RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 STAG3L2P0CL84 134 aa3.75□□□□□ -1.81
SMAD3-209ENST00000558894 STAG3L3P0CL85 134 aa3.75□□□□□ -1.81
SMAD3-209ENST00000558894 ZNF80P51504 273 aaPredicted RBP3.75□□□□□ -1.81
SMAD3-209ENST00000558894 XGP55808 180 aa3.75□□□□□ -1.81
SMAD3-209ENST00000558894 ZNF415Q09FC8 603 aa3.75□□□□□ -1.81
SMAD3-209ENST00000558894 WFDC10BQ8IUB3 73 aa3.75□□□□□ -1.81
SMAD3-209ENST00000558894 OTORQ9NRC9 128 aa3.75□□□□□ -1.81
SMAD3-209ENST00000558894 ICOSQ9Y6W8 199 aa3.75□□□□□ -1.81
SMAD3-209ENST00000558894 DMBT1Q9UGM3 2413 aaPredicted RBP3.75□□□□□ -1.81
SMAD3-209ENST00000558894 LOC100131303A0A0U1RQF7 123 aa3.74□□□□□ -1.81
SMAD3-209ENST00000558894 C1orf196B1AJZ1 125 aa3.74□□□□□ -1.81
SMAD3-209ENST00000558894 G3V3Q6 166 aa3.74□□□□□ -1.81
SMAD3-209ENST00000558894 H0Y8G0 127 aa3.74□□□□□ -1.81
SMAD3-209ENST00000558894 HMGB3O15347 200 aaKnown RBP3.74□□□□□ -1.81
SMAD3-209ENST00000558894 DLEU1O43261 78 aa3.74□□□□□ -1.81
SMAD3-209ENST00000558894 SSNA1O43805 119 aa3.74□□□□□ -1.81
SMAD3-209ENST00000558894 PPBPP02775 128 aa3.74□□□□□ -1.81
SMAD3-209ENST00000558894 DNAH10OSP0CZ25 163 aa3.74□□□□□ -1.81
SMAD3-209ENST00000558894 DDTP30046 118 aa3.74□□□□□ -1.81
SMAD3-209ENST00000558894 GNG5P63218 68 aa3.74□□□□□ -1.81
SMAD3-209ENST00000558894 SLAQ13239 276 aa3.74□□□□□ -1.81
SMAD3-209ENST00000558894 MRPL23Q16540 153 aaKnown RBP3.74□□□□□ -1.81
SMAD3-209ENST00000558894 TMEM183BQ1AE95 376 aa3.74□□□□□ -1.81
SMAD3-209ENST00000558894 KHDC3LQ587J8 217 aa3.74□□□□□ -1.81
SMAD3-209ENST00000558894 DPPA3Q6W0C5 159 aa3.74□□□□□ -1.81
SMAD3-209ENST00000558894 NEGR1Q7Z3B1 354 aa3.74□□□□□ -1.81
SMAD3-209ENST00000558894 TMEM183AQ8IXX5 376 aa3.74□□□□□ -1.81
SMAD3-209ENST00000558894 C15orf54Q8N8G6 183 aa3.74□□□□□ -1.81
SMAD3-209ENST00000558894 OR2G3Q8NGZ4 309 aa3.74□□□□□ -1.81
SMAD3-209ENST00000558894 SPXQ9BT56 116 aa3.74□□□□□ -1.81
SMAD3-209ENST00000558894 KRTAP9-2Q9BYQ4 174 aa3.74□□□□□ -1.81
SMAD3-209ENST00000558894 MRPL18Q9H0U6 180 aaKnown RBP3.74□□□□□ -1.81
SMAD3-209ENST00000558894 A0A087WTM6 91 aa3.73□□□□□ -1.81
SMAD3-209ENST00000558894 TRAV4A0A0B4J268 109 aa3.73□□□□□ -1.81
SMAD3-209ENST00000558894 XKRY2A2RUG3 117 aa3.73□□□□□ -1.81
SMAD3-209ENST00000558894 LRCOL1A6NCL2 159 aa3.73□□□□□ -1.81
SMAD3-209ENST00000558894 GGTLC3B5MD39 225 aa3.73□□□□□ -1.81
SMAD3-209ENST00000558894 F6UZH7 168 aa3.73□□□□□ -1.81
SMAD3-209ENST00000558894 IFNA5P01569 189 aa3.73□□□□□ -1.81
SMAD3-209ENST00000558894 TCRAP04437 139 aa3.73□□□□□ -1.81
SMAD3-209ENST00000558894 ARL14EPLP0DKL9 152 aa3.73□□□□□ -1.81
SMAD3-209ENST00000558894 GATA1P15976 413 aaPredicted RBP3.73□□□□□ -1.81
SMAD3-209ENST00000558894 CSN1S1P47710 185 aa3.73□□□□□ -1.81
SMAD3-209ENST00000558894 TAS2R45P59539 299 aa3.73□□□□□ -1.81
SMAD3-209ENST00000558894 KRTAP10-1P60331 282 aa3.73□□□□□ -1.81
SMAD3-209ENST00000558894 ZNF726P1Q15940 193 aa3.73□□□□□ -1.81
SMAD3-209ENST00000558894 C10orf91Q5T1B1 145 aa3.73□□□□□ -1.81
SMAD3-209ENST00000558894 FAM159AQ6UWV7 190 aa3.73□□□□□ -1.81
SMAD3-209ENST00000558894 PQLC2Q6ZP29 291 aa3.73□□□□□ -1.81
SMAD3-209ENST00000558894 GOLT1AQ6ZVE7 132 aa3.73□□□□□ -1.81
SMAD3-209ENST00000558894 TMEM75Q8N9X5 138 aa3.73□□□□□ -1.81
SMAD3-209ENST00000558894 OR10G9Q8NGN4 311 aa3.73□□□□□ -1.81
SMAD3-209ENST00000558894 OR10G7Q8NGN6 311 aa3.73□□□□□ -1.81
SMAD3-209ENST00000558894 SCGB1C1Q8TD33 95 aa3.73□□□□□ -1.81
SMAD3-209ENST00000558894 ASB13Q8WXK3 278 aa3.73□□□□□ -1.81
SMAD3-209ENST00000558894 SGK494Q96LW2 274 aa3.73□□□□□ -1.81
SMAD3-209ENST00000558894 C9orf85Q96MD7 179 aa3.73□□□□□ -1.81
SMAD3-209ENST00000558894 AQP10Q96PS8 301 aa3.73□□□□□ -1.81
SMAD3-209ENST00000558894 PSMG3Q9BT73 122 aaPredicted RBP3.73□□□□□ -1.81
SMAD3-209ENST00000558894 SCRT2Q9NQ03 307 aa3.73□□□□□ -1.81
SMAD3-209ENST00000558894 CARHSP1Q9Y2V2 147 aaKnown RBP3.73□□□□□ -1.81
SMAD3-209ENST00000558894 TRGV11A0A075B6L2 103 aa3.72□□□□□ -1.81
SMAD3-209ENST00000558894 TRAV21A0A0B4J279 112 aa3.72□□□□□ -1.81
SMAD3-209ENST00000558894 TRGV4A0A0C4DH28 118 aa3.72□□□□□ -1.81
SMAD3-209ENST00000558894 RNF222A6NCQ9 220 aa3.72□□□□□ -1.81
SMAD3-209ENST00000558894 PGPEP1LA6NFU8 196 aa3.72□□□□□ -1.81
SMAD3-209ENST00000558894 FAM74A7A6NL05 159 aa3.72□□□□□ -1.81
SMAD3-209ENST00000558894 M0R2P5 195 aa3.72□□□□□ -1.81
SMAD3-209ENST00000558894 RS1O15537 224 aa3.72□□□□□ -1.81
SMAD3-209ENST00000558894 APOC3P02656 99 aa3.72□□□□□ -1.81
SMAD3-209ENST00000558894 ORM1P02763 201 aa3.72□□□□□ -1.81
SMAD3-209ENST00000558894 PET100P0DJ07 73 aa3.72□□□□□ -1.81
SMAD3-209ENST00000558894 LINC00694P0DN24 101 aa3.72□□□□□ -1.81
SMAD3-209ENST00000558894 RNASE3P12724 160 aaKnown RBP3.72□□□□□ -1.81
SMAD3-209ENST00000558894 GYPEP15421 78 aa3.72□□□□□ -1.81
SMAD3-209ENST00000558894 ATP6V0CP27449 155 aa3.72□□□□□ -1.81
SMAD3-209ENST00000558894 G0S2P27469 103 aa3.72□□□□□ -1.81
SMAD3-209ENST00000558894 SRIP30626 198 aa3.72□□□□□ -1.81
SMAD3-209ENST00000558894 TIRAPP58753 221 aa3.72□□□□□ -1.81
SMAD3-209ENST00000558894 EIF5AP63241 154 aaKnown RBP3.72□□□□□ -1.81
SMAD3-209ENST00000558894 BLOC1S1P78537 153 aa3.72□□□□□ -1.81
SMAD3-209ENST00000558894 ACOT6Q3I5F7 207 aaPredicted RBP3.72□□□□□ -1.81
SMAD3-209ENST00000558894 FAM74A3Q4VXF1 159 aa3.72□□□□□ -1.81
SMAD3-209ENST00000558894 CFAP126Q5VTH2 177 aa3.72□□□□□ -1.81
SMAD3-209ENST00000558894 Q6ZSN1 163 aa3.72□□□□□ -1.81
SMAD3-209ENST00000558894 SLC25A29Q8N8R3 303 aa3.72□□□□□ -1.81
SMAD3-209ENST00000558894 HSD17B11Q8NBQ5 300 aa3.72□□□□□ -1.81
SMAD3-209ENST00000558894 NUDT10Q8NFP7 164 aa3.72□□□□□ -1.81
SMAD3-209ENST00000558894 OR4C5Q8NGB2 326 aa3.72□□□□□ -1.81
SMAD3-209ENST00000558894 PTH2Q96A98 100 aa3.72□□□□□ -1.81
SMAD3-209ENST00000558894 MED28Q9H204 178 aa3.72□□□□□ -1.81
SMAD3-209ENST00000558894 SH3BGRL3Q9H299 93 aa3.72□□□□□ -1.81
SMAD3-209ENST00000558894 Q9UF83 564 aa3.72□□□□□ -1.81
SMAD3-209ENST00000558894 RPH3ALQ9UNE2 315 aa3.72□□□□□ -1.81
SMAD3-209ENST00000558894 LY96Q9Y6Y9 160 aa3.72□□□□□ -1.81
SMAD3-209ENST00000558894 FAT4Q6V0I7 4981 aa3.72□□□□□ -1.81
SMAD3-209ENST00000558894 IGKV3D-20A0A0C4DH25 116 aa3.71□□□□□ -1.82
SMAD3-209ENST00000558894 A0A1W2PPV4 95 aa3.71□□□□□ -1.82
SMAD3-209ENST00000558894 ZNF561-AS1K7EIQ3 104 aa3.71□□□□□ -1.82
SMAD3-209ENST00000558894 K7EP13 123 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms