RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 M0R381 172 aa16■□□□□ 0.15
LINC01960-201ENST00000563759 APCSP02743 223 aa16■□□□□ 0.15
LINC01960-201ENST00000563759 SLAQ13239 276 aa16■□□□□ 0.15
LINC01960-201ENST00000563759 C1orf158Q8N1D5 194 aa16■□□□□ 0.15
LINC01960-201ENST00000563759 CSTL1Q9H114 145 aa16■□□□□ 0.15
LINC01960-201ENST00000563759 MSRB1Q9NZV6 116 aa16■□□□□ 0.15
LINC01960-201ENST00000563759 GOLT1BQ9Y3E0 138 aa16■□□□□ 0.15
LINC01960-201ENST00000563759 LOC102724200A0A096LPH7 203 aaPredicted RBP15.99■□□□□ 0.15
LINC01960-201ENST00000563759 LOC105371267A0A1B0GV96 52 aa15.99■□□□□ 0.15
LINC01960-201ENST00000563759 G3V4G9 280 aa15.99■□□□□ 0.15
LINC01960-201ENST00000563759 PHOX2AO14813 284 aa15.99■□□□□ 0.15
LINC01960-201ENST00000563759 KRTAP10-11P60412 298 aa15.99■□□□□ 0.15
LINC01960-201ENST00000563759 SCRT2Q9NQ03 307 aa15.99■□□□□ 0.15
LINC01960-201ENST00000563759 SPRY2O43597 315 aa15.99■□□□□ 0.15
LINC01960-201ENST00000563759 LINC00467Q9BRT7 94 aa15.99■□□□□ 0.15
LINC01960-201ENST00000563759 TRGC1P0CF51 173 aa15.98■□□□□ 0.15
LINC01960-201ENST00000563759 C9orf85Q96MD7 179 aa15.97■□□□□ 0.15
LINC01960-201ENST00000563759 IGHV4-4A0A075B6R2 117 aa15.97■□□□□ 0.15
LINC01960-201ENST00000563759 HIST1H2BKO60814 126 aa15.97■□□□□ 0.15
LINC01960-201ENST00000563759 PRM2P04554 102 aa15.97■□□□□ 0.15
LINC01960-201ENST00000563759 HIST1H2BJP06899 126 aa15.97■□□□□ 0.15
LINC01960-201ENST00000563759 HIST1H2BOP23527 126 aa15.97■□□□□ 0.15
LINC01960-201ENST00000563759 HIST1H2BBP33778 126 aa15.97■□□□□ 0.15
LINC01960-201ENST00000563759 HIST1H2BDP58876 126 aa15.97■□□□□ 0.15
LINC01960-201ENST00000563759 HIST1H2BCP62807 126 aa15.97■□□□□ 0.15
LINC01960-201ENST00000563759 HIST2H2BEQ16778 126 aa15.97■□□□□ 0.15
LINC01960-201ENST00000563759 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.97■□□□□ 0.15
LINC01960-201ENST00000563759 ZNF493Q6ZR52 646 aa15.97■□□□□ 0.15
LINC01960-201ENST00000563759 GATD1Q8NB37 220 aa15.97■□□□□ 0.15
LINC01960-201ENST00000563759 HIST1H2BHQ93079 126 aa15.97■□□□□ 0.15
LINC01960-201ENST00000563759 HIST1H2BNQ99877 126 aa15.97■□□□□ 0.15
LINC01960-201ENST00000563759 HIST1H2BMQ99879 126 aa15.97■□□□□ 0.15
LINC01960-201ENST00000563759 ZNF415Q09FC8 603 aa15.96■□□□□ 0.15
LINC01960-201ENST00000563759 KIAA1644Q3SXP7 199 aa15.96■□□□□ 0.15
LINC01960-201ENST00000563759 IGHV4-30-4P0DP06 118 aa15.95■□□□□ 0.14
LINC01960-201ENST00000563759 APOC4P55056 127 aa15.95■□□□□ 0.14
LINC01960-201ENST00000563759 SMIM15Q7Z3B0 74 aa15.95■□□□□ 0.14
LINC01960-201ENST00000563759 CSNK1G2-AS1Q8NCQ2 148 aa15.95■□□□□ 0.14
LINC01960-201ENST00000563759 RIPPLY3P57055 190 aa15.95■□□□□ 0.14
LINC01960-201ENST00000563759 SAMD5Q5TGI4 173 aa15.95■□□□□ 0.14
LINC01960-201ENST00000563759 TMEM191AQ9H0A3 160 aa15.95■□□□□ 0.14
LINC01960-201ENST00000563759 NOTCH1P46531 2555 aa15.93■□□□□ 0.14
LINC01960-201ENST00000563759 KIR2DL5BA0A0G2JN68 375 aa15.93■□□□□ 0.14
LINC01960-201ENST00000563759 KIR2DL5BA0A0G2JPC4 375 aa15.93■□□□□ 0.14
LINC01960-201ENST00000563759 NXPH4O95158 308 aa15.93■□□□□ 0.14
LINC01960-201ENST00000563759 S100A6P06703 90 aa15.93■□□□□ 0.14
LINC01960-201ENST00000563759 DMRTA1Q5VZB9 504 aa15.93■□□□□ 0.14
LINC01960-201ENST00000563759 AMN1Q8IY45 258 aa15.93■□□□□ 0.14
LINC01960-201ENST00000563759 KIR2DL5AQ8N109 375 aa15.93■□□□□ 0.14
LINC01960-201ENST00000563759 SYT8Q8NBV8 401 aa15.93■□□□□ 0.14
LINC01960-201ENST00000563759 KIR2DL5BQ8NHK3 375 aa15.93■□□□□ 0.14
LINC01960-201ENST00000563759 AP1S3Q96PC3 154 aa15.93■□□□□ 0.14
LINC01960-201ENST00000563759 GSN-AS1Q9NRJ2 163 aa15.93■□□□□ 0.14
LINC01960-201ENST00000563759 EVI2AP22794 236 aa15.92■□□□□ 0.14
LINC01960-201ENST00000563759 ZNF705AQ6ZN79 300 aaPredicted RBP15.92■□□□□ 0.14
LINC01960-201ENST00000563759 AZU1P20160 251 aa15.91■□□□□ 0.14
LINC01960-201ENST00000563759 SRIP30626 198 aa15.91■□□□□ 0.14
LINC01960-201ENST00000563759 FAM104BQ5XKR9 115 aa15.91■□□□□ 0.14
LINC01960-201ENST00000563759 C11orf72Q8NBR9 251 aa15.91■□□□□ 0.14
LINC01960-201ENST00000563759 TMEM263Q8WUH6 116 aaKnown RBP15.91■□□□□ 0.14
LINC01960-201ENST00000563759 RCHY1Q96PM5 261 aa15.91■□□□□ 0.14
LINC01960-201ENST00000563759 ZNF876PQ49A33 203 aa15.9■□□□□ 0.14
LINC01960-201ENST00000563759 RNASE8Q8TDE3 154 aaKnown RBP15.89■□□□□ 0.13
LINC01960-201ENST00000563759 MGAM2Q2M2H8 2515 aa15.89■□□□□ 0.13
LINC01960-201ENST00000563759 RRN3P1Q2M238 152 aa15.88■□□□□ 0.13
LINC01960-201ENST00000563759 NBEAL1Q6ZS30 2694 aa15.88■□□□□ 0.13
LINC01960-201ENST00000563759 NDUFA6P56556 154 aa15.88■□□□□ 0.13
LINC01960-201ENST00000563759 DEFB135Q30KP9 77 aa15.88■□□□□ 0.13
LINC01960-201ENST00000563759 C14orf178Q8N769 122 aaPredicted RBP15.88■□□□□ 0.13
LINC01960-201ENST00000563759 C16orf74Q96GX8 76 aa15.88■□□□□ 0.13
LINC01960-201ENST00000563759 DPH3P1Q9H4G8 78 aa15.88■□□□□ 0.13
LINC01960-201ENST00000563759 DNAH3Q8TD57 4116 aa15.87■□□□□ 0.13
LINC01960-201ENST00000563759 M0R2P5 195 aa15.87■□□□□ 0.13
LINC01960-201ENST00000563759 SMIM17P0DL12 118 aa15.87■□□□□ 0.13
LINC01960-201ENST00000563759 MRPL51Q4U2R6 128 aaKnown RBP15.87■□□□□ 0.13
LINC01960-201ENST00000563759 SPXQ9BT56 116 aa15.87■□□□□ 0.13
LINC01960-201ENST00000563759 ALKBH7Q9BT30 221 aaPredicted RBP15.86■□□□□ 0.13
LINC01960-201ENST00000563759 RAB4AP20338 218 aa15.86■□□□□ 0.13
LINC01960-201ENST00000563759 RNF185Q96GF1 192 aa15.86■□□□□ 0.13
LINC01960-201ENST00000563759 NACAE9PAV3 2078 aa15.85■□□□□ 0.13
LINC01960-201ENST00000563759 D6R8Y8 96 aa15.85■□□□□ 0.13
LINC01960-201ENST00000563759 JPT2Q9H910 190 aa15.85■□□□□ 0.13
LINC01960-201ENST00000563759 NBEAL2Q6ZNJ1 2754 aa15.85■□□□□ 0.13
LINC01960-201ENST00000563759 UBE2CO00762 179 aa15.84■□□□□ 0.13
LINC01960-201ENST00000563759 MGPP08493 103 aa15.84■□□□□ 0.13
LINC01960-201ENST00000563759 CKS2P33552 79 aa15.84■□□□□ 0.13
LINC01960-201ENST00000563759 ORMDL3Q8N138 153 aa15.84■□□□□ 0.13
LINC01960-201ENST00000563759 IL17DQ8TAD2 202 aa15.84■□□□□ 0.13
LINC01960-201ENST00000563759 FAM74A4Q5TZK3 123 aa15.84■□□□□ 0.13
LINC01960-201ENST00000563759 MRPL16Q9NX20 251 aaKnown RBP15.84■□□□□ 0.13
LINC01960-201ENST00000563759 A0A087WWL8 130 aa15.83■□□□□ 0.12
LINC01960-201ENST00000563759 A8MZ25 164 aa15.83■□□□□ 0.12
LINC01960-201ENST00000563759 NCR2O95944 276 aa15.83■□□□□ 0.12
LINC01960-201ENST00000563759 SNRPEP62304 92 aaKnown RBP15.82■□□□□ 0.12
LINC01960-201ENST00000563759 SMKR1H3BMG3 65 aa15.82■□□□□ 0.12
LINC01960-201ENST00000563759 OR10J3Q5JRS4 329 aa15.82■□□□□ 0.12
LINC01960-201ENST00000563759 C18orf32Q8TCD1 76 aa15.82■□□□□ 0.12
LINC01960-201ENST00000563759 PRELID3AQ96N28 172 aa15.82■□□□□ 0.12
LINC01960-201ENST00000563759 PPBPP02775 128 aa15.81■□□□□ 0.12
LINC01960-201ENST00000563759 PIK3CD-AS1Q5SR53 167 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms