RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 DNAH10OSP0CZ25 163 aa9.37□□□□□ -0.91
PCNX4-209ENST00000555569 TIRAPP58753 221 aa9.37□□□□□ -0.91
PCNX4-209ENST00000555569 ERVFC1-1P60608 527 aa9.37□□□□□ -0.91
PCNX4-209ENST00000555569 SLC25A29Q8N8R3 303 aa9.37□□□□□ -0.91
PCNX4-209ENST00000555569 HIST1H2BAQ96A08 127 aa9.37□□□□□ -0.91
PCNX4-209ENST00000555569 PRADC1Q9BSG0 188 aa9.37□□□□□ -0.91
PCNX4-209ENST00000555569 MSRB1Q9NZV6 116 aa9.37□□□□□ -0.91
PCNX4-209ENST00000555569 RYR1P21817 5038 aa9.36□□□□□ -0.91
PCNX4-209ENST00000555569 IGHV3-73A0A0B4J1V6 119 aa9.36□□□□□ -0.91
PCNX4-209ENST00000555569 TRBV6-4A0A1B0GX49 114 aa9.36□□□□□ -0.91
PCNX4-209ENST00000555569 MAP1LC3B2A6NCE7 125 aa9.36□□□□□ -0.91
PCNX4-209ENST00000555569 FABP5P3A8MUU1 101 aa9.36□□□□□ -0.91
PCNX4-209ENST00000555569 RHOHQ15669 191 aa9.36□□□□□ -0.91
PCNX4-209ENST00000555569 Q86TA4 180 aa9.36□□□□□ -0.91
PCNX4-209ENST00000555569 KRTAP4-5Q9BYR2 181 aa9.36□□□□□ -0.91
PCNX4-209ENST00000555569 MAP1LC3BQ9GZQ8 125 aa9.36□□□□□ -0.91
PCNX4-209ENST00000555569 IGKV3D-20A0A0C4DH25 116 aa9.35□□□□□ -0.91
PCNX4-209ENST00000555569 SMLR1H3BR10 107 aa9.35□□□□□ -0.91
PCNX4-209ENST00000555569 CRYGDP07320 174 aa9.35□□□□□ -0.91
PCNX4-209ENST00000555569 S100A4P26447 101 aaKnown RBP9.35□□□□□ -0.91
PCNX4-209ENST00000555569 C10orf126Q8N4M7 172 aa9.35□□□□□ -0.91
PCNX4-209ENST00000555569 MGST1P10620 155 aaKnown RBP9.34□□□□□ -0.91
PCNX4-209ENST00000555569 ASIPP42127 132 aa9.34□□□□□ -0.91
PCNX4-209ENST00000555569 MAPKAPK5-AS1Q8N8E1 139 aa9.34□□□□□ -0.91
PCNX4-209ENST00000555569 STOML3Q8TAV4 291 aa9.34□□□□□ -0.91
PCNX4-209ENST00000555569 PGPEP1Q9NXJ5 209 aa9.34□□□□□ -0.91
PCNX4-209ENST00000555569 ZFP30Q9Y2G7 519 aa9.34□□□□□ -0.91
PCNX4-209ENST00000555569 TRAV8-6A0A0B4J262 113 aa9.33□□□□□ -0.92
PCNX4-209ENST00000555569 IGHV3-38A0A0C4DH36 116 aa9.33□□□□□ -0.92
PCNX4-209ENST00000555569 B4DEV8 164 aa9.33□□□□□ -0.92
PCNX4-209ENST00000555569 LGALSLQ3ZCW2 172 aaPredicted RBP9.33□□□□□ -0.92
PCNX4-209ENST00000555569 PIK3CD-AS1Q5SR53 167 aa9.33□□□□□ -0.92
PCNX4-209ENST00000555569 KCNRGQ8N5I3 272 aa9.33□□□□□ -0.92
PCNX4-209ENST00000555569 ZC2HC1AQ96GY0 325 aa9.33□□□□□ -0.92
PCNX4-209ENST00000555569 PARLQ9H300 379 aa9.33□□□□□ -0.92
PCNX4-209ENST00000555569 A0A087WTM6 91 aa9.32□□□□□ -0.92
PCNX4-209ENST00000555569 A8MWV9 139 aa9.32□□□□□ -0.92
PCNX4-209ENST00000555569 H3BVH4 76 aa9.32□□□□□ -0.92
PCNX4-209ENST00000555569 FHITP49789 147 aa9.32□□□□□ -0.92
PCNX4-209ENST00000555569 CRIP1P50238 77 aa9.32□□□□□ -0.92
PCNX4-209ENST00000555569 UBE2G1P62253 170 aa9.32□□□□□ -0.92
PCNX4-209ENST00000555569 ZNF345Q14585 488 aa9.32□□□□□ -0.92
PCNX4-209ENST00000555569 LINC01556Q5JQF7 62 aa9.32□□□□□ -0.92
PCNX4-209ENST00000555569 OR10J3Q5JRS4 329 aa9.32□□□□□ -0.92
PCNX4-209ENST00000555569 CST9LP1Q5W188 147 aa9.32□□□□□ -0.92
PCNX4-209ENST00000555569 CDPF1Q6NVV7 123 aa9.32□□□□□ -0.92
PCNX4-209ENST00000555569 ZFP2Q6ZN57 461 aa9.32□□□□□ -0.92
PCNX4-209ENST00000555569 COX8CQ7Z4L0 72 aa9.32□□□□□ -0.92
PCNX4-209ENST00000555569 FMC1Q96HJ9 113 aa9.32□□□□□ -0.92
PCNX4-209ENST00000555569 TCEAL7Q9BRU2 100 aa9.32□□□□□ -0.92
PCNX4-209ENST00000555569 IL36BQ9NZH7 164 aa9.32□□□□□ -0.92
PCNX4-209ENST00000555569 DNAH5Q8TE73 4624 aa9.32□□□□□ -0.92
PCNX4-209ENST00000555569 TRBV6-1A0A0K0K1D8 114 aa9.31□□□□□ -0.92
PCNX4-209ENST00000555569 KRBOX1C9JBD0 128 aa9.31□□□□□ -0.92
PCNX4-209ENST00000555569 M0R036 132 aa9.31□□□□□ -0.92
PCNX4-209ENST00000555569 SH2D1AO60880 128 aa9.31□□□□□ -0.92
PCNX4-209ENST00000555569 FUSP35637 526 aaKnown RBP eCLIP9.31□□□□□ -0.92
PCNX4-209ENST00000555569 DNLZQ5SXM8 178 aa9.31□□□□□ -0.92
PCNX4-209ENST00000555569 FAM162BQ5T6X4 162 aa9.31□□□□□ -0.92
PCNX4-209ENST00000555569 LELP1Q5T871 98 aa9.31□□□□□ -0.92
PCNX4-209ENST00000555569 Q6ZSN1 163 aa9.31□□□□□ -0.92
PCNX4-209ENST00000555569 ATP6V0E2Q8NHE4 81 aa9.31□□□□□ -0.92
PCNX4-209ENST00000555569 GTSF1LQ9H1H1 148 aa9.31□□□□□ -0.92
PCNX4-209ENST00000555569 APOBP04114 4563 aaKnown RBP9.31□□□□□ -0.92
PCNX4-209ENST00000555569 PCLOQ9Y6V0 5065 aa9.31□□□□□ -0.92
PCNX4-209ENST00000555569 HMSDA8MTL9 139 aa9.3□□□□□ -0.92
PCNX4-209ENST00000555569 SEC11BP0C7V7 166 aa9.3□□□□□ -0.92
PCNX4-209ENST00000555569 AKR1C3P42330 323 aa9.3□□□□□ -0.92
PCNX4-209ENST00000555569 OR11H4Q8NGC9 324 aa9.3□□□□□ -0.92
PCNX4-209ENST00000555569 JPT2Q9H910 190 aa9.3□□□□□ -0.92
PCNX4-209ENST00000555569 A0A0D9SG52 128 aa9.29□□□□□ -0.92
PCNX4-209ENST00000555569 GRIFINA4D1Z8 144 aa9.29□□□□□ -0.92
PCNX4-209ENST00000555569 IBA57-AS1B1ANH7 110 aa9.29□□□□□ -0.92
PCNX4-209ENST00000555569 UMAD1C9J7I0 102 aa9.29□□□□□ -0.92
PCNX4-209ENST00000555569 PAGE4O60829 102 aa9.29□□□□□ -0.92
PCNX4-209ENST00000555569 LTAP01374 205 aa9.29□□□□□ -0.92
PCNX4-209ENST00000555569 ARMS2P0C7Q2 107 aa9.29□□□□□ -0.92
PCNX4-209ENST00000555569 ZNF674Q2M3X9 581 aa9.29□□□□□ -0.92
PCNX4-209ENST00000555569 Q8N1X5 172 aa9.29□□□□□ -0.92
PCNX4-209ENST00000555569 SYT8Q8NBV8 401 aa9.29□□□□□ -0.92
PCNX4-209ENST00000555569 FAM213BQ8TBF2 198 aa9.29□□□□□ -0.92
PCNX4-209ENST00000555569 SFT2D1Q8WV19 159 aa9.29□□□□□ -0.92
PCNX4-209ENST00000555569 MBD3L1Q8WWY6 194 aa9.29□□□□□ -0.92
PCNX4-209ENST00000555569 ZNF471Q9BX82 626 aaPredicted RBP9.29□□□□□ -0.92
PCNX4-209ENST00000555569 SAMD10Q9BYL1 202 aa9.29□□□□□ -0.92
PCNX4-209ENST00000555569 KANTRA0A1W2PQU2 76 aa9.28□□□□□ -0.92
PCNX4-209ENST00000555569 GAGE12JA6NER3 117 aa9.28□□□□□ -0.92
PCNX4-209ENST00000555569 BCL2L11O43521 198 aa9.28□□□□□ -0.92
PCNX4-209ENST00000555569 IGHV3-30P01768 117 aa9.28□□□□□ -0.92
PCNX4-209ENST00000555569 IGHV3-33P01772 117 aa9.28□□□□□ -0.92
PCNX4-209ENST00000555569 LINC00694P0DN24 101 aa9.28□□□□□ -0.92
PCNX4-209ENST00000555569 IGHV3-30-3P0DP02 117 aa9.28□□□□□ -0.92
PCNX4-209ENST00000555569 IGHV3-30-5P0DP03 117 aa9.28□□□□□ -0.92
PCNX4-209ENST00000555569 GAGE1Q13065 139 aa9.28□□□□□ -0.92
PCNX4-209ENST00000555569 GAGE4Q13068 117 aa9.28□□□□□ -0.92
PCNX4-209ENST00000555569 GAGE5Q13069 117 aa9.28□□□□□ -0.92
PCNX4-209ENST00000555569 LINC01559Q495D7 138 aa9.28□□□□□ -0.92
PCNX4-209ENST00000555569 GAGE13Q4V321 117 aa9.28□□□□□ -0.92
PCNX4-209ENST00000555569 UFSP1Q6NVU6 142 aa9.28□□□□□ -0.92
PCNX4-209ENST00000555569 SCRT2Q9NQ03 307 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms