RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 DNAH10Q8IVF4 4471 aa5.63□□□□□ -1.51
SNX1-207ENST00000559401 SCO2A0A1W2PP80 73 aa5.63□□□□□ -1.51
SNX1-207ENST00000559401 TEX46H3BTG2 121 aa5.63□□□□□ -1.51
SNX1-207ENST00000559401 RS1O15537 224 aa5.63□□□□□ -1.51
SNX1-207ENST00000559401 RNASE3P12724 160 aaKnown RBP5.63□□□□□ -1.51
SNX1-207ENST00000559401 TNP2Q05952 138 aa5.63□□□□□ -1.51
SNX1-207ENST00000559401 RHOHQ15669 191 aa5.63□□□□□ -1.51
SNX1-207ENST00000559401 CFAP126Q5VTH2 177 aa5.63□□□□□ -1.51
SNX1-207ENST00000559401 AKAP14Q86UN6 197 aa5.63□□□□□ -1.51
SNX1-207ENST00000559401 TCTE3Q8IZS6 198 aa5.63□□□□□ -1.51
SNX1-207ENST00000559401 PRADC1Q9BSG0 188 aa5.63□□□□□ -1.51
SNX1-207ENST00000559401 GNG13Q9P2W3 67 aa5.63□□□□□ -1.51
SNX1-207ENST00000559401 DNAH6Q9C0G6 4158 aa5.63□□□□□ -1.51
SNX1-207ENST00000559401 TRBV6-1A0A0K0K1D8 114 aa5.62□□□□□ -1.51
SNX1-207ENST00000559401 A0A1W2PPQ1 181 aa5.62□□□□□ -1.51
SNX1-207ENST00000559401 LTAP01374 205 aa5.62□□□□□ -1.51
SNX1-207ENST00000559401 C1QBP02746 253 aa5.62□□□□□ -1.51
SNX1-207ENST00000559401 S100A9P06702 114 aaKnown RBP5.62□□□□□ -1.51
SNX1-207ENST00000559401 GATA1P15976 413 aaPredicted RBP5.62□□□□□ -1.51
SNX1-207ENST00000559401 RAB5CP51148 216 aa5.62□□□□□ -1.51
SNX1-207ENST00000559401 PRR27Q6MZM9 219 aa5.62□□□□□ -1.51
SNX1-207ENST00000559401 SLC25A29Q8N8R3 303 aa5.62□□□□□ -1.51
SNX1-207ENST00000559401 SYT8Q8NBV8 401 aa5.62□□□□□ -1.51
SNX1-207ENST00000559401 MANBALQ9NQG1 85 aa5.62□□□□□ -1.51
SNX1-207ENST00000559401 PHLDA3Q9Y5J5 127 aa5.62□□□□□ -1.51
SNX1-207ENST00000559401 TRAV9-2A0A087WT02 112 aa5.61□□□□□ -1.51
SNX1-207ENST00000559401 A8MWV9 139 aa5.61□□□□□ -1.51
SNX1-207ENST00000559401 KRBOX1C9JBD0 128 aa5.61□□□□□ -1.51
SNX1-207ENST00000559401 M0R381 172 aa5.61□□□□□ -1.51
SNX1-207ENST00000559401 CIDEAO60543 219 aa5.61□□□□□ -1.51
SNX1-207ENST00000559401 IFNA1P01562 189 aa5.61□□□□□ -1.51
SNX1-207ENST00000559401 ARMS2P0C7Q2 107 aa5.61□□□□□ -1.51
SNX1-207ENST00000559401 MGST1P10620 155 aaKnown RBP5.61□□□□□ -1.51
SNX1-207ENST00000559401 CRIP1P50238 77 aa5.61□□□□□ -1.51
SNX1-207ENST00000559401 LINC00315P59091 139 aa5.61□□□□□ -1.51
SNX1-207ENST00000559401 ZNF674Q2M3X9 581 aa5.61□□□□□ -1.51
SNX1-207ENST00000559401 FAM74A4Q5TZK3 123 aa5.61□□□□□ -1.51
SNX1-207ENST00000559401 SH2D6Q7Z4S9 175 aa5.61□□□□□ -1.51
SNX1-207ENST00000559401 SLC51BQ86UW2 128 aa5.61□□□□□ -1.51
SNX1-207ENST00000559401 ZNF575Q86XF7 245 aa5.61□□□□□ -1.51
SNX1-207ENST00000559401 FRAS1Q86XX4 4008 aa5.61□□□□□ -1.51
SNX1-207ENST00000559401 BAGE2Q86Y30 109 aa5.61□□□□□ -1.51
SNX1-207ENST00000559401 WFDC10BQ8IUB3 73 aa5.61□□□□□ -1.51
SNX1-207ENST00000559401 PTH2Q96A98 100 aa5.61□□□□□ -1.51
SNX1-207ENST00000559401 PARLQ9H300 379 aa5.61□□□□□ -1.51
SNX1-207ENST00000559401 IL36BQ9NZH7 164 aa5.61□□□□□ -1.51
SNX1-207ENST00000559401 LY96Q9Y6Y9 160 aa5.61□□□□□ -1.51
SNX1-207ENST00000559401 TRBV6-4A0A1B0GX49 114 aa5.6□□□□□ -1.51
SNX1-207ENST00000559401 EVI2AP22794 236 aa5.6□□□□□ -1.51
SNX1-207ENST00000559401 SULT1A2P50226 295 aa5.6□□□□□ -1.51
SNX1-207ENST00000559401 CCL20P78556 96 aa5.6□□□□□ -1.51
SNX1-207ENST00000559401 LINC01559Q495D7 138 aa5.6□□□□□ -1.51
SNX1-207ENST00000559401 OR10J3Q5JRS4 329 aa5.6□□□□□ -1.51
SNX1-207ENST00000559401 COX8CQ7Z4L0 72 aa5.6□□□□□ -1.51
SNX1-207ENST00000559401 JPT2Q9H910 190 aa5.6□□□□□ -1.51
SNX1-207ENST00000559401 TRAV8-6A0A0B4J262 113 aa5.59□□□□□ -1.51
SNX1-207ENST00000559401 GAGE12JA6NER3 117 aa5.59□□□□□ -1.51
SNX1-207ENST00000559401 C16orf90A8MZG2 172 aa5.59□□□□□ -1.51
SNX1-207ENST00000559401 RHODO00212 210 aa5.59□□□□□ -1.51
SNX1-207ENST00000559401 RPL35P42766 123 aaKnown RBP5.59□□□□□ -1.51
SNX1-207ENST00000559401 RPL19P84098 196 aaKnown RBP5.59□□□□□ -1.51
SNX1-207ENST00000559401 GAGE1Q13065 139 aa5.59□□□□□ -1.51
SNX1-207ENST00000559401 GAGE4Q13068 117 aa5.59□□□□□ -1.51
SNX1-207ENST00000559401 GAGE5Q13069 117 aa5.59□□□□□ -1.51
SNX1-207ENST00000559401 GAGE13Q4V321 117 aa5.59□□□□□ -1.51
SNX1-207ENST00000559401 DMRTA1Q5VZB9 504 aa5.59□□□□□ -1.51
SNX1-207ENST00000559401 ZFP2Q6ZN57 461 aa5.59□□□□□ -1.51
SNX1-207ENST00000559401 ZFP82Q8N141 532 aa5.59□□□□□ -1.51
SNX1-207ENST00000559401 ATP6V0E2Q8NHE4 81 aa5.59□□□□□ -1.51
SNX1-207ENST00000559401 DERL1Q9BUN8 251 aa5.59□□□□□ -1.51
SNX1-207ENST00000559401 SAMD10Q9BYL1 202 aa5.59□□□□□ -1.51
SNX1-207ENST00000559401 A0A087WWL8 130 aa5.58□□□□□ -1.52
SNX1-207ENST00000559401 TRAV1-1A0A0B4J248 108 aa5.58□□□□□ -1.52
SNX1-207ENST00000559401 CRYGDP07320 174 aa5.58□□□□□ -1.52
SNX1-207ENST00000559401 BTF3P20290 206 aaKnown RBP5.58□□□□□ -1.52
SNX1-207ENST00000559401 SSTP61278 116 aa5.58□□□□□ -1.52
SNX1-207ENST00000559401 MEF2BQ02080 365 aaPredicted RBP5.58□□□□□ -1.52
SNX1-207ENST00000559401 CENPWQ5EE01 88 aa5.58□□□□□ -1.52
SNX1-207ENST00000559401 PIK3CD-AS1Q5SR53 167 aa5.58□□□□□ -1.52
SNX1-207ENST00000559401 DNLZQ5SXM8 178 aa5.58□□□□□ -1.52
SNX1-207ENST00000559401 SPATA12Q7Z6I5 190 aa5.58□□□□□ -1.52
SNX1-207ENST00000559401 NFE4Q86UQ8 179 aa5.58□□□□□ -1.52
SNX1-207ENST00000559401 C11orf52Q96A22 123 aa5.58□□□□□ -1.52
SNX1-207ENST00000559401 MSRB1Q9NZV6 116 aa5.58□□□□□ -1.52
SNX1-207ENST00000559401 TNFRSF18Q9Y5U5 241 aa5.58□□□□□ -1.52
SNX1-207ENST00000559401 HECTD4Q9Y4D8 3996 aa5.57□□□□□ -1.52
SNX1-207ENST00000559401 IGHV3-38A0A0C4DH36 116 aa5.57□□□□□ -1.52
SNX1-207ENST00000559401 MUC21A0A0G2JKD1 596 aa5.57□□□□□ -1.52
SNX1-207ENST00000559401 MUC21A0A140T8X8 626 aa5.57□□□□□ -1.52
SNX1-207ENST00000559401 EREGO14944 169 aa5.57□□□□□ -1.52
SNX1-207ENST00000559401 PDE6DO43924 150 aa5.57□□□□□ -1.52
SNX1-207ENST00000559401 IGHV3-30P01768 117 aa5.57□□□□□ -1.52
SNX1-207ENST00000559401 IGHV3-33P01772 117 aa5.57□□□□□ -1.52
SNX1-207ENST00000559401 DNAH10OSP0CZ25 163 aa5.57□□□□□ -1.52
SNX1-207ENST00000559401 IGHV3-30-3P0DP02 117 aa5.57□□□□□ -1.52
SNX1-207ENST00000559401 IGHV3-30-5P0DP03 117 aa5.57□□□□□ -1.52
SNX1-207ENST00000559401 MED14OSP0DP75 135 aa5.57□□□□□ -1.52
SNX1-207ENST00000559401 BCL2P10415 239 aa5.57□□□□□ -1.52
SNX1-207ENST00000559401 GNG4P50150 75 aa5.57□□□□□ -1.52
SNX1-207ENST00000559401 TIRAPP58753 221 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms