RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 ZNF493Q6ZR52 646 aa11.82□□□□□ -0.52
PCNX4-213ENST00000556907 NUP35Q8NFH5 326 aa11.82□□□□□ -0.52
PCNX4-213ENST00000556907 NACAE9PAV3 2078 aa11.82□□□□□ -0.52
PCNX4-213ENST00000556907 TEX48A0A1B0GUV7 120 aa11.81□□□□□ -0.52
PCNX4-213ENST00000556907 GRIFINA4D1Z8 144 aa11.81□□□□□ -0.52
PCNX4-213ENST00000556907 SNAI2O43623 268 aa11.81□□□□□ -0.52
PCNX4-213ENST00000556907 ASIPP42127 132 aa11.81□□□□□ -0.52
PCNX4-213ENST00000556907 FAM3BP58499 235 aaPredicted RBP11.81□□□□□ -0.52
PCNX4-213ENST00000556907 FER1L6-AS1Q8NA97 138 aa11.81□□□□□ -0.52
PCNX4-213ENST00000556907 OR5AL1P0C617 328 aa11.8□□□□□ -0.52
PCNX4-213ENST00000556907 CNFNQ9BYD5 112 aa11.8□□□□□ -0.52
PCNX4-213ENST00000556907 TGIF2-C20orf24A0A0A6YYL0 155 aa11.79□□□□□ -0.52
PCNX4-213ENST00000556907 IGHV3-16A0A0C4DH30 117 aa11.79□□□□□ -0.52
PCNX4-213ENST00000556907 H3BVH4 76 aa11.79□□□□□ -0.52
PCNX4-213ENST00000556907 RNASE3P12724 160 aaKnown RBP11.79□□□□□ -0.52
PCNX4-213ENST00000556907 ATP5L2Q7Z4Y8 100 aa11.79□□□□□ -0.52
PCNX4-213ENST00000556907 C16orf74Q96GX8 76 aa11.79□□□□□ -0.52
PCNX4-213ENST00000556907 SSBP4Q9BWG4 385 aaPredicted RBP11.79□□□□□ -0.52
PCNX4-213ENST00000556907 CBY3A6NI87 242 aa11.78□□□□□ -0.52
PCNX4-213ENST00000556907 COLCA2A8K830 154 aa11.78□□□□□ -0.52
PCNX4-213ENST00000556907 F2Z2F3 143 aa11.78□□□□□ -0.52
PCNX4-213ENST00000556907 LYZL1Q6UWQ5 148 aa11.78□□□□□ -0.52
PCNX4-213ENST00000556907 C11orf45Q8TAV5 145 aa11.78□□□□□ -0.52
PCNX4-213ENST00000556907 MUC7Q8TAX7 377 aa11.78□□□□□ -0.52
PCNX4-213ENST00000556907 TMEM263Q8WUH6 116 aaKnown RBP11.78□□□□□ -0.52
PCNX4-213ENST00000556907 PGLYRP4Q96LB8 373 aa11.78□□□□□ -0.52
PCNX4-213ENST00000556907 C9orf85Q96MD7 179 aa11.78□□□□□ -0.52
PCNX4-213ENST00000556907 SCRT2Q9NQ03 307 aa11.78□□□□□ -0.52
PCNX4-213ENST00000556907 A0A1B0GXF2 115 aa11.77□□□□□ -0.53
PCNX4-213ENST00000556907 C3orf84H3BNL1 204 aa11.77□□□□□ -0.53
PCNX4-213ENST00000556907 GNRH2O43555 120 aa11.77□□□□□ -0.53
PCNX4-213ENST00000556907 SPART-AS1P0CW21 52 aa11.77□□□□□ -0.53
PCNX4-213ENST00000556907 S100A4P26447 101 aaKnown RBP11.77□□□□□ -0.53
PCNX4-213ENST00000556907 ZNF415Q09FC8 603 aa11.77□□□□□ -0.53
PCNX4-213ENST00000556907 RASL11AQ6T310 242 aa11.77□□□□□ -0.53
PCNX4-213ENST00000556907 BORCS7Q96B45 105 aa11.77□□□□□ -0.53
PCNX4-213ENST00000556907 TP53TG3Q9ULZ0 132 aa11.77□□□□□ -0.53
PCNX4-213ENST00000556907 A0A1B0GUT8 65 aa11.76□□□□□ -0.53
PCNX4-213ENST00000556907 DEFB4AO15263 64 aa11.76□□□□□ -0.53
PCNX4-213ENST00000556907 NXPH4O95158 308 aa11.76□□□□□ -0.53
PCNX4-213ENST00000556907 ARMS2P0C7Q2 107 aa11.76□□□□□ -0.53
PCNX4-213ENST00000556907 HTN1P15515 57 aa11.76□□□□□ -0.53
PCNX4-213ENST00000556907 CACNG7P62955 275 aa11.76□□□□□ -0.53
PCNX4-213ENST00000556907 WDR73Q6P4I2 378 aa11.76□□□□□ -0.53
PCNX4-213ENST00000556907 RNASE8Q8TDE3 154 aaKnown RBP11.76□□□□□ -0.53
PCNX4-213ENST00000556907 FAM210BQ96KR6 192 aa11.76□□□□□ -0.53
PCNX4-213ENST00000556907 TPPP3Q9BW30 176 aa11.76□□□□□ -0.53
PCNX4-213ENST00000556907 IGHV4-4A0A075B6R2 117 aa11.75□□□□□ -0.53
PCNX4-213ENST00000556907 A0A1B0GW15 77 aa11.75□□□□□ -0.53
PCNX4-213ENST00000556907 LYRM9A8MSI8 78 aa11.75□□□□□ -0.53
PCNX4-213ENST00000556907 HBBP68871 147 aa11.75□□□□□ -0.53
PCNX4-213ENST00000556907 RIGQ13278 110 aa11.75□□□□□ -0.53
PCNX4-213ENST00000556907 COX19Q49B96 90 aa11.75□□□□□ -0.53
PCNX4-213ENST00000556907 MRPL54Q6P161 138 aaKnown RBP11.75□□□□□ -0.53
PCNX4-213ENST00000556907 GATD1Q8NB37 220 aa11.75□□□□□ -0.53
PCNX4-213ENST00000556907 C11orf72Q8NBR9 251 aa11.75□□□□□ -0.53
PCNX4-213ENST00000556907 TIMM8BQ9Y5J9 83 aaPredicted RBP11.75□□□□□ -0.53
PCNX4-213ENST00000556907 AZU1P20160 251 aa11.74□□□□□ -0.53
PCNX4-213ENST00000556907 OR10AG1Q8NH19 301 aa11.74□□□□□ -0.53
PCNX4-213ENST00000556907 MDFICQ9P1T7 246 aa11.74□□□□□ -0.53
PCNX4-213ENST00000556907 DKK2Q9UBU2 259 aa11.74□□□□□ -0.53
PCNX4-213ENST00000556907 SNURFLB1AK76 121 aa11.73□□□□□ -0.53
PCNX4-213ENST00000556907 SPINK4O60575 86 aa11.73□□□□□ -0.53
PCNX4-213ENST00000556907 S100A8P05109 93 aa11.73□□□□□ -0.53
PCNX4-213ENST00000556907 RAB5AP20339 215 aa11.73□□□□□ -0.53
PCNX4-213ENST00000556907 EMP1P54849 157 aa11.73□□□□□ -0.53
PCNX4-213ENST00000556907 DAZ2Q13117 558 aaKnown RBP11.72□□□□□ -0.53
PCNX4-213ENST00000556907 FAM222AQ5U5X8 452 aa11.72□□□□□ -0.53
PCNX4-213ENST00000556907 ZFP82Q8N141 532 aa11.72□□□□□ -0.53
PCNX4-213ENST00000556907 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.72□□□□□ -0.53
PCNX4-213ENST00000556907 PTH2Q96A98 100 aa11.72□□□□□ -0.53
PCNX4-213ENST00000556907 PHLDA3Q9Y5J5 127 aa11.72□□□□□ -0.53
PCNX4-213ENST00000556907 PLAC8L1A1L4L8 177 aa11.71□□□□□ -0.53
PCNX4-213ENST00000556907 MT-ND6P03923 174 aa11.71□□□□□ -0.53
PCNX4-213ENST00000556907 PRM2P04554 102 aa11.71□□□□□ -0.53
PCNX4-213ENST00000556907 SPANXN1Q5VSR9 72 aa11.71□□□□□ -0.53
PCNX4-213ENST00000556907 SPXQ9BT56 116 aa11.71□□□□□ -0.53
PCNX4-213ENST00000556907 HLA-DQA1P01909 254 aa11.7□□□□□ -0.54
PCNX4-213ENST00000556907 PIK3CD-AS1Q5SR53 167 aa11.7□□□□□ -0.54
PCNX4-213ENST00000556907 TMEM136Q6ZRR5 245 aa11.7□□□□□ -0.54
PCNX4-213ENST00000556907 SYT8Q8NBV8 401 aa11.7□□□□□ -0.54
PCNX4-213ENST00000556907 GNB1LQ9BYB4 327 aa11.7□□□□□ -0.54
PCNX4-213ENST00000556907 MUC21A0A0G2JKD1 596 aa11.69□□□□□ -0.54
PCNX4-213ENST00000556907 MUC21A0A140T8X8 626 aa11.69□□□□□ -0.54
PCNX4-213ENST00000556907 NUPR2A6NF83 97 aa11.69□□□□□ -0.54
PCNX4-213ENST00000556907 TRGC1P0CF51 173 aa11.69□□□□□ -0.54
PCNX4-213ENST00000556907 NTF3P20783 257 aa11.69□□□□□ -0.54
PCNX4-213ENST00000556907 NANOS2P60321 138 aaKnown RBP11.69□□□□□ -0.54
PCNX4-213ENST00000556907 C12orf74Q32Q52 190 aa11.69□□□□□ -0.54
PCNX4-213ENST00000556907 AP1S3Q96PC3 154 aa11.69□□□□□ -0.54
PCNX4-213ENST00000556907 NDUFAF3Q9BU61 184 aa11.69□□□□□ -0.54
PCNX4-213ENST00000556907 GSN-AS1Q9NRJ2 163 aa11.69□□□□□ -0.54
PCNX4-213ENST00000556907 CELA1Q9UNI1 258 aa11.69□□□□□ -0.54
PCNX4-213ENST00000556907 M0R2P5 195 aa11.68□□□□□ -0.54
PCNX4-213ENST00000556907 M0R381 172 aa11.68□□□□□ -0.54
PCNX4-213ENST00000556907 RPS10P46783 165 aaKnown RBP11.68□□□□□ -0.54
PCNX4-213ENST00000556907 CAMPP49913 170 aa11.68□□□□□ -0.54
PCNX4-213ENST00000556907 DAD1P61803 113 aa11.68□□□□□ -0.54
PCNX4-213ENST00000556907 TWIST1Q15672 202 aa11.68□□□□□ -0.54
PCNX4-213ENST00000556907 LGALS9BQ3B8N2 356 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms