RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 FABP1P07148 127 aa3.36□□□□□ -1.87
CKAP4-203ENST00000553039 SEC11BP0C7V7 166 aa3.36□□□□□ -1.87
CKAP4-203ENST00000553039 METTL15P1P0C7V9 234 aa3.36□□□□□ -1.87
CKAP4-203ENST00000553039 GALR1P47211 349 aa3.36□□□□□ -1.87
CKAP4-203ENST00000553039 RAB11AP62491 216 aa3.36□□□□□ -1.87
CKAP4-203ENST00000553039 SLC38A11Q08AI6 406 aa3.36□□□□□ -1.87
CKAP4-203ENST00000553039 ATP6V1FQ16864 119 aa3.36□□□□□ -1.87
CKAP4-203ENST00000553039 SPINK9Q5DT21 86 aa3.36□□□□□ -1.87
CKAP4-203ENST00000553039 FAM74A1Q5RGS3 127 aa3.36□□□□□ -1.87
CKAP4-203ENST00000553039 OR8G2PQ6IF36 304 aa3.36□□□□□ -1.87
CKAP4-203ENST00000553039 RNASEKQ6P5S7 137 aaKnown RBP3.36□□□□□ -1.87
CKAP4-203ENST00000553039 TMEM14EPQ6UXP3 125 aa3.36□□□□□ -1.87
CKAP4-203ENST00000553039 OR10P1Q8NGE3 313 aa3.36□□□□□ -1.87
CKAP4-203ENST00000553039 OR51G1Q8NGK1 321 aa3.36□□□□□ -1.87
CKAP4-203ENST00000553039 OR1L4Q8NGR5 311 aa3.36□□□□□ -1.87
CKAP4-203ENST00000553039 SCGB1C1Q8TD33 95 aa3.36□□□□□ -1.87
CKAP4-203ENST00000553039 PCNPQ8WW12 178 aaKnown RBP3.36□□□□□ -1.87
CKAP4-203ENST00000553039 DPH3Q96FX2 82 aa3.36□□□□□ -1.87
CKAP4-203ENST00000553039 TXNDC17Q9BRA2 123 aa3.36□□□□□ -1.87
CKAP4-203ENST00000553039 MRPL32Q9BYC8 188 aaKnown RBP3.36□□□□□ -1.87
CKAP4-203ENST00000553039 TMPRSS5Q9H3S3 457 aa3.36□□□□□ -1.87
CKAP4-203ENST00000553039 TRAV8-3A0A0A6YYJ7 113 aa3.35□□□□□ -1.87
CKAP4-203ENST00000553039 UBE2L5PA0A1B0GUS4 154 aa3.35□□□□□ -1.87
CKAP4-203ENST00000553039 UMAD1C9J7I0 102 aa3.35□□□□□ -1.87
CKAP4-203ENST00000553039 PANO1I0J062 215 aa3.35□□□□□ -1.87
CKAP4-203ENST00000553039 SOCS3O14543 225 aa3.35□□□□□ -1.87
CKAP4-203ENST00000553039 ORM1P02763 201 aa3.35□□□□□ -1.87
CKAP4-203ENST00000553039 NMBP08949 121 aa3.35□□□□□ -1.87
CKAP4-203ENST00000553039 IGLC1P0CG04 106 aa3.35□□□□□ -1.87
CKAP4-203ENST00000553039 RAB5CP51148 216 aa3.35□□□□□ -1.87
CKAP4-203ENST00000553039 KRTAP10-8P60410 259 aa3.35□□□□□ -1.87
CKAP4-203ENST00000553039 LINC01556Q5JQF7 62 aa3.35□□□□□ -1.87
CKAP4-203ENST00000553039 WFDC10BQ8IUB3 73 aa3.35□□□□□ -1.87
CKAP4-203ENST00000553039 PSMG3Q9BT73 122 aaPredicted RBP3.35□□□□□ -1.87
CKAP4-203ENST00000553039 RSG1Q9BU20 258 aa3.35□□□□□ -1.87
CKAP4-203ENST00000553039 TMEM147Q9BVK8 224 aa3.35□□□□□ -1.87
CKAP4-203ENST00000553039 GGACTQ9BVM4 153 aa3.35□□□□□ -1.87
CKAP4-203ENST00000553039 PARD6GQ9BYG4 376 aaPredicted RBP3.35□□□□□ -1.87
CKAP4-203ENST00000553039 ARV1Q9H2C2 271 aa3.35□□□□□ -1.87
CKAP4-203ENST00000553039 UQCC1Q9NVA1 299 aa3.35□□□□□ -1.87
CKAP4-203ENST00000553039 CSDC2Q9Y534 153 aaKnown RBP3.35□□□□□ -1.87
CKAP4-203ENST00000553039 TRAV8-1A0A0A6YYK1 113 aa3.34□□□□□ -1.87
CKAP4-203ENST00000553039 A0A0J9YXV3 536 aa3.34□□□□□ -1.87
CKAP4-203ENST00000553039 LINC00862A6NCI5 91 aa3.34□□□□□ -1.87
CKAP4-203ENST00000553039 FAM74A7A6NL05 159 aa3.34□□□□□ -1.87
CKAP4-203ENST00000553039 PMS2P5A8MQ11 134 aa3.34□□□□□ -1.87
CKAP4-203ENST00000553039 FNDC10F2Z333 226 aa3.34□□□□□ -1.87
CKAP4-203ENST00000553039 C17orf112F2Z3M2 114 aa3.34□□□□□ -1.87
CKAP4-203ENST00000553039 MPDU1O75352 247 aa3.34□□□□□ -1.87
CKAP4-203ENST00000553039 RNASE2P10153 161 aaKnown RBP3.34□□□□□ -1.87
CKAP4-203ENST00000553039 S100A1P23297 94 aa3.34□□□□□ -1.87
CKAP4-203ENST00000553039 ATP6V0CP27449 155 aa3.34□□□□□ -1.87
CKAP4-203ENST00000553039 SULT1A2P50226 295 aa3.34□□□□□ -1.87
CKAP4-203ENST00000553039 RND2P52198 227 aa3.34□□□□□ -1.87
CKAP4-203ENST00000553039 CRYBA4P53673 196 aa3.34□□□□□ -1.87
CKAP4-203ENST00000553039 LAGE3Q14657 143 aa3.34□□□□□ -1.87
CKAP4-203ENST00000553039 FAM74A3Q4VXF1 159 aa3.34□□□□□ -1.87
CKAP4-203ENST00000553039 C2orf83Q53S99 150 aa3.34□□□□□ -1.87
CKAP4-203ENST00000553039 AKR1C8PQ5T2L2 129 aa3.34□□□□□ -1.87
CKAP4-203ENST00000553039 REG3GQ6UW15 175 aa3.34□□□□□ -1.87
CKAP4-203ENST00000553039 DPPA3Q6W0C5 159 aa3.34□□□□□ -1.87
CKAP4-203ENST00000553039 Q6ZTI0 123 aa3.34□□□□□ -1.87
CKAP4-203ENST00000553039 COMMD7Q86VX2 200 aa3.34□□□□□ -1.87
CKAP4-203ENST00000553039 SLC7A5P1Q8MH63 180 aa3.34□□□□□ -1.87
CKAP4-203ENST00000553039 C15orf54Q8N8G6 183 aa3.34□□□□□ -1.87
CKAP4-203ENST00000553039 OR2G3Q8NGZ4 309 aa3.34□□□□□ -1.87
CKAP4-203ENST00000553039 RNASEH2CQ8TDP1 164 aaKnown RBP3.34□□□□□ -1.87
CKAP4-203ENST00000553039 BLNKQ8WV28 456 aa3.34□□□□□ -1.87
CKAP4-203ENST00000553039 C11orf52Q96A22 123 aa3.34□□□□□ -1.87
CKAP4-203ENST00000553039 RMI2Q96E14 147 aa3.34□□□□□ -1.87
CKAP4-203ENST00000553039 PBDC1Q9BVG4 233 aa3.34□□□□□ -1.87
CKAP4-203ENST00000553039 SLC25A39Q9BZJ4 359 aaPredicted RBP3.34□□□□□ -1.87
CKAP4-203ENST00000553039 WDR61Q9GZS3 305 aaKnown RBP3.34□□□□□ -1.87
CKAP4-203ENST00000553039 SH3BGRL3Q9H299 93 aa3.34□□□□□ -1.87
CKAP4-203ENST00000553039 WFDC1Q9HC57 220 aa3.34□□□□□ -1.87
CKAP4-203ENST00000553039 KCNIP2Q9NS61 270 aa3.34□□□□□ -1.87
CKAP4-203ENST00000553039 MED9Q9NWA0 146 aa3.34□□□□□ -1.87
CKAP4-203ENST00000553039 FUT9Q9Y231 359 aa3.34□□□□□ -1.87
CKAP4-203ENST00000553039 TIMM9Q9Y5J7 89 aa3.34□□□□□ -1.87
CKAP4-203ENST00000553039 FAT3Q8TDW7 4589 aa3.33□□□□□ -1.88
CKAP4-203ENST00000553039 TRGV1A0A0A0MS02 117 aa3.33□□□□□ -1.88
CKAP4-203ENST00000553039 TRGV4A0A0C4DH28 118 aa3.33□□□□□ -1.88
CKAP4-203ENST00000553039 SMCO3A2RU48 225 aa3.33□□□□□ -1.88
CKAP4-203ENST00000553039 TEX46H3BTG2 121 aa3.33□□□□□ -1.88
CKAP4-203ENST00000553039 K7EQD1 137 aa3.33□□□□□ -1.88
CKAP4-203ENST00000553039 LECT2O14960 151 aa3.33□□□□□ -1.88
CKAP4-203ENST00000553039 MBP02144 154 aa3.33□□□□□ -1.88
CKAP4-203ENST00000553039 FGF7P21781 194 aa3.33□□□□□ -1.88
CKAP4-203ENST00000553039 RPL13AP40429 203 aaKnown RBP3.33□□□□□ -1.88
CKAP4-203ENST00000553039 PLP1P60201 277 aa3.33□□□□□ -1.88
CKAP4-203ENST00000553039 RAB2AP61019 212 aa3.33□□□□□ -1.88
CKAP4-203ENST00000553039 SERF2P84101 59 aa3.33□□□□□ -1.88
CKAP4-203ENST00000553039 HIST1H1AQ02539 215 aaPredicted RBP3.33□□□□□ -1.88
CKAP4-203ENST00000553039 AKR1C1Q04828 323 aa3.33□□□□□ -1.88
CKAP4-203ENST00000553039 ARL16Q0P5N6 197 aa3.33□□□□□ -1.88
CKAP4-203ENST00000553039 RAB31Q13636 194 aa3.33□□□□□ -1.88
CKAP4-203ENST00000553039 BSXQ3C1V8 233 aa3.33□□□□□ -1.88
CKAP4-203ENST00000553039 KIAA1644Q3SXP7 199 aa3.33□□□□□ -1.88
CKAP4-203ENST00000553039 C14orf177Q52M58 125 aa3.33□□□□□ -1.88
CKAP4-203ENST00000553039 KCNIP4Q6PIL6 250 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 182.2 ms