RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 ZC2HC1AQ96GY0 325 aa8.53□□□□□ -1.04
SMAD3-208ENST00000558827 C9orf85Q96MD7 179 aa8.53□□□□□ -1.04
SMAD3-208ENST00000558827 JPT2Q9H910 190 aa8.53□□□□□ -1.04
SMAD3-208ENST00000558827 A0A1W2PPQ1 181 aa8.52□□□□□ -1.05
SMAD3-208ENST00000558827 KANTRA0A1W2PQU2 76 aa8.52□□□□□ -1.05
SMAD3-208ENST00000558827 FABP5P3A8MUU1 101 aa8.52□□□□□ -1.05
SMAD3-208ENST00000558827 Q6ZSN1 163 aa8.52□□□□□ -1.05
SMAD3-208ENST00000558827 STOML3Q8TAV4 291 aa8.52□□□□□ -1.05
SMAD3-208ENST00000558827 B4DEV8 164 aa8.51□□□□□ -1.05
SMAD3-208ENST00000558827 H3BVH4 76 aa8.51□□□□□ -1.05
SMAD3-208ENST00000558827 BCL2L11O43521 198 aa8.51□□□□□ -1.05
SMAD3-208ENST00000558827 SH2D1AO60880 128 aa8.51□□□□□ -1.05
SMAD3-208ENST00000558827 UBE2G1P62253 170 aa8.51□□□□□ -1.05
SMAD3-208ENST00000558827 TMUB2Q71RG4 321 aa8.51□□□□□ -1.05
SMAD3-208ENST00000558827 HIST1H2BAQ96A08 127 aa8.51□□□□□ -1.05
SMAD3-208ENST00000558827 TXNDC17Q9BRA2 123 aa8.51□□□□□ -1.05
SMAD3-208ENST00000558827 SAMD10Q9BYL1 202 aa8.51□□□□□ -1.05
SMAD3-208ENST00000558827 DNAH5Q8TE73 4624 aa8.5□□□□□ -1.05
SMAD3-208ENST00000558827 A0A0D9SG52 128 aa8.5□□□□□ -1.05
SMAD3-208ENST00000558827 HMSDA8MTL9 139 aa8.5□□□□□ -1.05
SMAD3-208ENST00000558827 PFDN1O60925 122 aa8.5□□□□□ -1.05
SMAD3-208ENST00000558827 ASIPP42127 132 aa8.5□□□□□ -1.05
SMAD3-208ENST00000558827 AKR1C3P42330 323 aa8.5□□□□□ -1.05
SMAD3-208ENST00000558827 Q6ZRN7 208 aaPredicted RBP8.5□□□□□ -1.05
SMAD3-208ENST00000558827 AKAP14Q86UN6 197 aa8.5□□□□□ -1.05
SMAD3-208ENST00000558827 Q9UF83 564 aa8.5□□□□□ -1.05
SMAD3-208ENST00000558827 LY96Q9Y6Y9 160 aa8.5□□□□□ -1.05
SMAD3-208ENST00000558827 SCO2A0A1W2PP80 73 aa8.49□□□□□ -1.05
SMAD3-208ENST00000558827 GAGE12JA6NER3 117 aa8.49□□□□□ -1.05
SMAD3-208ENST00000558827 KRBOX1C9JBD0 128 aa8.49□□□□□ -1.05
SMAD3-208ENST00000558827 ARMS2P0C7Q2 107 aa8.49□□□□□ -1.05
SMAD3-208ENST00000558827 SEC11BP0C7V7 166 aa8.49□□□□□ -1.05
SMAD3-208ENST00000558827 DNAH10OSP0CZ25 163 aa8.49□□□□□ -1.05
SMAD3-208ENST00000558827 GAGE1Q13065 139 aa8.49□□□□□ -1.05
SMAD3-208ENST00000558827 GAGE4Q13068 117 aa8.49□□□□□ -1.05
SMAD3-208ENST00000558827 GAGE5Q13069 117 aa8.49□□□□□ -1.05
SMAD3-208ENST00000558827 ZNF345Q14585 488 aa8.49□□□□□ -1.05
SMAD3-208ENST00000558827 GAGE13Q4V321 117 aa8.49□□□□□ -1.05
SMAD3-208ENST00000558827 DMRTA1Q5VZB9 504 aa8.49□□□□□ -1.05
SMAD3-208ENST00000558827 MBD3L1Q8WWY6 194 aa8.49□□□□□ -1.05
SMAD3-208ENST00000558827 PRADC1Q9BSG0 188 aa8.49□□□□□ -1.05
SMAD3-208ENST00000558827 KRTAP4-5Q9BYR2 181 aa8.49□□□□□ -1.05
SMAD3-208ENST00000558827 NKX6-2Q9C056 277 aaPredicted RBP8.49□□□□□ -1.05
SMAD3-208ENST00000558827 HSPG2P98160 4391 aa8.49□□□□□ -1.05
SMAD3-208ENST00000558827 IGHV3-30P01768 117 aa8.48□□□□□ -1.05
SMAD3-208ENST00000558827 IGHV3-33P01772 117 aa8.48□□□□□ -1.05
SMAD3-208ENST00000558827 CRYGDP07320 174 aa8.48□□□□□ -1.05
SMAD3-208ENST00000558827 IGHV3-30-3P0DP02 117 aa8.48□□□□□ -1.05
SMAD3-208ENST00000558827 IGHV3-30-5P0DP03 117 aa8.48□□□□□ -1.05
SMAD3-208ENST00000558827 EVI2AP22794 236 aa8.48□□□□□ -1.05
SMAD3-208ENST00000558827 SSTP61278 116 aa8.48□□□□□ -1.05
SMAD3-208ENST00000558827 CCL20P78556 96 aa8.48□□□□□ -1.05
SMAD3-208ENST00000558827 RHOHQ15669 191 aa8.48□□□□□ -1.05
SMAD3-208ENST00000558827 OR10J3Q5JRS4 329 aa8.48□□□□□ -1.05
SMAD3-208ENST00000558827 C14orf178Q8N769 122 aaPredicted RBP8.48□□□□□ -1.05
SMAD3-208ENST00000558827 FMC1Q96HJ9 113 aa8.48□□□□□ -1.05
SMAD3-208ENST00000558827 PARLQ9H300 379 aa8.48□□□□□ -1.05
SMAD3-208ENST00000558827 ZFP30Q9Y2G7 519 aa8.48□□□□□ -1.05
SMAD3-208ENST00000558827 TRAV9-2A0A087WT02 112 aa8.47□□□□□ -1.05
SMAD3-208ENST00000558827 A0A087WWL8 130 aa8.47□□□□□ -1.05
SMAD3-208ENST00000558827 MUC21A0A0G2JKD1 596 aa8.47□□□□□ -1.05
SMAD3-208ENST00000558827 MUC21A0A140T8X8 626 aa8.47□□□□□ -1.05
SMAD3-208ENST00000558827 M0R381 172 aa8.47□□□□□ -1.05
SMAD3-208ENST00000558827 H2AFB1P0C5Y9 115 aa8.47□□□□□ -1.05
SMAD3-208ENST00000558827 RPL19P84098 196 aaKnown RBP8.47□□□□□ -1.05
SMAD3-208ENST00000558827 FAM162BQ5T6X4 162 aa8.47□□□□□ -1.05
SMAD3-208ENST00000558827 FAM74A4Q5TZK3 123 aa8.47□□□□□ -1.05
SMAD3-208ENST00000558827 TCTE3Q8IZS6 198 aa8.47□□□□□ -1.05
SMAD3-208ENST00000558827 MSRB1Q9NZV6 116 aa8.47□□□□□ -1.05
SMAD3-208ENST00000558827 APOBP04114 4563 aaKnown RBP8.47□□□□□ -1.05
SMAD3-208ENST00000558827 TRBV6-4A0A1B0GX49 114 aa8.46□□□□□ -1.06
SMAD3-208ENST00000558827 UMAD1C9J7I0 102 aa8.46□□□□□ -1.06
SMAD3-208ENST00000558827 LTAP01374 205 aa8.46□□□□□ -1.06
SMAD3-208ENST00000558827 Q8N3U1 123 aa8.46□□□□□ -1.06
SMAD3-208ENST00000558827 ATP6V0E2Q8NHE4 81 aa8.46□□□□□ -1.06
SMAD3-208ENST00000558827 Q9HAA7 133 aa8.46□□□□□ -1.06
SMAD3-208ENST00000558827 TRAV8-6A0A0B4J262 113 aa8.45□□□□□ -1.06
SMAD3-208ENST00000558827 IGHV3-38A0A0C4DH36 116 aa8.45□□□□□ -1.06
SMAD3-208ENST00000558827 A0A1B0GVG6 124 aa8.45□□□□□ -1.06
SMAD3-208ENST00000558827 A8MWV9 139 aa8.45□□□□□ -1.06
SMAD3-208ENST00000558827 MGST1P10620 155 aaKnown RBP8.45□□□□□ -1.06
SMAD3-208ENST00000558827 TPT1P13693 172 aaKnown RBP8.45□□□□□ -1.06
SMAD3-208ENST00000558827 BTF3P20290 206 aaKnown RBP8.45□□□□□ -1.06
SMAD3-208ENST00000558827 ZNF674Q2M3X9 581 aa8.45□□□□□ -1.06
SMAD3-208ENST00000558827 PRR27Q6MZM9 219 aa8.45□□□□□ -1.06
SMAD3-208ENST00000558827 BAGE2Q86Y30 109 aa8.45□□□□□ -1.06
SMAD3-208ENST00000558827 PTH2Q96A98 100 aa8.45□□□□□ -1.06
SMAD3-208ENST00000558827 IL36BQ9NZH7 164 aa8.45□□□□□ -1.06
SMAD3-208ENST00000558827 GNG13Q9P2W3 67 aa8.45□□□□□ -1.06
SMAD3-208ENST00000558827 PHLDA3Q9Y5J5 127 aa8.45□□□□□ -1.06
SMAD3-208ENST00000558827 PCLOQ9Y6V0 5065 aa8.45□□□□□ -1.06
SMAD3-208ENST00000558827 ABCA13Q86UQ4 5058 aa8.44□□□□□ -1.06
SMAD3-208ENST00000558827 TRBV6-1A0A0K0K1D8 114 aa8.44□□□□□ -1.06
SMAD3-208ENST00000558827 ERVFC1-1P60608 527 aa8.44□□□□□ -1.06
SMAD3-208ENST00000558827 EIF5AP63241 154 aaKnown RBP8.44□□□□□ -1.06
SMAD3-208ENST00000558827 SH2D6Q7Z4S9 175 aa8.44□□□□□ -1.06
SMAD3-208ENST00000558827 SYT8Q8NBV8 401 aa8.44□□□□□ -1.06
SMAD3-208ENST00000558827 A0A087WTM6 91 aa8.43□□□□□ -1.06
SMAD3-208ENST00000558827 EREGO14944 169 aa8.43□□□□□ -1.06
SMAD3-208ENST00000558827 C1QBP02746 253 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms