RNA–Protein interactions for RNA: ENST00000565666.5

CMTM3-210, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-210ENST00000565666 Q9H8V8 135 aa12.94□□□□□ -0.34
CMTM3-210ENST00000565666 MRPS16Q9Y3D3 137 aaKnown RBP12.94□□□□□ -0.34
CMTM3-210ENST00000565666 KMT2AQ03164 3969 aa12.94□□□□□ -0.34
CMTM3-210ENST00000565666 NBDYA0A0U1RRE5 68 aa12.93□□□□□ -0.34
CMTM3-210ENST00000565666 RS1O15537 224 aa12.93□□□□□ -0.34
CMTM3-210ENST00000565666 GYPEP15421 78 aa12.93□□□□□ -0.34
CMTM3-210ENST00000565666 SRIP30626 198 aa12.93□□□□□ -0.34
CMTM3-210ENST00000565666 RPL35P42766 123 aaKnown RBP12.93□□□□□ -0.34
CMTM3-210ENST00000565666 MEF2BQ02080 365 aaPredicted RBP12.93□□□□□ -0.34
CMTM3-210ENST00000565666 LINC01559Q495D7 138 aa12.93□□□□□ -0.34
CMTM3-210ENST00000565666 CFAP126Q5VTH2 177 aa12.93□□□□□ -0.34
CMTM3-210ENST00000565666 C11orf52Q96A22 123 aa12.93□□□□□ -0.34
CMTM3-210ENST00000565666 IL36BQ9NZH7 164 aa12.93□□□□□ -0.34
CMTM3-210ENST00000565666 K7EQD1 137 aa12.92□□□□□ -0.34
CMTM3-210ENST00000565666 CIDEAO60543 219 aa12.92□□□□□ -0.34
CMTM3-210ENST00000565666 ARMS2P0C7Q2 107 aa12.92□□□□□ -0.34
CMTM3-210ENST00000565666 SOHLH1Q5JUK2 328 aa12.92□□□□□ -0.34
CMTM3-210ENST00000565666 DNLZQ5SXM8 178 aa12.92□□□□□ -0.34
CMTM3-210ENST00000565666 PRR27Q6MZM9 219 aa12.92□□□□□ -0.34
CMTM3-210ENST00000565666 LINC00336Q6ZUF6 198 aa12.92□□□□□ -0.34
CMTM3-210ENST00000565666 NEGR1Q7Z3B1 354 aa12.92□□□□□ -0.34
CMTM3-210ENST00000565666 UPK3BQ9BT76 320 aa12.92□□□□□ -0.34
CMTM3-210ENST00000565666 IGHV3-73A0A0B4J1V6 119 aa12.91□□□□□ -0.34
CMTM3-210ENST00000565666 PDE6DO43924 150 aa12.91□□□□□ -0.34
CMTM3-210ENST00000565666 BCL2P10415 239 aa12.91□□□□□ -0.34
CMTM3-210ENST00000565666 GATA1P15976 413 aaPredicted RBP12.91□□□□□ -0.34
CMTM3-210ENST00000565666 BLOC1S1P78537 153 aa12.91□□□□□ -0.34
CMTM3-210ENST00000565666 C1orf134Q5TEV5 83 aa12.91□□□□□ -0.34
CMTM3-210ENST00000565666 SYT8Q8NBV8 401 aa12.91□□□□□ -0.34
CMTM3-210ENST00000565666 DERL1Q9BUN8 251 aa12.91□□□□□ -0.34
CMTM3-210ENST00000565666 A8MWV9 139 aa12.9□□□□□ -0.34
CMTM3-210ENST00000565666 TAGLN2P37802 199 aaKnown RBP12.9□□□□□ -0.34
CMTM3-210ENST00000565666 MLST8Q9BVC4 326 aa12.9□□□□□ -0.34
CMTM3-210ENST00000565666 VAX2Q9UIW0 290 aa12.9□□□□□ -0.34
CMTM3-210ENST00000565666 PHLDA3Q9Y5J5 127 aa12.9□□□□□ -0.34
CMTM3-210ENST00000565666 DNAH6Q9C0G6 4158 aa12.89□□□□□ -0.35
CMTM3-210ENST00000565666 LOC100131303A0A0U1RQF7 123 aa12.89□□□□□ -0.35
CMTM3-210ENST00000565666 RTL8CO15255 209 aa12.89□□□□□ -0.35
CMTM3-210ENST00000565666 CENPWQ5EE01 88 aa12.89□□□□□ -0.35
CMTM3-210ENST00000565666 PIK3CD-AS1Q5SR53 167 aa12.89□□□□□ -0.35
CMTM3-210ENST00000565666 LYPD5Q6UWN5 251 aa12.89□□□□□ -0.35
CMTM3-210ENST00000565666 PRADC1Q9BSG0 188 aa12.89□□□□□ -0.35
CMTM3-210ENST00000565666 MED9Q9NWA0 146 aa12.89□□□□□ -0.35
CMTM3-210ENST00000565666 BOLA1Q9Y3E2 137 aa12.89□□□□□ -0.35
CMTM3-210ENST00000565666 PRSS29PA6NIE9 313 aa12.88□□□□□ -0.35
CMTM3-210ENST00000565666 MGST1P10620 155 aaKnown RBP12.88□□□□□ -0.35
CMTM3-210ENST00000565666 RPL19P84098 196 aaKnown RBP12.88□□□□□ -0.35
CMTM3-210ENST00000565666 RHOHQ15669 191 aa12.88□□□□□ -0.35
CMTM3-210ENST00000565666 TTC32Q5I0X7 151 aa12.88□□□□□ -0.35
CMTM3-210ENST00000565666 SLC25A29Q8N8R3 303 aa12.88□□□□□ -0.35
CMTM3-210ENST00000565666 PARLQ9H300 379 aa12.88□□□□□ -0.35
CMTM3-210ENST00000565666 TRBV6-4A0A1B0GX49 114 aa12.87□□□□□ -0.35
CMTM3-210ENST00000565666 NXPH4O95158 308 aa12.87□□□□□ -0.35
CMTM3-210ENST00000565666 GNG4P50150 75 aa12.87□□□□□ -0.35
CMTM3-210ENST00000565666 DMRTA1Q5VZB9 504 aa12.87□□□□□ -0.35
CMTM3-210ENST00000565666 RAB19A4D1S5 217 aa12.86□□□□□ -0.35
CMTM3-210ENST00000565666 M0R381 172 aa12.86□□□□□ -0.35
CMTM3-210ENST00000565666 SIVA1O15304 175 aa12.86□□□□□ -0.35
CMTM3-210ENST00000565666 ZFP2Q6ZN57 461 aa12.86□□□□□ -0.35
CMTM3-210ENST00000565666 SH2D6Q7Z4S9 175 aa12.86□□□□□ -0.35
CMTM3-210ENST00000565666 ZFP82Q8N141 532 aa12.86□□□□□ -0.35
CMTM3-210ENST00000565666 JPT2Q9H910 190 aa12.86□□□□□ -0.35
CMTM3-210ENST00000565666 ZNF575Q86XF7 245 aa12.85□□□□□ -0.35
CMTM3-210ENST00000565666 C6orf223Q8N319 242 aa12.85□□□□□ -0.35
CMTM3-210ENST00000565666 DAZAP1Q96EP5 407 aaKnown RBP12.85□□□□□ -0.35
CMTM3-210ENST00000565666 SCRT2Q9NQ03 307 aa12.85□□□□□ -0.35
CMTM3-210ENST00000565666 CXCL1P09341 107 aa12.84□□□□□ -0.35
CMTM3-210ENST00000565666 MED14OSP0DP75 135 aa12.84□□□□□ -0.35
CMTM3-210ENST00000565666 FAM74A4Q5TZK3 123 aa12.84□□□□□ -0.35
CMTM3-210ENST00000565666 SMIM12Q96EX1 92 aa12.84□□□□□ -0.35
CMTM3-210ENST00000565666 A0A1W2PPQ1 181 aa12.83□□□□□ -0.36
CMTM3-210ENST00000565666 RHODO00212 210 aa12.83□□□□□ -0.36
CMTM3-210ENST00000565666 SAMD10Q9BYL1 202 aa12.83□□□□□ -0.36
CMTM3-210ENST00000565666 RBFOX3A6NFN3 312 aa12.82□□□□□ -0.36
CMTM3-210ENST00000565666 IGLV2-8P01709 118 aa12.82□□□□□ -0.36
CMTM3-210ENST00000565666 SFRP2Q96HF1 295 aa12.82□□□□□ -0.36
CMTM3-210ENST00000565666 KRTAP1-5Q9BYS1 174 aa12.82□□□□□ -0.36
CMTM3-210ENST00000565666 BIN3Q9NQY0 253 aa12.82□□□□□ -0.36
CMTM3-210ENST00000565666 EPPK1P58107 5090 aaKnown RBP12.82□□□□□ -0.36
CMTM3-210ENST00000565666 A0A087WWL8 130 aa12.81□□□□□ -0.36
CMTM3-210ENST00000565666 Q6ZSN1 163 aa12.81□□□□□ -0.36
CMTM3-210ENST00000565666 OR10AG1Q8NH19 301 aa12.81□□□□□ -0.36
CMTM3-210ENST00000565666 TRBV20OR9-2A0A075B6H5 130 aa12.8□□□□□ -0.36
CMTM3-210ENST00000565666 SPANXN1Q5VSR9 72 aa12.8□□□□□ -0.36
CMTM3-210ENST00000565666 UFSP1Q6NVU6 142 aa12.8□□□□□ -0.36
CMTM3-210ENST00000565666 WFDC10BQ8IUB3 73 aa12.8□□□□□ -0.36
CMTM3-210ENST00000565666 OR2D3Q8NGH3 330 aa12.8□□□□□ -0.36
CMTM3-210ENST00000565666 LYPD6BQ8NI32 183 aa12.8□□□□□ -0.36
CMTM3-210ENST00000565666 DNAH10Q8IVF4 4471 aa12.8□□□□□ -0.36
CMTM3-210ENST00000565666 GAGE12JA6NER3 117 aa12.79□□□□□ -0.36
CMTM3-210ENST00000565666 SNAI2O43623 268 aa12.79□□□□□ -0.36
CMTM3-210ENST00000565666 P01737 135 aa12.79□□□□□ -0.36
CMTM3-210ENST00000565666 OR5AL1P0C617 328 aa12.79□□□□□ -0.36
CMTM3-210ENST00000565666 RPS20P60866 119 aaKnown RBP12.79□□□□□ -0.36
CMTM3-210ENST00000565666 GAGE1Q13065 139 aa12.79□□□□□ -0.36
CMTM3-210ENST00000565666 GAGE4Q13068 117 aa12.79□□□□□ -0.36
CMTM3-210ENST00000565666 GAGE5Q13069 117 aa12.79□□□□□ -0.36
CMTM3-210ENST00000565666 GAGE13Q4V321 117 aa12.79□□□□□ -0.36
CMTM3-210ENST00000565666 TOR2AQ5JU69 321 aa12.79□□□□□ -0.36
CMTM3-210ENST00000565666 ATP6V0E2Q8NHE4 81 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms