RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 MIFP14174 115 aa6.7□□□□□ -1.34
HERC1-206ENST00000559996 TCL1AP56279 114 aa6.7□□□□□ -1.34
HERC1-206ENST00000559996 RRN3P1Q2M238 152 aa6.7□□□□□ -1.34
HERC1-206ENST00000559996 SVBPQ8N300 66 aa6.7□□□□□ -1.34
HERC1-206ENST00000559996 TSKUQ8WUA8 353 aa6.7□□□□□ -1.34
HERC1-206ENST00000559996 TMEM263Q8WUH6 116 aaKnown RBP6.7□□□□□ -1.34
HERC1-206ENST00000559996 TMEM208Q9BTX3 173 aa6.7□□□□□ -1.34
HERC1-206ENST00000559996 IL36BQ9NZH7 164 aa6.7□□□□□ -1.34
HERC1-206ENST00000559996 COL7A1Q02388 2944 aa6.7□□□□□ -1.34
HERC1-206ENST00000559996 FAM231BA6NCW3 169 aa6.69□□□□□ -1.34
HERC1-206ENST00000559996 A8MWL6 223 aa6.69□□□□□ -1.34
HERC1-206ENST00000559996 PPP1R2P9O14990 202 aa6.69□□□□□ -1.34
HERC1-206ENST00000559996 DEFB4AO15263 64 aa6.69□□□□□ -1.34
HERC1-206ENST00000559996 SNAPINO95295 136 aa6.69□□□□□ -1.34
HERC1-206ENST00000559996 MT-ND4LP03901 98 aa6.69□□□□□ -1.34
HERC1-206ENST00000559996 OR5AL1P0C617 328 aa6.69□□□□□ -1.34
HERC1-206ENST00000559996 MED14OSP0DP75 135 aa6.69□□□□□ -1.34
HERC1-206ENST00000559996 FAM3BP58499 235 aaPredicted RBP6.69□□□□□ -1.34
HERC1-206ENST00000559996 RPS20P60866 119 aaKnown RBP6.69□□□□□ -1.34
HERC1-206ENST00000559996 DAZ2Q13117 558 aaKnown RBP6.69□□□□□ -1.34
HERC1-206ENST00000559996 RHEBQ15382 184 aa6.69□□□□□ -1.34
HERC1-206ENST00000559996 LYZL1Q6UWQ5 148 aa6.69□□□□□ -1.34
HERC1-206ENST00000559996 ZNF493Q6ZR52 646 aa6.69□□□□□ -1.34
HERC1-206ENST00000559996 LINC00612Q8N6U2 182 aa6.69□□□□□ -1.34
HERC1-206ENST00000559996 C15orf54Q8N8G6 183 aa6.69□□□□□ -1.34
HERC1-206ENST00000559996 NUP35Q8NFH5 326 aa6.69□□□□□ -1.34
HERC1-206ENST00000559996 PTH2Q96A98 100 aa6.69□□□□□ -1.34
HERC1-206ENST00000559996 C16orf74Q96GX8 76 aa6.69□□□□□ -1.34
HERC1-206ENST00000559996 YPEL4Q96NS1 127 aa6.69□□□□□ -1.34
HERC1-206ENST00000559996 SPATA25Q9BR10 227 aa6.69□□□□□ -1.34
HERC1-206ENST00000559996 CNFNQ9BYD5 112 aa6.69□□□□□ -1.34
HERC1-206ENST00000559996 CTDSP1Q9GZU7 261 aa6.69□□□□□ -1.34
HERC1-206ENST00000559996 GFRA4Q9GZZ7 299 aa6.69□□□□□ -1.34
HERC1-206ENST00000559996 RPS10P5Q9NQ39 176 aa6.69□□□□□ -1.34
HERC1-206ENST00000559996 TRGV11A0A075B6L2 103 aa6.68□□□□□ -1.34
HERC1-206ENST00000559996 IGHV4-4A0A075B6R2 117 aa6.68□□□□□ -1.34
HERC1-206ENST00000559996 MUC21A0A0G2JKD1 596 aa6.68□□□□□ -1.34
HERC1-206ENST00000559996 MUC21A0A140T8X8 626 aa6.68□□□□□ -1.34
HERC1-206ENST00000559996 H3BVH4 76 aa6.68□□□□□ -1.34
HERC1-206ENST00000559996 SPINK4O60575 86 aa6.68□□□□□ -1.34
HERC1-206ENST00000559996 ASIPP42127 132 aa6.68□□□□□ -1.34
HERC1-206ENST00000559996 POM121L12Q8N7R1 296 aa6.68□□□□□ -1.34
HERC1-206ENST00000559996 OR10AG1Q8NH19 301 aa6.68□□□□□ -1.34
HERC1-206ENST00000559996 RASL10AQ92737 203 aa6.68□□□□□ -1.34
HERC1-206ENST00000559996 MSRB1Q9NZV6 116 aa6.68□□□□□ -1.34
HERC1-206ENST00000559996 CELA1Q9UNI1 258 aa6.68□□□□□ -1.34
HERC1-206ENST00000559996 HIGD1CA8MV81 97 aa6.67□□□□□ -1.34
HERC1-206ENST00000559996 NXPH4O95158 308 aa6.67□□□□□ -1.34
HERC1-206ENST00000559996 S100A1P23297 94 aa6.67□□□□□ -1.34
HERC1-206ENST00000559996 CTRLP40313 264 aa6.67□□□□□ -1.34
HERC1-206ENST00000559996 WDR73Q6P4I2 378 aa6.67□□□□□ -1.34
HERC1-206ENST00000559996 FER1L6-AS1Q8NA97 138 aa6.67□□□□□ -1.34
HERC1-206ENST00000559996 PGLYRP4Q96LB8 373 aa6.67□□□□□ -1.34
HERC1-206ENST00000559996 IMMP2LQ96T52 175 aa6.67□□□□□ -1.34
HERC1-206ENST00000559996 SPXQ9BT56 116 aa6.67□□□□□ -1.34
HERC1-206ENST00000559996 C11orf68Q9H3H3 251 aaKnown RBP6.67□□□□□ -1.34
HERC1-206ENST00000559996 JPT2Q9H910 190 aa6.67□□□□□ -1.34
HERC1-206ENST00000559996 NOP10Q9NPE3 64 aaKnown RBP6.67□□□□□ -1.34
HERC1-206ENST00000559996 DKK2Q9UBU2 259 aa6.67□□□□□ -1.34
HERC1-206ENST00000559996 TIMM8BQ9Y5J9 83 aaPredicted RBP6.67□□□□□ -1.34
HERC1-206ENST00000559996 FBN3Q75N90 2809 aa6.67□□□□□ -1.34
HERC1-206ENST00000559996 A0A0J9YWU9 116 aa6.66□□□□□ -1.34
HERC1-206ENST00000559996 A0A1W2PPQ1 181 aa6.66□□□□□ -1.34
HERC1-206ENST00000559996 XKRY2A2RUG3 117 aa6.66□□□□□ -1.34
HERC1-206ENST00000559996 SCO1O75880 301 aa6.66□□□□□ -1.34
HERC1-206ENST00000559996 NHLRC4P0CG21 123 aaPredicted RBP6.66□□□□□ -1.34
HERC1-206ENST00000559996 NTF3P20783 257 aa6.66□□□□□ -1.34
HERC1-206ENST00000559996 ZNF415Q09FC8 603 aa6.66□□□□□ -1.34
HERC1-206ENST00000559996 UFSP1Q6NVU6 142 aa6.66□□□□□ -1.34
HERC1-206ENST00000559996 Q6ZTI0 123 aa6.66□□□□□ -1.34
HERC1-206ENST00000559996 NACAE9PAV3 2078 aa6.65□□□□□ -1.34
HERC1-206ENST00000559996 A0A1B0GXF2 115 aa6.65□□□□□ -1.34
HERC1-206ENST00000559996 F2Z2F3 143 aa6.65□□□□□ -1.34
HERC1-206ENST00000559996 M0R2P5 195 aa6.65□□□□□ -1.34
HERC1-206ENST00000559996 CRYGDP07320 174 aa6.65□□□□□ -1.34
HERC1-206ENST00000559996 S100A4P26447 101 aaKnown RBP6.65□□□□□ -1.34
HERC1-206ENST00000559996 EMP1P54849 157 aa6.65□□□□□ -1.34
HERC1-206ENST00000559996 LINC00315P59091 139 aa6.65□□□□□ -1.34
HERC1-206ENST00000559996 ELOBQ15370 118 aa6.65□□□□□ -1.34
HERC1-206ENST00000559996 LGALS9BQ3B8N2 356 aa6.65□□□□□ -1.34
HERC1-206ENST00000559996 PIK3CD-AS1Q5SR53 167 aa6.65□□□□□ -1.34
HERC1-206ENST00000559996 FAM222AQ5U5X8 452 aa6.65□□□□□ -1.34
HERC1-206ENST00000559996 ZMAT4Q9H898 229 aa6.65□□□□□ -1.34
HERC1-206ENST00000559996 EDA2RQ9HAV5 297 aa6.65□□□□□ -1.34
HERC1-206ENST00000559996 MRPL16Q9NX20 251 aaKnown RBP6.65□□□□□ -1.34
HERC1-206ENST00000559996 NAT8BQ9UHF3 227 aa6.65□□□□□ -1.34
HERC1-206ENST00000559996 KIF25-AS1Q9Y6Z4 181 aa6.65□□□□□ -1.34
HERC1-206ENST00000559996 CXorf65A6NEN9 183 aa6.64□□□□□ -1.35
HERC1-206ENST00000559996 SNURFLB1AK76 121 aa6.64□□□□□ -1.35
HERC1-206ENST00000559996 C12orf74Q32Q52 190 aa6.64□□□□□ -1.35
HERC1-206ENST00000559996 TMEM88Q6PEY1 159 aa6.64□□□□□ -1.35
HERC1-206ENST00000559996 CBLN2Q8IUK8 224 aa6.64□□□□□ -1.35
HERC1-206ENST00000559996 C18orf15Q96N68 181 aa6.64□□□□□ -1.35
HERC1-206ENST00000559996 SAMD10Q9BYL1 202 aa6.64□□□□□ -1.35
HERC1-206ENST00000559996 TRGV1A0A0A0MS02 117 aa6.63□□□□□ -1.35
HERC1-206ENST00000559996 A0A1B0GUT8 65 aa6.63□□□□□ -1.35
HERC1-206ENST00000559996 LYRM9A8MSI8 78 aa6.63□□□□□ -1.35
HERC1-206ENST00000559996 RS1O15537 224 aa6.63□□□□□ -1.35
HERC1-206ENST00000559996 SSTP61278 116 aa6.63□□□□□ -1.35
HERC1-206ENST00000559996 ZNF876PQ49A33 203 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms