RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 C9orf85Q96MD7 179 aa8.96□□□□□ -0.98
CTDSPL2-209ENST00000560620 MANBALQ9NQG1 85 aa8.96□□□□□ -0.98
CTDSPL2-209ENST00000560620 H3BVH4 76 aa8.95□□□□□ -0.98
CTDSPL2-209ENST00000560620 SULT1A2P50226 295 aa8.95□□□□□ -0.98
CTDSPL2-209ENST00000560620 CRIP1P50238 77 aa8.95□□□□□ -0.98
CTDSPL2-209ENST00000560620 CCL20P78556 96 aa8.95□□□□□ -0.98
CTDSPL2-209ENST00000560620 CFAP126Q5VTH2 177 aa8.95□□□□□ -0.98
CTDSPL2-209ENST00000560620 BAGE2Q86Y30 109 aa8.95□□□□□ -0.98
CTDSPL2-209ENST00000560620 C6orf223Q8N319 242 aa8.95□□□□□ -0.98
CTDSPL2-209ENST00000560620 TXNDC17Q9BRA2 123 aa8.95□□□□□ -0.98
CTDSPL2-209ENST00000560620 UPK3BQ9BT76 320 aa8.95□□□□□ -0.98
CTDSPL2-209ENST00000560620 DNAH6Q9C0G6 4158 aa8.94□□□□□ -0.98
CTDSPL2-209ENST00000560620 TRBV6-1A0A0K0K1D8 114 aa8.94□□□□□ -0.98
CTDSPL2-209ENST00000560620 KRBOX1C9JBD0 128 aa8.94□□□□□ -0.98
CTDSPL2-209ENST00000560620 SIVA1O15304 175 aa8.94□□□□□ -0.98
CTDSPL2-209ENST00000560620 NXPH4O95158 308 aa8.94□□□□□ -0.98
CTDSPL2-209ENST00000560620 IFNA1P01562 189 aa8.94□□□□□ -0.98
CTDSPL2-209ENST00000560620 PRR27Q6MZM9 219 aa8.94□□□□□ -0.98
CTDSPL2-209ENST00000560620 LYPD5Q6UWN5 251 aa8.94□□□□□ -0.98
CTDSPL2-209ENST00000560620 SYT8Q8NBV8 401 aa8.94□□□□□ -0.98
CTDSPL2-209ENST00000560620 PRADC1Q9BSG0 188 aa8.94□□□□□ -0.98
CTDSPL2-209ENST00000560620 DNAH10Q8IVF4 4471 aa8.93□□□□□ -0.98
CTDSPL2-209ENST00000560620 TRAV1-1A0A0B4J248 108 aa8.93□□□□□ -0.98
CTDSPL2-209ENST00000560620 LOC100131303A0A0U1RQF7 123 aa8.93□□□□□ -0.98
CTDSPL2-209ENST00000560620 RS1O15537 224 aa8.93□□□□□ -0.98
CTDSPL2-209ENST00000560620 CIDEAO60543 219 aa8.93□□□□□ -0.98
CTDSPL2-209ENST00000560620 ARMS2P0C7Q2 107 aa8.93□□□□□ -0.98
CTDSPL2-209ENST00000560620 GATA1P15976 413 aaPredicted RBP8.93□□□□□ -0.98
CTDSPL2-209ENST00000560620 ZNF674Q2M3X9 581 aa8.93□□□□□ -0.98
CTDSPL2-209ENST00000560620 COX8CQ7Z4L0 72 aa8.93□□□□□ -0.98
CTDSPL2-209ENST00000560620 IL36BQ9NZH7 164 aa8.93□□□□□ -0.98
CTDSPL2-209ENST00000560620 PHLDA3Q9Y5J5 127 aa8.93□□□□□ -0.98
CTDSPL2-209ENST00000560620 A8MWV9 139 aa8.92□□□□□ -0.98
CTDSPL2-209ENST00000560620 MGST1P10620 155 aaKnown RBP8.92□□□□□ -0.98
CTDSPL2-209ENST00000560620 RPL35P42766 123 aaKnown RBP8.92□□□□□ -0.98
CTDSPL2-209ENST00000560620 RHOHQ15669 191 aa8.92□□□□□ -0.98
CTDSPL2-209ENST00000560620 C9orf62Q8N4C0 152 aa8.92□□□□□ -0.98
CTDSPL2-209ENST00000560620 SLC25A29Q8N8R3 303 aa8.92□□□□□ -0.98
CTDSPL2-209ENST00000560620 PTH2Q96A98 100 aa8.92□□□□□ -0.98
CTDSPL2-209ENST00000560620 M0R381 172 aa8.91□□□□□ -0.98
CTDSPL2-209ENST00000560620 LINC01559Q495D7 138 aa8.91□□□□□ -0.98
CTDSPL2-209ENST00000560620 FAM74A4Q5TZK3 123 aa8.91□□□□□ -0.98
CTDSPL2-209ENST00000560620 SH2D6Q7Z4S9 175 aa8.91□□□□□ -0.98
CTDSPL2-209ENST00000560620 DERL1Q9BUN8 251 aa8.91□□□□□ -0.98
CTDSPL2-209ENST00000560620 TRBV6-4A0A1B0GX49 114 aa8.9□□□□□ -0.98
CTDSPL2-209ENST00000560620 A0A1W2PPQ1 181 aa8.9□□□□□ -0.98
CTDSPL2-209ENST00000560620 MEF2BQ02080 365 aaPredicted RBP8.9□□□□□ -0.98
CTDSPL2-209ENST00000560620 DMRTA1Q5VZB9 504 aa8.9□□□□□ -0.98
CTDSPL2-209ENST00000560620 ALKAL2Q6UX46 152 aa8.9□□□□□ -0.98
CTDSPL2-209ENST00000560620 KRTAP1-5Q9BYS1 174 aa8.9□□□□□ -0.98
CTDSPL2-209ENST00000560620 PARLQ9H300 379 aa8.9□□□□□ -0.98
CTDSPL2-209ENST00000560620 JPT2Q9H910 190 aa8.9□□□□□ -0.98
CTDSPL2-209ENST00000560620 TRAV9-2A0A087WT02 112 aa8.89□□□□□ -0.99
CTDSPL2-209ENST00000560620 A0A1B0GVG6 124 aa8.89□□□□□ -0.99
CTDSPL2-209ENST00000560620 PDE6DO43924 150 aa8.89□□□□□ -0.99
CTDSPL2-209ENST00000560620 RPL19P84098 196 aaKnown RBP8.89□□□□□ -0.99
CTDSPL2-209ENST00000560620 TNP2Q05952 138 aa8.89□□□□□ -0.99
CTDSPL2-209ENST00000560620 CENPWQ5EE01 88 aa8.89□□□□□ -0.99
CTDSPL2-209ENST00000560620 PIK3CD-AS1Q5SR53 167 aa8.89□□□□□ -0.99
CTDSPL2-209ENST00000560620 DNLZQ5SXM8 178 aa8.89□□□□□ -0.99
CTDSPL2-209ENST00000560620 DAZAP1Q96EP5 407 aaKnown RBP8.89□□□□□ -0.99
CTDSPL2-209ENST00000560620 MED9Q9NWA0 146 aa8.89□□□□□ -0.99
CTDSPL2-209ENST00000560620 LY96Q9Y6Y9 160 aa8.89□□□□□ -0.99
CTDSPL2-209ENST00000560620 DNAH2Q9P225 4427 aa8.88□□□□□ -0.99
CTDSPL2-209ENST00000560620 A0A087WWL8 130 aa8.88□□□□□ -0.99
CTDSPL2-209ENST00000560620 A0A1B0GVY2 172 aa8.88□□□□□ -0.99
CTDSPL2-209ENST00000560620 RHODO00212 210 aa8.88□□□□□ -0.99
CTDSPL2-209ENST00000560620 BCL2P10415 239 aa8.88□□□□□ -0.99
CTDSPL2-209ENST00000560620 GNG4P50150 75 aa8.88□□□□□ -0.99
CTDSPL2-209ENST00000560620 NKX2-5P52952 324 aaPredicted RBP8.88□□□□□ -0.99
CTDSPL2-209ENST00000560620 SSTP61278 116 aa8.88□□□□□ -0.99
CTDSPL2-209ENST00000560620 ZFP2Q6ZN57 461 aa8.88□□□□□ -0.99
CTDSPL2-209ENST00000560620 WFDC10BQ8IUB3 73 aa8.88□□□□□ -0.99
CTDSPL2-209ENST00000560620 ZFP82Q8N141 532 aa8.88□□□□□ -0.99
CTDSPL2-209ENST00000560620 C11orf52Q96A22 123 aa8.88□□□□□ -0.99
CTDSPL2-209ENST00000560620 MLST8Q9BVC4 326 aa8.88□□□□□ -0.99
CTDSPL2-209ENST00000560620 SAMD10Q9BYL1 202 aa8.88□□□□□ -0.99
CTDSPL2-209ENST00000560620 VAX2Q9UIW0 290 aa8.88□□□□□ -0.99
CTDSPL2-209ENST00000560620 RAB19A4D1S5 217 aa8.87□□□□□ -0.99
CTDSPL2-209ENST00000560620 GAGE12JA6NER3 117 aa8.87□□□□□ -0.99
CTDSPL2-209ENST00000560620 EVI2AP22794 236 aa8.87□□□□□ -0.99
CTDSPL2-209ENST00000560620 BLOC1S1P78537 153 aa8.87□□□□□ -0.99
CTDSPL2-209ENST00000560620 GAGE1Q13065 139 aa8.87□□□□□ -0.99
CTDSPL2-209ENST00000560620 GAGE4Q13068 117 aa8.87□□□□□ -0.99
CTDSPL2-209ENST00000560620 GAGE5Q13069 117 aa8.87□□□□□ -0.99
CTDSPL2-209ENST00000560620 GAGE13Q4V321 117 aa8.87□□□□□ -0.99
CTDSPL2-209ENST00000560620 OR10J3Q5JRS4 329 aa8.87□□□□□ -0.99
CTDSPL2-209ENST00000560620 ATP6V0E2Q8NHE4 81 aa8.87□□□□□ -0.99
CTDSPL2-209ENST00000560620 TRAV8-6A0A0B4J262 113 aa8.86□□□□□ -0.99
CTDSPL2-209ENST00000560620 MUC21A0A0G2JKD1 596 aa8.86□□□□□ -0.99
CTDSPL2-209ENST00000560620 MUC21A0A140T8X8 626 aa8.86□□□□□ -0.99
CTDSPL2-209ENST00000560620 TAGLN2P37802 199 aaKnown RBP8.86□□□□□ -0.99
CTDSPL2-209ENST00000560620 LINC00315P59091 139 aa8.86□□□□□ -0.99
CTDSPL2-209ENST00000560620 SPANXN1Q5VSR9 72 aa8.86□□□□□ -0.99
CTDSPL2-209ENST00000560620 Q6ZSN1 163 aa8.86□□□□□ -0.99
CTDSPL2-209ENST00000560620 SFRP2Q96HF1 295 aa8.86□□□□□ -0.99
CTDSPL2-209ENST00000560620 TPPP3Q9BW30 176 aa8.86□□□□□ -0.99
CTDSPL2-209ENST00000560620 SCRT2Q9NQ03 307 aa8.86□□□□□ -0.99
CTDSPL2-209ENST00000560620 IGHV3-38A0A0C4DH36 116 aa8.84□□□□□ -0.99
CTDSPL2-209ENST00000560620 MED14OSP0DP75 135 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms