RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 COX19Q49B96 90 aa13.62□□□□□ -0.23
COMMD4-213ENST00000565834 SCRT2Q9NQ03 307 aa13.62□□□□□ -0.23
COMMD4-213ENST00000565834 MDFICQ9P1T7 246 aa13.62□□□□□ -0.23
COMMD4-213ENST00000565834 PHLDA3Q9Y5J5 127 aa13.62□□□□□ -0.23
COMMD4-213ENST00000565834 A0A1B0GW15 77 aa13.61□□□□□ -0.23
COMMD4-213ENST00000565834 A8MZ25 164 aa13.61□□□□□ -0.23
COMMD4-213ENST00000565834 PRM2P04554 102 aa13.61□□□□□ -0.23
COMMD4-213ENST00000565834 RAB4BP61018 213 aa13.61□□□□□ -0.23
COMMD4-213ENST00000565834 CACNG7P62955 275 aa13.61□□□□□ -0.23
COMMD4-213ENST00000565834 WDR73Q6P4I2 378 aa13.61□□□□□ -0.23
COMMD4-213ENST00000565834 C9orf85Q96MD7 179 aa13.61□□□□□ -0.23
COMMD4-213ENST00000565834 MUC4Q99102 2169 aa13.61□□□□□ -0.23
COMMD4-213ENST00000565834 S100A8P05109 93 aa13.6□□□□□ -0.23
COMMD4-213ENST00000565834 S100A6P06703 90 aa13.6□□□□□ -0.23
COMMD4-213ENST00000565834 NTF3P20783 257 aa13.6□□□□□ -0.23
COMMD4-213ENST00000565834 TWIST1Q15672 202 aa13.6□□□□□ -0.23
COMMD4-213ENST00000565834 KPRPQ5T749 579 aaPredicted RBP13.6□□□□□ -0.23
COMMD4-213ENST00000565834 SPANXN1Q5VSR9 72 aa13.6□□□□□ -0.23
COMMD4-213ENST00000565834 ZNF705AQ6ZN79 300 aaPredicted RBP13.6□□□□□ -0.23
COMMD4-213ENST00000565834 GNB1LQ9BYB4 327 aa13.6□□□□□ -0.23
COMMD4-213ENST00000565834 SNURFLB1AK76 121 aa13.59□□□□□ -0.23
COMMD4-213ENST00000565834 ZNF415Q09FC8 603 aa13.59□□□□□ -0.23
COMMD4-213ENST00000565834 UBE2CO00762 179 aa13.59□□□□□ -0.23
COMMD4-213ENST00000565834 SPRY2O43597 315 aa13.59□□□□□ -0.23
COMMD4-213ENST00000565834 TMEM136Q6ZRR5 245 aa13.59□□□□□ -0.23
COMMD4-213ENST00000565834 IGHV4-4A0A075B6R2 117 aa13.58□□□□□ -0.24
COMMD4-213ENST00000565834 M0R381 172 aa13.58□□□□□ -0.24
COMMD4-213ENST00000565834 HLA-DQA1P01909 254 aa13.58□□□□□ -0.24
COMMD4-213ENST00000565834 MT-ND6P03923 174 aa13.58□□□□□ -0.24
COMMD4-213ENST00000565834 MSRB1Q9NZV6 116 aa13.58□□□□□ -0.24
COMMD4-213ENST00000565834 TRAPPC1Q9Y5R8 145 aa13.58□□□□□ -0.24
COMMD4-213ENST00000565834 AZU1P20160 251 aa13.57□□□□□ -0.24
COMMD4-213ENST00000565834 LINC00518Q8N0U6 118 aa13.57□□□□□ -0.24
COMMD4-213ENST00000565834 ZFP82Q8N141 532 aa13.57□□□□□ -0.24
COMMD4-213ENST00000565834 C11orf72Q8NBR9 251 aa13.57□□□□□ -0.24
COMMD4-213ENST00000565834 FRZBQ92765 325 aa13.57□□□□□ -0.24
COMMD4-213ENST00000565834 GSN-AS1Q9NRJ2 163 aa13.57□□□□□ -0.24
COMMD4-213ENST00000565834 TRGC2P03986 189 aa13.56□□□□□ -0.24
COMMD4-213ENST00000565834 RRN3P1Q2M238 152 aa13.56□□□□□ -0.24
COMMD4-213ENST00000565834 DEFB135Q30KP9 77 aa13.56□□□□□ -0.24
COMMD4-213ENST00000565834 TMEM263Q8WUH6 116 aaKnown RBP13.56□□□□□ -0.24
COMMD4-213ENST00000565834 NXPH4O95158 308 aa13.56□□□□□ -0.24
COMMD4-213ENST00000565834 RNASE8Q8TDE3 154 aaKnown RBP13.56□□□□□ -0.24
COMMD4-213ENST00000565834 RCHY1Q96PM5 261 aa13.56□□□□□ -0.24
COMMD4-213ENST00000565834 MRPL18Q9H0U6 180 aaKnown RBP13.56□□□□□ -0.24
COMMD4-213ENST00000565834 PRB2P02812 416 aaPredicted RBP13.55□□□□□ -0.24
COMMD4-213ENST00000565834 FABP9Q0Z7S8 132 aa13.55□□□□□ -0.24
COMMD4-213ENST00000565834 GATD1Q8NB37 220 aa13.55□□□□□ -0.24
COMMD4-213ENST00000565834 SYT8Q8NBV8 401 aa13.55□□□□□ -0.24
COMMD4-213ENST00000565834 C16orf74Q96GX8 76 aa13.55□□□□□ -0.24
COMMD4-213ENST00000565834 DMRTA1Q5VZB9 504 aa13.54□□□□□ -0.24
COMMD4-213ENST00000565834 ZNF493Q6ZR52 646 aa13.54□□□□□ -0.24
COMMD4-213ENST00000565834 Q6ZWC4 215 aa13.54□□□□□ -0.24
COMMD4-213ENST00000565834 SPXQ9BT56 116 aa13.54□□□□□ -0.24
COMMD4-213ENST00000565834 C5orf52A6NGY3 159 aa13.53□□□□□ -0.24
COMMD4-213ENST00000565834 TRGC1P0CF51 173 aa13.53□□□□□ -0.24
COMMD4-213ENST00000565834 SMIM15Q7Z3B0 74 aa13.53□□□□□ -0.24
COMMD4-213ENST00000565834 NBEAL2Q6ZNJ1 2754 aa13.53□□□□□ -0.24
COMMD4-213ENST00000565834 M0R2P5 195 aa13.53□□□□□ -0.24
COMMD4-213ENST00000565834 APCSP02743 223 aa13.53□□□□□ -0.24
COMMD4-213ENST00000565834 TMEM191AQ9H0A3 160 aa13.53□□□□□ -0.24
COMMD4-213ENST00000565834 SMIM9A6NGZ8 99 aa13.52□□□□□ -0.25
COMMD4-213ENST00000565834 AKR1D1P51857 326 aa13.52□□□□□ -0.25
COMMD4-213ENST00000565834 SLAQ13239 276 aa13.52□□□□□ -0.25
COMMD4-213ENST00000565834 ZNF876PQ49A33 203 aa13.52□□□□□ -0.25
COMMD4-213ENST00000565834 AP1S3Q96PC3 154 aa13.52□□□□□ -0.25
COMMD4-213ENST00000565834 X6R8D5 127 aa13.52□□□□□ -0.25
COMMD4-213ENST00000565834 K7EIL1 84 aa13.51□□□□□ -0.25
COMMD4-213ENST00000565834 EVI2AP22794 236 aa13.51□□□□□ -0.25
COMMD4-213ENST00000565834 IL17DQ8TAD2 202 aa13.51□□□□□ -0.25
COMMD4-213ENST00000565834 RNF183Q96D59 192 aa13.51□□□□□ -0.25
COMMD4-213ENST00000565834 PHOX2AO14813 284 aa13.5□□□□□ -0.25
COMMD4-213ENST00000565834 OR11H2Q8NH07 326 aa13.5□□□□□ -0.25
COMMD4-213ENST00000565834 PTH2Q96A98 100 aa13.5□□□□□ -0.25
COMMD4-213ENST00000565834 FAM104BQ5XKR9 115 aa13.5□□□□□ -0.25
COMMD4-213ENST00000565834 AMN1Q8IY45 258 aa13.5□□□□□ -0.25
COMMD4-213ENST00000565834 PLAC8L1A1L4L8 177 aa13.49□□□□□ -0.25
COMMD4-213ENST00000565834 SNRPEP62304 92 aaKnown RBP13.49□□□□□ -0.25
COMMD4-213ENST00000565834 KIAA1644Q3SXP7 199 aa13.49□□□□□ -0.25
COMMD4-213ENST00000565834 PIK3CD-AS1Q5SR53 167 aa13.49□□□□□ -0.25
COMMD4-213ENST00000565834 SMIM6P0DI80 62 aa13.48□□□□□ -0.25
COMMD4-213ENST00000565834 DAZ2Q13117 558 aaKnown RBP13.48□□□□□ -0.25
COMMD4-213ENST00000565834 C14orf178Q8N769 122 aaPredicted RBP13.48□□□□□ -0.25
COMMD4-213ENST00000565834 DPH3P1Q9H4G8 78 aa13.48□□□□□ -0.25
COMMD4-213ENST00000565834 JPT2Q9H910 190 aa13.48□□□□□ -0.25
COMMD4-213ENST00000565834 MRPL16Q9NX20 251 aaKnown RBP13.48□□□□□ -0.25
COMMD4-213ENST00000565834 SMIM17P0DL12 118 aa13.47□□□□□ -0.25
COMMD4-213ENST00000565834 S100A12P80511 92 aa13.47□□□□□ -0.25
COMMD4-213ENST00000565834 NOP10Q9NPE3 64 aaKnown RBP13.47□□□□□ -0.25
COMMD4-213ENST00000565834 TRGV1A0A0A0MS02 117 aa13.47□□□□□ -0.25
COMMD4-213ENST00000565834 DEFB121Q5J5C9 76 aa13.47□□□□□ -0.25
COMMD4-213ENST00000565834 RASL10AQ92737 203 aa13.47□□□□□ -0.25
COMMD4-213ENST00000565834 TP53TG1Q9Y2A0 90 aa13.47□□□□□ -0.25
COMMD4-213ENST00000565834 MIFP14174 115 aa13.46□□□□□ -0.26
COMMD4-213ENST00000565834 RAB4AP20338 218 aa13.46□□□□□ -0.26
COMMD4-213ENST00000565834 EMP1P54849 157 aa13.46□□□□□ -0.26
COMMD4-213ENST00000565834 LGALS9BQ3B8N2 356 aa13.46□□□□□ -0.26
COMMD4-213ENST00000565834 RNF185Q96GF1 192 aa13.46□□□□□ -0.26
COMMD4-213ENST00000565834 NDUFAF3Q9BU61 184 aa13.46□□□□□ -0.26
COMMD4-213ENST00000565834 A0A087WWL8 130 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms