ENST00000567549 SNAPINO95295 136 aa12.62□□□□□ -0.39
LINC01238-205ENST00000567549 GATA1P15976 413 aaPredicted RBP12.62□□□□□ -0.39
LINC01238-205ENST00000567549 DMRTA1Q5VZB9 504 aa12.62□□□□□ -0.39
LINC01238-205ENST00000567549 LRP1BQ9NZR2 4599 aa12.62□□□□□ -0.39
LINC01238-205ENST00000567549 TRBV6-4A0A1B0GX49 114 aa12.61□□□□□ -0.39
LINC01238-205ENST00000567549 FAM74A7A6NL05 159 aa12.61□□□□□ -0.39
LINC01238-205ENST00000567549 ADCYAP1P18509 176 aa12.61□□□□□ -0.39
LINC01238-205ENST00000567549 UBE2G2P60604 165 aa12.61□□□□□ -0.39
LINC01238-205ENST00000567549 SMUG1Q53HV7 270 aa12.61□□□□□ -0.39
LINC01238-205ENST00000567549 LINC01556Q5JQF7 62 aa12.61□□□□□ -0.39
LINC01238-205ENST00000567549 SAPCD1Q5SSQ6 148 aa12.61□□□□□ -0.39
LINC01238-205ENST00000567549 CYB561D1Q8N8Q1 229 aa12.61□□□□□ -0.39
LINC01238-205ENST00000567549 NTN5Q8WTR8 489 aaPredicted RBP12.61□□□□□ -0.39
LINC01238-205ENST00000567549 TRAV8-1A0A0A6YYK1 113 aa12.6□□□□□ -0.39
LINC01238-205ENST00000567549 TCRAP04437 139 aa12.6□□□□□ -0.39
LINC01238-205ENST00000567549 MGST1P10620 155 aaKnown RBP12.6□□□□□ -0.39
LINC01238-205ENST00000567549 OR10J3Q5JRS4 329 aa12.6□□□□□ -0.39
LINC01238-205ENST00000567549 PTH2Q96A98 100 aa12.6□□□□□ -0.39
LINC01238-205ENST00000567549 GCSHP23434 173 aa12.59□□□□□ -0.39
LINC01238-205ENST00000567549 CEBPGP53567 150 aa12.59□□□□□ -0.39
LINC01238-205ENST00000567549 TNFRSF18Q9Y5U5 241 aa12.59□□□□□ -0.39
LINC01238-205ENST00000567549 GCGP01275 180 aa12.58□□□□□ -0.4
LINC01238-205ENST00000567549 GNG5P63218 68 aa12.58□□□□□ -0.4
LINC01238-205ENST00000567549 FLI1Q01543 452 aaPredicted RBP12.58□□□□□ -0.4
LINC01238-205ENST00000567549 TMEM75Q8N9X5 138 aa12.58□□□□□ -0.4
LINC01238-205ENST00000567549 TCEAL7Q9BRU2 100 aa12.58□□□□□ -0.4
LINC01238-205ENST00000567549 ZNF727A8MUV8 499 aa12.57□□□□□ -0.4
LINC01238-205ENST00000567549 RS1O15537 224 aa12.57□□□□□ -0.4
LINC01238-205ENST00000567549 PIK3CD-AS1Q5SR53 167 aa12.57□□□□□ -0.4
LINC01238-205ENST00000567549 LELP1Q5T871 98 aa12.57□□□□□ -0.4
LINC01238-205ENST00000567549 SLC25A29Q8N8R3 303 aa12.57□□□□□ -0.4
LINC01238-205ENST00000567549 CLRN3Q8NCR9 226 aa12.57□□□□□ -0.4
LINC01238-205ENST00000567549 TVP23CQ96ET8 276 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms