RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 BIRC6Q9NR09 4857 aa9.4□□□□□ -0.9
SPG7-209ENST00000564047 A0A1B0GXF2 115 aa9.4□□□□□ -0.9
SPG7-209ENST00000564047 P01737 135 aa9.4□□□□□ -0.9
SPG7-209ENST00000564047 FRMD6-AS1P0C7T7 363 aa9.4□□□□□ -0.9
SPG7-209ENST00000564047 RBMY1A1P0DJD3 496 aaKnown RBP9.4□□□□□ -0.9
SPG7-209ENST00000564047 RBMY1CP0DJD4 496 aa9.4□□□□□ -0.9
SPG7-209ENST00000564047 RBMY1FQ15415 496 aaKnown RBP9.4□□□□□ -0.9
SPG7-209ENST00000564047 LINC01559Q495D7 138 aa9.4□□□□□ -0.9
SPG7-209ENST00000564047 Q6ZQT7 251 aa9.4□□□□□ -0.9
SPG7-209ENST00000564047 TMEM256Q8N2U0 113 aa9.4□□□□□ -0.9
SPG7-209ENST00000564047 NUP35Q8NFH5 326 aa9.4□□□□□ -0.9
SPG7-209ENST00000564047 NEU1Q99519 415 aa9.4□□□□□ -0.9
SPG7-209ENST00000564047 GOLT1BQ9Y3E0 138 aa9.4□□□□□ -0.9
SPG7-209ENST00000564047 APCSP02743 223 aa9.39□□□□□ -0.91
SPG7-209ENST00000564047 ORM1P02763 201 aa9.39□□□□□ -0.91
SPG7-209ENST00000564047 MRPL54Q6P161 138 aaKnown RBP9.39□□□□□ -0.91
SPG7-209ENST00000564047 FAM159AQ6UWV7 190 aa9.39□□□□□ -0.91
SPG7-209ENST00000564047 C1orf158Q8N1D5 194 aa9.39□□□□□ -0.91
SPG7-209ENST00000564047 KCNS1Q96KK3 526 aa9.39□□□□□ -0.91
SPG7-209ENST00000564047 LINC00467Q9BRT7 94 aa9.39□□□□□ -0.91
SPG7-209ENST00000564047 C11orf21Q9P2W6 132 aa9.39□□□□□ -0.91
SPG7-209ENST00000564047 TP53TG3Q9ULZ0 132 aa9.39□□□□□ -0.91
SPG7-209ENST00000564047 AGRNO00468 2067 aa9.39□□□□□ -0.91
SPG7-209ENST00000564047 IGHV1OR15-1A0A075B7D0 117 aa9.38□□□□□ -0.91
SPG7-209ENST00000564047 IGKV3D-20A0A0C4DH25 116 aa9.38□□□□□ -0.91
SPG7-209ENST00000564047 TMEM189A5PLL7 270 aa9.38□□□□□ -0.91
SPG7-209ENST00000564047 GZMBP10144 247 aa9.38□□□□□ -0.91
SPG7-209ENST00000564047 RPS20P60866 119 aaKnown RBP9.38□□□□□ -0.91
SPG7-209ENST00000564047 TDRG1Q3Y452 100 aa9.38□□□□□ -0.91
SPG7-209ENST00000564047 ANXA2RQ3ZCQ2 193 aa9.38□□□□□ -0.91
SPG7-209ENST00000564047 MUC21Q5SSG8 566 aa9.38□□□□□ -0.91
SPG7-209ENST00000564047 Q6ZWC4 215 aa9.38□□□□□ -0.91
SPG7-209ENST00000564047 OR2D3Q8NGH3 330 aa9.38□□□□□ -0.91
SPG7-209ENST00000564047 LINC01587Q99440 93 aa9.38□□□□□ -0.91
SPG7-209ENST00000564047 TMEM208Q9BTX3 173 aa9.38□□□□□ -0.91
SPG7-209ENST00000564047 NAGKQ9UJ70 344 aa9.38□□□□□ -0.91
SPG7-209ENST00000564047 GRIFINA4D1Z8 144 aa9.37□□□□□ -0.91
SPG7-209ENST00000564047 HIGD1CA8MV81 97 aa9.37□□□□□ -0.91
SPG7-209ENST00000564047 FOXA3P55318 350 aaPredicted RBP9.37□□□□□ -0.91
SPG7-209ENST00000564047 LINC00310P59036 64 aa9.37□□□□□ -0.91
SPG7-209ENST00000564047 PKIAP61925 76 aa9.37□□□□□ -0.91
SPG7-209ENST00000564047 HBBP68871 147 aa9.37□□□□□ -0.91
SPG7-209ENST00000564047 CTAG1AP78358 180 aa9.37□□□□□ -0.91
SPG7-209ENST00000564047 IQCJQ1A5X6 159 aa9.37□□□□□ -0.91
SPG7-209ENST00000564047 DEFB121Q5J5C9 76 aa9.37□□□□□ -0.91
SPG7-209ENST00000564047 ZNF705AQ6ZN79 300 aaPredicted RBP9.37□□□□□ -0.91
SPG7-209ENST00000564047 BAGE3Q86Y29 109 aa9.37□□□□□ -0.91
SPG7-209ENST00000564047 WWC2-AS2Q96NR7 200 aa9.37□□□□□ -0.91
SPG7-209ENST00000564047 LINC00587B1AMM8 73 aa9.36□□□□□ -0.91
SPG7-209ENST00000564047 SPINK4O60575 86 aa9.36□□□□□ -0.91
SPG7-209ENST00000564047 SERF1AO75920 110 aa9.36□□□□□ -0.91
SPG7-209ENST00000564047 RAB4BP61018 213 aa9.36□□□□□ -0.91
SPG7-209ENST00000564047 TRGV11A0A075B6L2 103 aa9.35□□□□□ -0.91
SPG7-209ENST00000564047 IGHV3OR16-12A0A075B7B8 117 aa9.35□□□□□ -0.91
SPG7-209ENST00000564047 TMSB15BA0A087X1C1 80 aa9.35□□□□□ -0.91
SPG7-209ENST00000564047 A0A1B0GW15 77 aa9.35□□□□□ -0.91
SPG7-209ENST00000564047 NUPR1O60356 82 aa9.35□□□□□ -0.91
SPG7-209ENST00000564047 SRIP30626 198 aa9.35□□□□□ -0.91
SPG7-209ENST00000564047 DEFB135Q30KP9 77 aa9.35□□□□□ -0.91
SPG7-209ENST00000564047 CDPF1Q6NVV7 123 aa9.35□□□□□ -0.91
SPG7-209ENST00000564047 ZNF575Q86XF7 245 aa9.35□□□□□ -0.91
SPG7-209ENST00000564047 GATD1Q8NB37 220 aa9.35□□□□□ -0.91
SPG7-209ENST00000564047 RNF183Q96D59 192 aa9.35□□□□□ -0.91
SPG7-209ENST00000564047 RCHY1Q96PM5 261 aa9.35□□□□□ -0.91
SPG7-209ENST00000564047 TP53TG1Q9Y2A0 90 aa9.35□□□□□ -0.91
SPG7-209ENST00000564047 SACSQ9NZJ4 4579 aa9.34□□□□□ -0.91
SPG7-209ENST00000564047 RYR2Q92736 4967 aa9.34□□□□□ -0.91
SPG7-209ENST00000564047 CBY3A6NI87 242 aa9.34□□□□□ -0.91
SPG7-209ENST00000564047 TSTD3H0UI37 97 aa9.34□□□□□ -0.91
SPG7-209ENST00000564047 GNRH2O43555 120 aa9.34□□□□□ -0.91
SPG7-209ENST00000564047 DMRTA1Q5VZB9 504 aa9.34□□□□□ -0.91
SPG7-209ENST00000564047 GTSF1Q8WW33 167 aa9.34□□□□□ -0.91
SPG7-209ENST00000564047 DYNC2H1Q8NCM8 4307 aaKnown RBP9.33□□□□□ -0.92
SPG7-209ENST00000564047 SMIM9A6NGZ8 99 aa9.33□□□□□ -0.92
SPG7-209ENST00000564047 SPRY2O43597 315 aa9.33□□□□□ -0.92
SPG7-209ENST00000564047 HTN1P15515 57 aa9.33□□□□□ -0.92
SPG7-209ENST00000564047 ASIPP42127 132 aa9.33□□□□□ -0.92
SPG7-209ENST00000564047 SLAQ13239 276 aa9.33□□□□□ -0.92
SPG7-209ENST00000564047 RRN3P1Q2M238 152 aa9.33□□□□□ -0.92
SPG7-209ENST00000564047 X6R8D5 127 aa9.33□□□□□ -0.92
SPG7-209ENST00000564047 IGHV3-16A0A0C4DH30 117 aa9.32□□□□□ -0.92
SPG7-209ENST00000564047 IGLC6P0CF74 106 aa9.32□□□□□ -0.92
SPG7-209ENST00000564047 MED14OSP0DP75 135 aa9.32□□□□□ -0.92
SPG7-209ENST00000564047 S100A4P26447 101 aaKnown RBP9.32□□□□□ -0.92
SPG7-209ENST00000564047 RIGQ13278 110 aa9.32□□□□□ -0.92
SPG7-209ENST00000564047 KIAA1644Q3SXP7 199 aa9.32□□□□□ -0.92
SPG7-209ENST00000564047 ZNF493Q6ZR52 646 aa9.32□□□□□ -0.92
SPG7-209ENST00000564047 SBSPONQ8IVN8 264 aa9.32□□□□□ -0.92
SPG7-209ENST00000564047 C18orf32Q8TCD1 76 aa9.32□□□□□ -0.92
SPG7-209ENST00000564047 TMEM263Q8WUH6 116 aaKnown RBP9.32□□□□□ -0.92
SPG7-209ENST00000564047 ALKBH7Q9BT30 221 aaPredicted RBP9.32□□□□□ -0.92
SPG7-209ENST00000564047 SAMD10Q9BYL1 202 aa9.32□□□□□ -0.92
SPG7-209ENST00000564047 F2Z2F3 143 aa9.31□□□□□ -0.92
SPG7-209ENST00000564047 PRM2P04554 102 aa9.31□□□□□ -0.92
SPG7-209ENST00000564047 ARMS2P0C7Q2 107 aa9.31□□□□□ -0.92
SPG7-209ENST00000564047 RNASE3P12724 160 aaKnown RBP9.31□□□□□ -0.92
SPG7-209ENST00000564047 AZU1P20160 251 aa9.31□□□□□ -0.92
SPG7-209ENST00000564047 ZNF415Q09FC8 603 aa9.31□□□□□ -0.92
SPG7-209ENST00000564047 FER1L6-AS1Q8NA97 138 aa9.31□□□□□ -0.92
SPG7-209ENST00000564047 OR11H2Q8NH07 326 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 193.5 ms