RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 GFI1BQ5VTD9 330 aa4.55□□□□□ -1.68
SCFD1-212ENST00000554486 MORN3Q6PF18 240 aaPredicted RBP4.55□□□□□ -1.68
SCFD1-212ENST00000554486 KIR2DL5AQ8N109 375 aa4.55□□□□□ -1.68
SCFD1-212ENST00000554486 KIR2DL5BQ8NHK3 375 aa4.55□□□□□ -1.68
SCFD1-212ENST00000554486 OCC1Q8TAD7 63 aa4.55□□□□□ -1.68
SCFD1-212ENST00000554486 ZC2HC1AQ96GY0 325 aa4.55□□□□□ -1.68
SCFD1-212ENST00000554486 NDFIP1Q9BT67 221 aa4.55□□□□□ -1.68
SCFD1-212ENST00000554486 XCL2Q9UBD3 114 aa4.55□□□□□ -1.68
SCFD1-212ENST00000554486 COL7A1Q02388 2944 aa4.55□□□□□ -1.68
SCFD1-212ENST00000554486 C7orf71A4D174 169 aa4.54□□□□□ -1.68
SCFD1-212ENST00000554486 ZNF324O75467 553 aaPredicted RBP4.54□□□□□ -1.68
SCFD1-212ENST00000554486 CA1P00915 261 aaPredicted RBP4.54□□□□□ -1.68
SCFD1-212ENST00000554486 GCGP01275 180 aa4.54□□□□□ -1.68
SCFD1-212ENST00000554486 AMBPP02760 352 aa4.54□□□□□ -1.68
SCFD1-212ENST00000554486 GPX1P07203 203 aa4.54□□□□□ -1.68
SCFD1-212ENST00000554486 RNASE4P34096 147 aaKnown RBP4.54□□□□□ -1.68
SCFD1-212ENST00000554486 NUTF2P61970 127 aaKnown RBP4.54□□□□□ -1.68
SCFD1-212ENST00000554486 UBE2V1Q13404 147 aa4.54□□□□□ -1.68
SCFD1-212ENST00000554486 OR5I1Q13606 314 aa4.54□□□□□ -1.68
SCFD1-212ENST00000554486 TMEM241Q24JQ0 296 aa4.54□□□□□ -1.68
SCFD1-212ENST00000554486 C10orf91Q5T1B1 145 aa4.54□□□□□ -1.68
SCFD1-212ENST00000554486 Q6AWC8 147 aa4.54□□□□□ -1.68
SCFD1-212ENST00000554486 C1orf158Q8N1D5 194 aa4.54□□□□□ -1.68
SCFD1-212ENST00000554486 CSNK1G2-AS1Q8NCQ2 148 aa4.54□□□□□ -1.68
SCFD1-212ENST00000554486 SMIM12Q96EX1 92 aa4.54□□□□□ -1.68
SCFD1-212ENST00000554486 SDF2L1Q9HCN8 221 aa4.54□□□□□ -1.68
SCFD1-212ENST00000554486 NAT8Q9UHE5 227 aa4.54□□□□□ -1.68
SCFD1-212ENST00000554486 LY96Q9Y6Y9 160 aa4.54□□□□□ -1.68
SCFD1-212ENST00000554486 DNAH9Q9NYC9 4486 aa4.54□□□□□ -1.68
SCFD1-212ENST00000554486 TRAV12-3A0A0B4J271 114 aa4.53□□□□□ -1.68
SCFD1-212ENST00000554486 C19orf71A6NCJ1 209 aa4.53□□□□□ -1.68
SCFD1-212ENST00000554486 F8W036 122 aa4.53□□□□□ -1.68
SCFD1-212ENST00000554486 UBE2CO00762 179 aa4.53□□□□□ -1.68
SCFD1-212ENST00000554486 SH2D1AO60880 128 aa4.53□□□□□ -1.68
SCFD1-212ENST00000554486 INSP01308 110 aa4.53□□□□□ -1.68
SCFD1-212ENST00000554486 MGST1P10620 155 aaKnown RBP4.53□□□□□ -1.68
SCFD1-212ENST00000554486 APOC4P55056 127 aa4.53□□□□□ -1.68
SCFD1-212ENST00000554486 RPL23P62829 140 aaKnown RBP4.53□□□□□ -1.68
SCFD1-212ENST00000554486 DEFA6Q01524 100 aa4.53□□□□□ -1.68
SCFD1-212ENST00000554486 DEFB121Q5J5C9 76 aa4.53□□□□□ -1.68
SCFD1-212ENST00000554486 LINC01551Q86U37 167 aa4.53□□□□□ -1.68
SCFD1-212ENST00000554486 MRAPQ8TCY5 172 aa4.53□□□□□ -1.68
SCFD1-212ENST00000554486 NIPSNAP3BQ9BS92 247 aa4.53□□□□□ -1.68
SCFD1-212ENST00000554486 SEC11CQ9BY50 192 aa4.53□□□□□ -1.68
SCFD1-212ENST00000554486 CARHSP1Q9Y2V2 147 aaKnown RBP4.53□□□□□ -1.68
SCFD1-212ENST00000554486 DNAH7Q8WXX0 4024 aa4.52□□□□□ -1.69
SCFD1-212ENST00000554486 HUWE1Q7Z6Z7 4374 aaKnown RBP4.52□□□□□ -1.69
SCFD1-212ENST00000554486 TRAV21A0A0B4J279 112 aa4.52□□□□□ -1.69
SCFD1-212ENST00000554486 FABP5P3A8MUU1 101 aa4.52□□□□□ -1.69
SCFD1-212ENST00000554486 PRM2P04554 102 aa4.52□□□□□ -1.69
SCFD1-212ENST00000554486 PFN1P07737 140 aaKnown RBP4.52□□□□□ -1.69
SCFD1-212ENST00000554486 ERVFC1-1P60608 527 aa4.52□□□□□ -1.69
SCFD1-212ENST00000554486 ADIRFQ15847 76 aa4.52□□□□□ -1.69
SCFD1-212ENST00000554486 DEFB135Q30KP9 77 aa4.52□□□□□ -1.69
SCFD1-212ENST00000554486 FAM162BQ5T6X4 162 aa4.52□□□□□ -1.69
SCFD1-212ENST00000554486 PRR27Q6MZM9 219 aa4.52□□□□□ -1.69
SCFD1-212ENST00000554486 ZNF705AQ6ZN79 300 aaPredicted RBP4.52□□□□□ -1.69
SCFD1-212ENST00000554486 SBSPONQ8IVN8 264 aa4.52□□□□□ -1.69
SCFD1-212ENST00000554486 ISOC2Q96AB3 205 aa4.52□□□□□ -1.69
SCFD1-212ENST00000554486 C20orf144Q9BQM9 153 aa4.52□□□□□ -1.69
SCFD1-212ENST00000554486 RNASE7Q9H1E1 156 aaKnown RBP4.52□□□□□ -1.69
SCFD1-212ENST00000554486 FBN3Q75N90 2809 aa4.51□□□□□ -1.69
SCFD1-212ENST00000554486 IGHV3OR16-12A0A075B7B8 117 aa4.51□□□□□ -1.69
SCFD1-212ENST00000554486 IGKV3D-20A0A0C4DH25 116 aa4.51□□□□□ -1.69
SCFD1-212ENST00000554486 ZNF705GA8MUZ8 300 aaPredicted RBP4.51□□□□□ -1.69
SCFD1-212ENST00000554486 KRBOX1C9JBD0 128 aa4.51□□□□□ -1.69
SCFD1-212ENST00000554486 RPL24P83731 157 aaKnown RBP4.51□□□□□ -1.69
SCFD1-212ENST00000554486 RPL19P84098 196 aaKnown RBP4.51□□□□□ -1.69
SCFD1-212ENST00000554486 PNRC1Q12796 327 aaPredicted RBP4.51□□□□□ -1.69
SCFD1-212ENST00000554486 MUC21Q5SSG8 566 aa4.51□□□□□ -1.69
SCFD1-212ENST00000554486 TMEM256Q8N2U0 113 aa4.51□□□□□ -1.69
SCFD1-212ENST00000554486 RCHY1Q96PM5 261 aa4.51□□□□□ -1.69
SCFD1-212ENST00000554486 LINC01587Q99440 93 aa4.51□□□□□ -1.69
SCFD1-212ENST00000554486 OVOL2Q9BRP0 275 aa4.51□□□□□ -1.69
SCFD1-212ENST00000554486 PYGO2Q9BRQ0 406 aa4.51□□□□□ -1.69
SCFD1-212ENST00000554486 LINC00467Q9BRT7 94 aa4.51□□□□□ -1.69
SCFD1-212ENST00000554486 RETNQ9HD89 108 aa4.51□□□□□ -1.69
SCFD1-212ENST00000554486 BIN3Q9NQY0 253 aa4.51□□□□□ -1.69
SCFD1-212ENST00000554486 TP53TG3Q9ULZ0 132 aa4.51□□□□□ -1.69
SCFD1-212ENST00000554486 GOLT1BQ9Y3E0 138 aa4.51□□□□□ -1.69
SCFD1-212ENST00000554486 MUC4Q99102 2169 aa4.51□□□□□ -1.69
SCFD1-212ENST00000554486 IGHV1OR15-1A0A075B7D0 117 aa4.5□□□□□ -1.69
SCFD1-212ENST00000554486 B4DEV8 164 aa4.5□□□□□ -1.69
SCFD1-212ENST00000554486 H7BYZ3 331 aa4.5□□□□□ -1.69
SCFD1-212ENST00000554486 M0R036 132 aa4.5□□□□□ -1.69
SCFD1-212ENST00000554486 GNRH2O43555 120 aa4.5□□□□□ -1.69
SCFD1-212ENST00000554486 ORM1P02763 201 aa4.5□□□□□ -1.69
SCFD1-212ENST00000554486 AZU1P20160 251 aa4.5□□□□□ -1.69
SCFD1-212ENST00000554486 TDRG1Q3Y452 100 aa4.5□□□□□ -1.69
SCFD1-212ENST00000554486 FAM231DQ6ZW35 169 aa4.5□□□□□ -1.69
SCFD1-212ENST00000554486 SMIM29Q86T20 159 aa4.5□□□□□ -1.69
SCFD1-212ENST00000554486 OR11H2Q8NH07 326 aa4.5□□□□□ -1.69
SCFD1-212ENST00000554486 SFRP2Q96HF1 295 aa4.5□□□□□ -1.69
SCFD1-212ENST00000554486 B9D2Q9BPU9 175 aa4.5□□□□□ -1.69
SCFD1-212ENST00000554486 TM2D3Q9BRN9 247 aa4.5□□□□□ -1.69
SCFD1-212ENST00000554486 TMEM208Q9BTX3 173 aa4.5□□□□□ -1.69
SCFD1-212ENST00000554486 OSTCQ9NRP0 149 aa4.5□□□□□ -1.69
SCFD1-212ENST00000554486 NAGKQ9UJ70 344 aa4.5□□□□□ -1.69
SCFD1-212ENST00000554486 TP53TG1Q9Y2A0 90 aa4.5□□□□□ -1.69
SCFD1-212ENST00000554486 V9GYV3 84 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms