RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 SPTAN1Q13813 2472 aaKnown RBP16.41■□□□□ 0.22
SPSB3-208ENST00000566339 USP9YO00507 2555 aaPredicted RBP16.41■□□□□ 0.22
SPSB3-208ENST00000566339 ARHGAP32A7KAX9 2087 aa16.41■□□□□ 0.22
SPSB3-208ENST00000566339 IGHV3-66A0A0C4DH42 116 aa16.41■□□□□ 0.22
SPSB3-208ENST00000566339 NDUFA4O00483 81 aa16.41■□□□□ 0.22
SPSB3-208ENST00000566339 HOXA3O43365 443 aaPredicted RBP16.41■□□□□ 0.22
SPSB3-208ENST00000566339 NXPH4O95158 308 aa16.41■□□□□ 0.22
SPSB3-208ENST00000566339 LYRM7Q5U5X0 104 aa16.41■□□□□ 0.22
SPSB3-208ENST00000566339 PRO0461Q9UI25 63 aa16.41■□□□□ 0.22
SPSB3-208ENST00000566339 H3BUA1 57 aa16.4■□□□□ 0.22
SPSB3-208ENST00000566339 SAA4P35542 130 aa16.4■□□□□ 0.22
SPSB3-208ENST00000566339 SPOCK3Q9BQ16 436 aa16.4■□□□□ 0.22
SPSB3-208ENST00000566339 SPTBN1Q01082 2364 aaKnown RBP16.39■□□□□ 0.21
SPSB3-208ENST00000566339 GAGE12HA6NDE8 117 aa16.39■□□□□ 0.21
SPSB3-208ENST00000566339 C2orf66Q6UXQ4 117 aa16.39■□□□□ 0.21
SPSB3-208ENST00000566339 BAALCQ8WXS3 180 aa16.39■□□□□ 0.21
SPSB3-208ENST00000566339 SOCS3O14543 225 aa16.38■□□□□ 0.21
SPSB3-208ENST00000566339 LGALS1P09382 135 aaKnown RBP16.38■□□□□ 0.21
SPSB3-208ENST00000566339 S100A4P26447 101 aaKnown RBP16.38■□□□□ 0.21
SPSB3-208ENST00000566339 WFDC2Q14508 124 aa16.38■□□□□ 0.21
SPSB3-208ENST00000566339 MOB4Q9Y3A3 225 aa16.38■□□□□ 0.21
SPSB3-208ENST00000566339 IGHV4OR15-8A0A075B7B6 117 aa16.38■□□□□ 0.21
SPSB3-208ENST00000566339 A0A087WW49 117 aa16.38■□□□□ 0.21
SPSB3-208ENST00000566339 TRAV41A0A0B4J266 112 aa16.38■□□□□ 0.21
SPSB3-208ENST00000566339 G3V318 75 aa16.38■□□□□ 0.21
SPSB3-208ENST00000566339 NPFFO15130 113 aa16.38■□□□□ 0.21
SPSB3-208ENST00000566339 PRR9Q5T870 116 aa16.38■□□□□ 0.21
SPSB3-208ENST00000566339 PHLDA3Q9Y5J5 127 aa16.38■□□□□ 0.21
SPSB3-208ENST00000566339 ABCA4P78363 2273 aa16.38■□□□□ 0.21
SPSB3-208ENST00000566339 HERVK_113P61574 105 aa16.36■□□□□ 0.21
SPSB3-208ENST00000566339 RNF223E7ERA6 249 aa16.36■□□□□ 0.21
SPSB3-208ENST00000566339 H3BMG7 143 aa16.36■□□□□ 0.21
SPSB3-208ENST00000566339 ARL3P36405 182 aa16.36■□□□□ 0.21
SPSB3-208ENST00000566339 UBE2D1P51668 147 aa16.36■□□□□ 0.21
SPSB3-208ENST00000566339 LCNL1Q6ZST4 164 aa16.36■□□□□ 0.21
SPSB3-208ENST00000566339 USMG5Q96IX5 58 aa16.36■□□□□ 0.21
SPSB3-208ENST00000566339 C20orf173Q96LM9 149 aa16.36■□□□□ 0.21
SPSB3-208ENST00000566339 PRADC1Q9BSG0 188 aa16.36■□□□□ 0.21
SPSB3-208ENST00000566339 PRSS29PA6NIE9 313 aa16.35■□□□□ 0.21
SPSB3-208ENST00000566339 NDUFS8O00217 210 aa16.35■□□□□ 0.21
SPSB3-208ENST00000566339 COX6B1P14854 86 aa16.35■□□□□ 0.21
SPSB3-208ENST00000566339 AZU1P20160 251 aa16.35■□□□□ 0.21
SPSB3-208ENST00000566339 MORN3Q6PF18 240 aaPredicted RBP16.35■□□□□ 0.21
SPSB3-208ENST00000566339 TMEM141Q96I45 108 aa16.35■□□□□ 0.21
SPSB3-208ENST00000566339 CYSLTR1Q9Y271 337 aa16.35■□□□□ 0.21
SPSB3-208ENST00000566339 TSSC4Q9Y5U2 329 aaPredicted RBP16.35■□□□□ 0.21
SPSB3-208ENST00000566339 SELENOKQ9Y6D0 94 aa16.35■□□□□ 0.21
SPSB3-208ENST00000566339 SCGB2A2Q13296 93 aa16.34■□□□□ 0.21
SPSB3-208ENST00000566339 DLX4Q92988 240 aaPredicted RBP16.34■□□□□ 0.21
SPSB3-208ENST00000566339 IGHV3OR16-13A0A075B7E8 117 aa16.33■□□□□ 0.21
SPSB3-208ENST00000566339 IGHV3-74A0A0B4J1X5 117 aa16.33■□□□□ 0.21
SPSB3-208ENST00000566339 SPAG8Q99932 426 aaPredicted RBP16.33■□□□□ 0.21
SPSB3-208ENST00000566339 VCX2Q9H322 139 aa16.33■□□□□ 0.21
SPSB3-208ENST00000566339 ANXA2RQ3ZCQ2 193 aa16.33■□□□□ 0.2
SPSB3-208ENST00000566339 GPHB5Q86YW7 130 aa16.33■□□□□ 0.2
SPSB3-208ENST00000566339 ZNF815PA8K554 130 aa16.32■□□□□ 0.2
SPSB3-208ENST00000566339 IGF1P05019 195 aa16.32■□□□□ 0.2
SPSB3-208ENST00000566339 LMO4P61968 165 aa16.32■□□□□ 0.2
SPSB3-208ENST00000566339 IGHV3-49A0A0A0MS15 119 aa16.31■□□□□ 0.2
SPSB3-208ENST00000566339 LINC01548A6NM66 108 aa16.31■□□□□ 0.2
SPSB3-208ENST00000566339 ETDBQ3ZM63 59 aa16.31■□□□□ 0.2
SPSB3-208ENST00000566339 C14orf178Q8N769 122 aaPredicted RBP16.31■□□□□ 0.2
SPSB3-208ENST00000566339 TIMM17AQ99595 171 aa16.31■□□□□ 0.2
SPSB3-208ENST00000566339 RPL39LQ96EH5 51 aaKnown RBP16.3■□□□□ 0.2
SPSB3-208ENST00000566339 KIF25-AS1Q9Y6Z4 181 aa16.3■□□□□ 0.2
SPSB3-208ENST00000566339 DOPEY1Q5JWR5 2465 aa16.29■□□□□ 0.2
SPSB3-208ENST00000566339 RNASE3P12724 160 aaKnown RBP16.29■□□□□ 0.2
SPSB3-208ENST00000566339 CFAP126Q5VTH2 177 aa16.29■□□□□ 0.2
SPSB3-208ENST00000566339 PGPEP1Q9NXJ5 209 aa16.29■□□□□ 0.2
SPSB3-208ENST00000566339 CRYBG3Q68DQ2 2970 aa16.29■□□□□ 0.2
SPSB3-208ENST00000566339 A0A1B0GV72 72 aa16.28■□□□□ 0.2
SPSB3-208ENST00000566339 VCYO14598 125 aa16.28■□□□□ 0.2
SPSB3-208ENST00000566339 MGPP08493 103 aa16.28■□□□□ 0.2
SPSB3-208ENST00000566339 UBE2D3P61077 147 aa16.28■□□□□ 0.2
SPSB3-208ENST00000566339 UBE2D2P62837 147 aa16.28■□□□□ 0.2
SPSB3-208ENST00000566339 PMVKQ15126 192 aa16.28■□□□□ 0.2
SPSB3-208ENST00000566339 SCGB1D4Q6XE38 83 aa16.28■□□□□ 0.2
SPSB3-208ENST00000566339 Q6ZQT7 251 aa16.28■□□□□ 0.2
SPSB3-208ENST00000566339 C1QTNF4Q9BXJ3 329 aa16.28■□□□□ 0.2
SPSB3-208ENST00000566339 MRPL16Q9NX20 251 aaKnown RBP16.28■□□□□ 0.2
SPSB3-208ENST00000566339 CENPEQ02224 2701 aa16.28■□□□□ 0.2
SPSB3-208ENST00000566339 TRBV20-1A0A075B6N2 111 aa16.28■□□□□ 0.2
SPSB3-208ENST00000566339 TRBV6-5A0A0K0K1A5 114 aa16.28■□□□□ 0.2
SPSB3-208ENST00000566339 A0A1W2PPR1 153 aa16.28■□□□□ 0.2
SPSB3-208ENST00000566339 C11orf86A6NJI1 115 aa16.28■□□□□ 0.2
SPSB3-208ENST00000566339 POLR2KP53803 58 aaKnown RBP16.28■□□□□ 0.2
SPSB3-208ENST00000566339 GTSF1LQ9H1H1 148 aa16.28■□□□□ 0.2
SPSB3-208ENST00000566339 KLK15Q9H2R5 256 aa16.28■□□□□ 0.2
SPSB3-208ENST00000566339 IGIPA6NJ69 53 aa16.27■□□□□ 0.2
SPSB3-208ENST00000566339 TCTEX1D4Q5JR98 221 aa16.27■□□□□ 0.2
SPSB3-208ENST00000566339 KLLNB2CW77 178 aa16.26■□□□□ 0.19
SPSB3-208ENST00000566339 CRYGDP07320 174 aa16.26■□□□□ 0.19
SPSB3-208ENST00000566339 LINC00315P59091 139 aa16.26■□□□□ 0.19
SPSB3-208ENST00000566339 SRSF9Q13242 221 aaKnown RBP eCLIP16.26■□□□□ 0.19
SPSB3-208ENST00000566339 AMTNQ6UX39 209 aa16.26■□□□□ 0.19
SPSB3-208ENST00000566339 SH2D6Q7Z4S9 175 aa16.26■□□□□ 0.19
SPSB3-208ENST00000566339 HRNRQ86YZ3 2850 aaPredicted RBP16.26■□□□□ 0.19
SPSB3-208ENST00000566339 CYSRT1A8MQ03 144 aa16.26■□□□□ 0.19
SPSB3-208ENST00000566339 APOMO95445 188 aa16.26■□□□□ 0.19
SPSB3-208ENST00000566339 CD7P09564 240 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms