RNA–Protein interactions for RNA: ENST00000567143.1

GINS3-206, Transcript of GINS complex subunit 3, humanhuman

Gene GINS3, Length 3,202 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-206ENST00000567143 C20orf173Q96LM9 149 aa4.94□□□□□ -1.62
GINS3-206ENST00000567143 NXT2Q9NPJ8 142 aaKnown RBP4.94□□□□□ -1.62
GINS3-206ENST00000567143 PHLDA3Q9Y5J5 127 aa4.94□□□□□ -1.62
GINS3-206ENST00000567143 TSSC4Q9Y5U2 329 aaPredicted RBP4.94□□□□□ -1.62
GINS3-206ENST00000567143 TRAV8-2A0A0B4J237 113 aa4.93□□□□□ -1.62
GINS3-206ENST00000567143 CLPSL1A2RUU4 121 aa4.93□□□□□ -1.62
GINS3-206ENST00000567143 SCGB2A1O75556 95 aa4.93□□□□□ -1.62
GINS3-206ENST00000567143 RPS20P60866 119 aaKnown RBP4.93□□□□□ -1.62
GINS3-206ENST00000567143 SRSF9Q13242 221 aaKnown RBP eCLIP4.93□□□□□ -1.62
GINS3-206ENST00000567143 HIST2H2BDQ6DRA6 164 aa4.93□□□□□ -1.62
GINS3-206ENST00000567143 PF4V1P10720 104 aa4.93□□□□□ -1.62
GINS3-206ENST00000567143 HLA-DRB4P13762 266 aa4.93□□□□□ -1.62
GINS3-206ENST00000567143 TMEM95Q3KNT9 176 aa4.93□□□□□ -1.62
GINS3-206ENST00000567143 LY6G5BQ8NDX9 201 aa4.93□□□□□ -1.62
GINS3-206ENST00000567143 RNF5Q99942 180 aa4.93□□□□□ -1.62
GINS3-206ENST00000567143 HLA-DRB4X5D2U9 266 aa4.93□□□□□ -1.62
GINS3-206ENST00000567143 ODF3BA8MYP8 253 aa4.93□□□□□ -1.62
GINS3-206ENST00000567143 OR11H12B2RN74 326 aa4.93□□□□□ -1.62
GINS3-206ENST00000567143 G3V4G9 280 aa4.93□□□□□ -1.62
GINS3-206ENST00000567143 OR11H1Q8NG94 326 aa4.93□□□□□ -1.62
GINS3-206ENST00000567143 OR11H2Q8NH07 326 aa4.93□□□□□ -1.62
GINS3-206ENST00000567143 DPF1Q92782 380 aa4.93□□□□□ -1.62
GINS3-206ENST00000567143 PTH2Q96A98 100 aa4.93□□□□□ -1.62
GINS3-206ENST00000567143 ZFAND3Q9H8U3 227 aa4.93□□□□□ -1.62
GINS3-206ENST00000567143 ZNF256Q9Y2P7 627 aaPredicted RBP4.93□□□□□ -1.62
GINS3-206ENST00000567143 A0A1B0GWB2 263 aa4.92□□□□□ -1.62
GINS3-206ENST00000567143 RPL39P62891 51 aaKnown RBP4.92□□□□□ -1.62
GINS3-206ENST00000567143 ANXA2RQ3ZCQ2 193 aa4.92□□□□□ -1.62
GINS3-206ENST00000567143 Q6ZS46 218 aa4.92□□□□□ -1.62
GINS3-206ENST00000567143 CEND1Q8N111 149 aa4.92□□□□□ -1.62
GINS3-206ENST00000567143 Q8N8P6 123 aa4.92□□□□□ -1.62
GINS3-206ENST00000567143 TRAV12-2A0A075B6T6 113 aa4.92□□□□□ -1.62
GINS3-206ENST00000567143 IGHV7-4-1A0A0J9YVY3 117 aa4.92□□□□□ -1.62
GINS3-206ENST00000567143 TRBV6-1A0A0K0K1D8 114 aa4.92□□□□□ -1.62
GINS3-206ENST00000567143 SLC25A16P16260 332 aa4.92□□□□□ -1.62
GINS3-206ENST00000567143 AZU1P20160 251 aa4.92□□□□□ -1.62
GINS3-206ENST00000567143 OPRPNQ99935 248 aaPredicted RBP4.92□□□□□ -1.62
GINS3-206ENST00000567143 MRPL16Q9NX20 251 aaKnown RBP4.92□□□□□ -1.62
GINS3-206ENST00000567143 PGPEP1Q9NXJ5 209 aa4.92□□□□□ -1.62
GINS3-206ENST00000567143 CHTOPQ9Y3Y2 248 aaKnown RBP4.92□□□□□ -1.62
GINS3-206ENST00000567143 GCN1Q92616 2671 aaKnown RBP4.91□□□□□ -1.62
GINS3-206ENST00000567143 ZNF815PA8K554 130 aa4.91□□□□□ -1.62
GINS3-206ENST00000567143 IGLL5B9A064 214 aa4.91□□□□□ -1.62
GINS3-206ENST00000567143 DUSP14O95147 198 aaKnown RBP4.91□□□□□ -1.62
GINS3-206ENST00000567143 DSCR9P59020 149 aa4.91□□□□□ -1.62
GINS3-206ENST00000567143 BLCAPP62952 87 aa4.91□□□□□ -1.62
GINS3-206ENST00000567143 C12orf74Q32Q52 190 aa4.91□□□□□ -1.62
GINS3-206ENST00000567143 NRACQ8N912 160 aa4.91□□□□□ -1.62
GINS3-206ENST00000567143 DUX5Q96PT3 197 aa4.91□□□□□ -1.62
GINS3-206ENST00000567143 A0A096LNT2 108 aa4.91□□□□□ -1.62
GINS3-206ENST00000567143 LINC01559Q495D7 138 aa4.91□□□□□ -1.62
GINS3-206ENST00000567143 TMEM170BQ5T4T1 132 aa4.91□□□□□ -1.62
GINS3-206ENST00000567143 C2orf66Q6UXQ4 117 aa4.91□□□□□ -1.62
GINS3-206ENST00000567143 EEF1AKMT3Q96AZ1 226 aa4.91□□□□□ -1.62
GINS3-206ENST00000567143 PLEKHB2Q96CS7 222 aa4.91□□□□□ -1.62
GINS3-206ENST00000567143 PRADC1Q9BSG0 188 aa4.91□□□□□ -1.62
GINS3-206ENST00000567143 PDZD2O15018 2839 aa4.91□□□□□ -1.62
GINS3-206ENST00000567143 IGHV3-73A0A0B4J1V6 119 aa4.91□□□□□ -1.62
GINS3-206ENST00000567143 TRAV12-3A0A0B4J271 114 aa4.91□□□□□ -1.62
GINS3-206ENST00000567143 M0R1W7 72 aa4.91□□□□□ -1.62
GINS3-206ENST00000567143 ATP5LO75964 103 aa4.91□□□□□ -1.62
GINS3-206ENST00000567143 PSMB2P49721 201 aa4.91□□□□□ -1.62
GINS3-206ENST00000567143 SUMO2P61956 95 aaKnown RBP4.91□□□□□ -1.62
GINS3-206ENST00000567143 KRTAP21-3Q3LHN1 58 aa4.91□□□□□ -1.62
GINS3-206ENST00000567143 SAMD13Q5VXD3 122 aa4.91□□□□□ -1.62
GINS3-206ENST00000567143 MAPK1IP1LQ8NDC0 245 aa4.91□□□□□ -1.62
GINS3-206ENST00000567143 SRSF8Q9BRL6 282 aaKnown RBP4.91□□□□□ -1.62
GINS3-206ENST00000567143 SMIM2Q9BVW6 85 aa4.91□□□□□ -1.62
GINS3-206ENST00000567143 MUC4Q99102 2169 aa4.9□□□□□ -1.62
GINS3-206ENST00000567143 PRSS29PA6NIE9 313 aa4.9□□□□□ -1.62
GINS3-206ENST00000567143 LINC01549A6NIU2 74 aa4.9□□□□□ -1.62
GINS3-206ENST00000567143 PRM2P04554 102 aa4.9□□□□□ -1.62
GINS3-206ENST00000567143 ZFP2Q6ZN57 461 aa4.9□□□□□ -1.62
GINS3-206ENST00000567143 OR5A1Q8NGJ0 315 aa4.9□□□□□ -1.62
GINS3-206ENST00000567143 OR10J6PQ8NGY7 276 aa4.9□□□□□ -1.62
GINS3-206ENST00000567143 FAM110DQ8TAY7 271 aaPredicted RBP4.9□□□□□ -1.62
GINS3-206ENST00000567143 IGLV2-18A0A075B6J9 118 aa4.9□□□□□ -1.63
GINS3-206ENST00000567143 A0A087WX48 190 aa4.9□□□□□ -1.63
GINS3-206ENST00000567143 TRAV41A0A0B4J266 112 aa4.9□□□□□ -1.63
GINS3-206ENST00000567143 ADARB2-AS1A8MUL3 147 aa4.9□□□□□ -1.63
GINS3-206ENST00000567143 ZNF688P0C7X2 276 aa4.9□□□□□ -1.63
GINS3-206ENST00000567143 DEFB113Q30KQ7 82 aa4.9□□□□□ -1.63
GINS3-206ENST00000567143 C10orf99Q6UWK7 81 aa4.9□□□□□ -1.63
GINS3-206ENST00000567143 GATD1Q8NB37 220 aa4.9□□□□□ -1.63
GINS3-206ENST00000567143 RASL10AQ92737 203 aa4.9□□□□□ -1.63
GINS3-206ENST00000567143 CENPVL3A0A0U1RRI6 287 aa4.89□□□□□ -1.63
GINS3-206ENST00000567143 NDUFS8O00217 210 aa4.89□□□□□ -1.63
GINS3-206ENST00000567143 RNASE13Q5GAN3 156 aaKnown RBP4.89□□□□□ -1.63
GINS3-206ENST00000567143 Q8N6K4 173 aa4.89□□□□□ -1.63
GINS3-206ENST00000567143 NRGNQ92686 78 aa4.89□□□□□ -1.63
GINS3-206ENST00000567143 C20orf78Q9BR46 151 aa4.89□□□□□ -1.63
GINS3-206ENST00000567143 SLC50A1Q9BRV3 221 aa4.89□□□□□ -1.63
GINS3-206ENST00000567143 AKAP9Q99996 3911 aa4.89□□□□□ -1.63
GINS3-206ENST00000567143 H3BUX3 64 aa4.89□□□□□ -1.63
GINS3-206ENST00000567143 NPFFO15130 113 aa4.89□□□□□ -1.63
GINS3-206ENST00000567143 CD7P09564 240 aa4.89□□□□□ -1.63
GINS3-206ENST00000567143 IGHV4-38-2P0DP08 117 aa4.89□□□□□ -1.63
GINS3-206ENST00000567143 ASIPP42127 132 aa4.89□□□□□ -1.63
GINS3-206ENST00000567143 GAGE13Q4V321 117 aa4.89□□□□□ -1.63
GINS3-206ENST00000567143 RAX2Q96IS3 184 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms