RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 G3V3Q6 166 aa6.92□□□□□ -1.3
USP3-207ENST00000558218 NXPH4O95158 308 aa6.92□□□□□ -1.3
USP3-207ENST00000558218 GCGP01275 180 aa6.92□□□□□ -1.3
USP3-207ENST00000558218 FHITP49789 147 aa6.92□□□□□ -1.3
USP3-207ENST00000558218 ZNF345Q14585 488 aa6.92□□□□□ -1.3
USP3-207ENST00000558218 ZNF726P1Q15940 193 aa6.92□□□□□ -1.3
USP3-207ENST00000558218 COX8CQ7Z4L0 72 aa6.92□□□□□ -1.3
USP3-207ENST00000558218 PRNTQ86SH4 94 aa6.92□□□□□ -1.3
USP3-207ENST00000558218 NFE4Q86UQ8 179 aa6.92□□□□□ -1.3
USP3-207ENST00000558218 STOML3Q8TAV4 291 aa6.92□□□□□ -1.3
USP3-207ENST00000558218 SGK494Q96LW2 274 aa6.92□□□□□ -1.3
USP3-207ENST00000558218 KRTAP4-11Q9BYQ6 195 aa6.92□□□□□ -1.3
USP3-207ENST00000558218 KRTAP1-5Q9BYS1 174 aa6.92□□□□□ -1.3
USP3-207ENST00000558218 CYTL1Q9NRR1 136 aa6.92□□□□□ -1.3
USP3-207ENST00000558218 ZFP30Q9Y2G7 519 aa6.92□□□□□ -1.3
USP3-207ENST00000558218 TRBV6-4A0A1B0GX49 114 aa6.91□□□□□ -1.3
USP3-207ENST00000558218 HMSDA8MTL9 139 aa6.91□□□□□ -1.3
USP3-207ENST00000558218 ARPC5O15511 151 aa6.91□□□□□ -1.3
USP3-207ENST00000558218 IFNA7P01567 189 aa6.91□□□□□ -1.3
USP3-207ENST00000558218 SFTA3P0C7M3 94 aa6.91□□□□□ -1.3
USP3-207ENST00000558218 GYPEP15421 78 aa6.91□□□□□ -1.3
USP3-207ENST00000558218 ZNF80P51504 273 aaPredicted RBP6.91□□□□□ -1.3
USP3-207ENST00000558218 ZNF876PQ49A33 203 aa6.91□□□□□ -1.3
USP3-207ENST00000558218 C9orf85Q96MD7 179 aa6.91□□□□□ -1.3
USP3-207ENST00000558218 ARL2-SNX15V9GYD0 113 aa6.91□□□□□ -1.3
USP3-207ENST00000558218 A0A0D9SG52 128 aa6.9□□□□□ -1.3
USP3-207ENST00000558218 TRBV6-1A0A0K0K1D8 114 aa6.9□□□□□ -1.3
USP3-207ENST00000558218 FAM74A7A6NL05 159 aa6.9□□□□□ -1.3
USP3-207ENST00000558218 C16orf90A8MZG2 172 aa6.9□□□□□ -1.3
USP3-207ENST00000558218 UMAD1C9J7I0 102 aa6.9□□□□□ -1.3
USP3-207ENST00000558218 RS1O15537 224 aa6.9□□□□□ -1.3
USP3-207ENST00000558218 CDK2AP2O75956 126 aa6.9□□□□□ -1.3
USP3-207ENST00000558218 SEC11BP0C7V7 166 aa6.9□□□□□ -1.3
USP3-207ENST00000558218 DNAH10OSP0CZ25 163 aa6.9□□□□□ -1.3
USP3-207ENST00000558218 GATA1P15976 413 aaPredicted RBP6.9□□□□□ -1.3
USP3-207ENST00000558218 EVI2AP22794 236 aa6.9□□□□□ -1.3
USP3-207ENST00000558218 DNLZQ5SXM8 178 aa6.9□□□□□ -1.3
USP3-207ENST00000558218 KCNRGQ8N5I3 272 aa6.9□□□□□ -1.3
USP3-207ENST00000558218 PRADC1Q9BSG0 188 aa6.9□□□□□ -1.3
USP3-207ENST00000558218 C11orf21Q9P2W6 132 aa6.9□□□□□ -1.3
USP3-207ENST00000558218 LY96Q9Y6Y9 160 aa6.9□□□□□ -1.3
USP3-207ENST00000558218 FAT2Q9NYQ8 4349 aa6.9□□□□□ -1.31
USP3-207ENST00000558218 MAP1LC3B2A6NCE7 125 aa6.89□□□□□ -1.31
USP3-207ENST00000558218 A8MWV9 139 aa6.89□□□□□ -1.31
USP3-207ENST00000558218 PEX7O00628 323 aa6.89□□□□□ -1.31
USP3-207ENST00000558218 MGST1P10620 155 aaKnown RBP6.89□□□□□ -1.31
USP3-207ENST00000558218 RNASE3P12724 160 aaKnown RBP6.89□□□□□ -1.31
USP3-207ENST00000558218 LINC00315P59091 139 aa6.89□□□□□ -1.31
USP3-207ENST00000558218 EIF5AP63241 154 aaKnown RBP6.89□□□□□ -1.31
USP3-207ENST00000558218 CFAP126Q5VTH2 177 aa6.89□□□□□ -1.31
USP3-207ENST00000558218 DPPA3Q6W0C5 159 aa6.89□□□□□ -1.31
USP3-207ENST00000558218 ZFP2Q6ZN57 461 aa6.89□□□□□ -1.31
USP3-207ENST00000558218 Q6ZRN7 208 aaPredicted RBP6.89□□□□□ -1.31
USP3-207ENST00000558218 C10orf126Q8N4M7 172 aa6.89□□□□□ -1.31
USP3-207ENST00000558218 FMC1Q96HJ9 113 aa6.89□□□□□ -1.31
USP3-207ENST00000558218 MAP1LC3BQ9GZQ8 125 aa6.89□□□□□ -1.31
USP3-207ENST00000558218 DNAH2Q9P225 4427 aa6.88□□□□□ -1.31
USP3-207ENST00000558218 IGKV3D-20A0A0C4DH25 116 aa6.88□□□□□ -1.31
USP3-207ENST00000558218 S100A9P06702 114 aaKnown RBP6.88□□□□□ -1.31
USP3-207ENST00000558218 RHOHQ15669 191 aa6.88□□□□□ -1.31
USP3-207ENST00000558218 LGALSLQ3ZCW2 172 aaPredicted RBP6.88□□□□□ -1.31
USP3-207ENST00000558218 ZNF575Q86XF7 245 aa6.88□□□□□ -1.31
USP3-207ENST00000558218 SLC25A29Q8N8R3 303 aa6.88□□□□□ -1.31
USP3-207ENST00000558218 MBD3L1Q8WWY6 194 aa6.88□□□□□ -1.31
USP3-207ENST00000558218 LINC00479Q96M42 142 aa6.88□□□□□ -1.31
USP3-207ENST00000558218 IL36BQ9NZH7 164 aa6.88□□□□□ -1.31
USP3-207ENST00000558218 HERC2O95714 4834 aa6.88□□□□□ -1.31
USP3-207ENST00000558218 TRAV34A0A0B4J273 112 aa6.87□□□□□ -1.31
USP3-207ENST00000558218 PGPEP1LA6NFU8 196 aa6.87□□□□□ -1.31
USP3-207ENST00000558218 S100A4P26447 101 aaKnown RBP6.87□□□□□ -1.31
USP3-207ENST00000558218 ASIPP42127 132 aa6.87□□□□□ -1.31
USP3-207ENST00000558218 FGF8P55075 233 aaPredicted RBP6.87□□□□□ -1.31
USP3-207ENST00000558218 UBE2G2P60604 165 aa6.87□□□□□ -1.31
USP3-207ENST00000558218 ZNF506Q5JVG8 444 aa6.87□□□□□ -1.31
USP3-207ENST00000558218 SPATA12Q7Z6I5 190 aa6.87□□□□□ -1.31
USP3-207ENST00000558218 TRAV8-6A0A0B4J262 113 aa6.86□□□□□ -1.31
USP3-207ENST00000558218 KANTRA0A1W2PQU2 76 aa6.86□□□□□ -1.31
USP3-207ENST00000558218 UBE2G1P62253 170 aa6.86□□□□□ -1.31
USP3-207ENST00000558218 ZNF674Q2M3X9 581 aa6.86□□□□□ -1.31
USP3-207ENST00000558218 FAM162BQ5T6X4 162 aa6.86□□□□□ -1.31
USP3-207ENST00000558218 Q86TA4 180 aa6.86□□□□□ -1.31
USP3-207ENST00000558218 NHLRC2Q8NBF2 726 aa6.86□□□□□ -1.31
USP3-207ENST00000558218 SFT2D1Q8WV19 159 aa6.86□□□□□ -1.31
USP3-207ENST00000558218 MSRB1Q9NZV6 116 aa6.86□□□□□ -1.31
USP3-207ENST00000558218 PKD1P98161 4303 aa6.86□□□□□ -1.31
USP3-207ENST00000558218 IGHV3-38A0A0C4DH36 116 aa6.85□□□□□ -1.31
USP3-207ENST00000558218 B4DEV8 164 aa6.85□□□□□ -1.31
USP3-207ENST00000558218 KRBOX1C9JBD0 128 aa6.85□□□□□ -1.31
USP3-207ENST00000558218 LTAP01374 205 aa6.85□□□□□ -1.31
USP3-207ENST00000558218 CRIP1P50238 77 aa6.85□□□□□ -1.31
USP3-207ENST00000558218 ERVFC1-1P60608 527 aa6.85□□□□□ -1.31
USP3-207ENST00000558218 LINC01556Q5JQF7 62 aa6.85□□□□□ -1.31
USP3-207ENST00000558218 CST9LP1Q5W188 147 aa6.85□□□□□ -1.31
USP3-207ENST00000558218 WFDC10BQ8IUB3 73 aa6.85□□□□□ -1.31
USP3-207ENST00000558218 KRTAP4-5Q9BYR2 181 aa6.85□□□□□ -1.31
USP3-207ENST00000558218 GTSF1LQ9H1H1 148 aa6.85□□□□□ -1.31
USP3-207ENST00000558218 KIAA1109Q2LD37 5005 aa6.85□□□□□ -1.31
USP3-207ENST00000558218 PKHD1P08F94 4074 aa6.84□□□□□ -1.31
USP3-207ENST00000558218 LOC100131303A0A0U1RQF7 123 aa6.84□□□□□ -1.31
USP3-207ENST00000558218 SMLR1H3BR10 107 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms