RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 SCO2A0A1W2PP80 73 aa7.35□□□□□ -1.23
SHMT2-213ENST00000554600 GRIFINA4D1Z8 144 aa7.35□□□□□ -1.23
SHMT2-213ENST00000554600 PGPEP1LA6NFU8 196 aa7.35□□□□□ -1.23
SHMT2-213ENST00000554600 TEX46H3BTG2 121 aa7.35□□□□□ -1.23
SHMT2-213ENST00000554600 H3BVH4 76 aa7.35□□□□□ -1.23
SHMT2-213ENST00000554600 K7EQD1 137 aa7.35□□□□□ -1.23
SHMT2-213ENST00000554600 SIVA1O15304 175 aa7.35□□□□□ -1.23
SHMT2-213ENST00000554600 NXPH4O95158 308 aa7.35□□□□□ -1.23
SHMT2-213ENST00000554600 SULT1A2P50226 295 aa7.35□□□□□ -1.23
SHMT2-213ENST00000554600 ZNF506Q5JVG8 444 aa7.35□□□□□ -1.23
SHMT2-213ENST00000554600 FAM162BQ5T6X4 162 aa7.35□□□□□ -1.23
SHMT2-213ENST00000554600 TXNDC17Q9BRA2 123 aa7.35□□□□□ -1.23
SHMT2-213ENST00000554600 UPK3BQ9BT76 320 aa7.35□□□□□ -1.23
SHMT2-213ENST00000554600 GNG13Q9P2W3 67 aa7.35□□□□□ -1.23
SHMT2-213ENST00000554600 TRAV1-1A0A0B4J248 108 aa7.34□□□□□ -1.23
SHMT2-213ENST00000554600 LOC100131303A0A0U1RQF7 123 aa7.34□□□□□ -1.23
SHMT2-213ENST00000554600 RS1O15537 224 aa7.34□□□□□ -1.23
SHMT2-213ENST00000554600 S100A9P06702 114 aaKnown RBP7.34□□□□□ -1.23
SHMT2-213ENST00000554600 RNASE3P12724 160 aaKnown RBP7.34□□□□□ -1.23
SHMT2-213ENST00000554600 GATA1P15976 413 aaPredicted RBP7.34□□□□□ -1.23
SHMT2-213ENST00000554600 CFAP126Q5VTH2 177 aa7.34□□□□□ -1.23
SHMT2-213ENST00000554600 LYPD5Q6UWN5 251 aa7.34□□□□□ -1.23
SHMT2-213ENST00000554600 MANBALQ9NQG1 85 aa7.34□□□□□ -1.23
SHMT2-213ENST00000554600 KIAA1109Q2LD37 5005 aa7.33□□□□□ -1.24
SHMT2-213ENST00000554600 TRBV6-1A0A0K0K1D8 114 aa7.33□□□□□ -1.24
SHMT2-213ENST00000554600 LTAP01374 205 aa7.33□□□□□ -1.24
SHMT2-213ENST00000554600 CRIP1P50238 77 aa7.33□□□□□ -1.24
SHMT2-213ENST00000554600 CCL20P78556 96 aa7.33□□□□□ -1.24
SHMT2-213ENST00000554600 SYT8Q8NBV8 401 aa7.33□□□□□ -1.24
SHMT2-213ENST00000554600 PRADC1Q9BSG0 188 aa7.33□□□□□ -1.24
SHMT2-213ENST00000554600 KRTAP1-5Q9BYS1 174 aa7.33□□□□□ -1.24
SHMT2-213ENST00000554600 A0A1B0GVY2 172 aa7.32□□□□□ -1.24
SHMT2-213ENST00000554600 A0A1W2PPQ1 181 aa7.32□□□□□ -1.24
SHMT2-213ENST00000554600 A8MWV9 139 aa7.32□□□□□ -1.24
SHMT2-213ENST00000554600 KRBOX1C9JBD0 128 aa7.32□□□□□ -1.24
SHMT2-213ENST00000554600 CIDEAO60543 219 aa7.32□□□□□ -1.24
SHMT2-213ENST00000554600 IFNA1P01562 189 aa7.32□□□□□ -1.24
SHMT2-213ENST00000554600 ARMS2P0C7Q2 107 aa7.32□□□□□ -1.24
SHMT2-213ENST00000554600 RHOHQ15669 191 aa7.32□□□□□ -1.24
SHMT2-213ENST00000554600 ZNF674Q2M3X9 581 aa7.32□□□□□ -1.24
SHMT2-213ENST00000554600 PRR27Q6MZM9 219 aa7.32□□□□□ -1.24
SHMT2-213ENST00000554600 BAGE2Q86Y30 109 aa7.32□□□□□ -1.24
SHMT2-213ENST00000554600 SLC25A29Q8N8R3 303 aa7.32□□□□□ -1.24
SHMT2-213ENST00000554600 IL36BQ9NZH7 164 aa7.32□□□□□ -1.24
SHMT2-213ENST00000554600 PHLDA3Q9Y5J5 127 aa7.32□□□□□ -1.24
SHMT2-213ENST00000554600 DNAH17Q9UFH2 4485 aa7.32□□□□□ -1.24
SHMT2-213ENST00000554600 NKX2-5P52952 324 aaPredicted RBP7.31□□□□□ -1.24
SHMT2-213ENST00000554600 TNP2Q05952 138 aa7.31□□□□□ -1.24
SHMT2-213ENST00000554600 COX8CQ7Z4L0 72 aa7.31□□□□□ -1.24
SHMT2-213ENST00000554600 SH2D6Q7Z4S9 175 aa7.31□□□□□ -1.24
SHMT2-213ENST00000554600 PTH2Q96A98 100 aa7.31□□□□□ -1.24
SHMT2-213ENST00000554600 JPT2Q9H910 190 aa7.31□□□□□ -1.24
SHMT2-213ENST00000554600 TRBV6-4A0A1B0GX49 114 aa7.3□□□□□ -1.24
SHMT2-213ENST00000554600 M0R381 172 aa7.3□□□□□ -1.24
SHMT2-213ENST00000554600 MGST1P10620 155 aaKnown RBP7.3□□□□□ -1.24
SHMT2-213ENST00000554600 RPL35P42766 123 aaKnown RBP7.3□□□□□ -1.24
SHMT2-213ENST00000554600 RPL19P84098 196 aaKnown RBP7.3□□□□□ -1.24
SHMT2-213ENST00000554600 LINC01559Q495D7 138 aa7.3□□□□□ -1.24
SHMT2-213ENST00000554600 FAM74A4Q5TZK3 123 aa7.3□□□□□ -1.24
SHMT2-213ENST00000554600 DMRTA1Q5VZB9 504 aa7.3□□□□□ -1.24
SHMT2-213ENST00000554600 WFDC10BQ8IUB3 73 aa7.3□□□□□ -1.24
SHMT2-213ENST00000554600 PARLQ9H300 379 aa7.3□□□□□ -1.24
SHMT2-213ENST00000554600 LY96Q9Y6Y9 160 aa7.3□□□□□ -1.24
SHMT2-213ENST00000554600 DNAH2Q9P225 4427 aa7.3□□□□□ -1.24
SHMT2-213ENST00000554600 TRAV9-2A0A087WT02 112 aa7.29□□□□□ -1.24
SHMT2-213ENST00000554600 EVI2AP22794 236 aa7.29□□□□□ -1.24
SHMT2-213ENST00000554600 LINC00315P59091 139 aa7.29□□□□□ -1.24
SHMT2-213ENST00000554600 DNLZQ5SXM8 178 aa7.29□□□□□ -1.24
SHMT2-213ENST00000554600 ALKAL2Q6UX46 152 aa7.29□□□□□ -1.24
SHMT2-213ENST00000554600 ZFP2Q6ZN57 461 aa7.29□□□□□ -1.24
SHMT2-213ENST00000554600 DERL1Q9BUN8 251 aa7.29□□□□□ -1.24
SHMT2-213ENST00000554600 A0A087WWL8 130 aa7.28□□□□□ -1.24
SHMT2-213ENST00000554600 TRAV8-6A0A0B4J262 113 aa7.28□□□□□ -1.24
SHMT2-213ENST00000554600 GAGE12JA6NER3 117 aa7.28□□□□□ -1.24
SHMT2-213ENST00000554600 RHODO00212 210 aa7.28□□□□□ -1.24
SHMT2-213ENST00000554600 BLOC1S1P78537 153 aa7.28□□□□□ -1.24
SHMT2-213ENST00000554600 MEF2BQ02080 365 aaPredicted RBP7.28□□□□□ -1.24
SHMT2-213ENST00000554600 GAGE1Q13065 139 aa7.28□□□□□ -1.24
SHMT2-213ENST00000554600 GAGE4Q13068 117 aa7.28□□□□□ -1.24
SHMT2-213ENST00000554600 GAGE5Q13069 117 aa7.28□□□□□ -1.24
SHMT2-213ENST00000554600 GAGE13Q4V321 117 aa7.28□□□□□ -1.24
SHMT2-213ENST00000554600 CENPWQ5EE01 88 aa7.28□□□□□ -1.24
SHMT2-213ENST00000554600 OR10J3Q5JRS4 329 aa7.28□□□□□ -1.24
SHMT2-213ENST00000554600 PIK3CD-AS1Q5SR53 167 aa7.28□□□□□ -1.24
SHMT2-213ENST00000554600 ZFP82Q8N141 532 aa7.28□□□□□ -1.24
SHMT2-213ENST00000554600 ATP6V0E2Q8NHE4 81 aa7.28□□□□□ -1.24
SHMT2-213ENST00000554600 SAMD10Q9BYL1 202 aa7.28□□□□□ -1.24
SHMT2-213ENST00000554600 MED9Q9NWA0 146 aa7.28□□□□□ -1.24
SHMT2-213ENST00000554600 BOLA1Q9Y3E2 137 aa7.28□□□□□ -1.24
SHMT2-213ENST00000554600 RAB19A4D1S5 217 aa7.27□□□□□ -1.25
SHMT2-213ENST00000554600 PDE6DO43924 150 aa7.27□□□□□ -1.25
SHMT2-213ENST00000554600 BCL2P10415 239 aa7.27□□□□□ -1.25
SHMT2-213ENST00000554600 TAGLN2P37802 199 aaKnown RBP7.27□□□□□ -1.25
SHMT2-213ENST00000554600 GNG4P50150 75 aa7.27□□□□□ -1.25
SHMT2-213ENST00000554600 SSTP61278 116 aa7.27□□□□□ -1.25
SHMT2-213ENST00000554600 Q6ZSN1 163 aa7.27□□□□□ -1.25
SHMT2-213ENST00000554600 ZNF575Q86XF7 245 aa7.27□□□□□ -1.25
SHMT2-213ENST00000554600 C11orf52Q96A22 123 aa7.27□□□□□ -1.25
SHMT2-213ENST00000554600 DAZAP1Q96EP5 407 aaKnown RBP7.27□□□□□ -1.25
SHMT2-213ENST00000554600 MLST8Q9BVC4 326 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms