RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 FAM231DQ6ZW35 169 aa15.2■□□□□ 0.02
NEK3-202ENST00000550841 LINC00862A6NCI5 91 aa15.19■□□□□ 0.02
NEK3-202ENST00000550841 H3BVH4 76 aa15.19■□□□□ 0.02
NEK3-202ENST00000550841 SFTA3P0C7M3 94 aa15.19■□□□□ 0.02
NEK3-202ENST00000550841 RPL19P84098 196 aaKnown RBP15.19■□□□□ 0.02
NEK3-202ENST00000550841 ZNF876PQ49A33 203 aa15.19■□□□□ 0.02
NEK3-202ENST00000550841 PIK3CD-AS1Q5SR53 167 aa15.19■□□□□ 0.02
NEK3-202ENST00000550841 ZNF575Q86XF7 245 aa15.19■□□□□ 0.02
NEK3-202ENST00000550841 HTN3P15516 51 aa15.18■□□□□ 0.02
NEK3-202ENST00000550841 ERVFC1-1P60608 527 aa15.18■□□□□ 0.02
NEK3-202ENST00000550841 COMMD7Q86VX2 200 aa15.18■□□□□ 0.02
NEK3-202ENST00000550841 SYT8Q8NBV8 401 aa15.18■□□□□ 0.02
NEK3-202ENST00000550841 FAM210BQ96KR6 192 aa15.18■□□□□ 0.02
NEK3-202ENST00000550841 RNASE7Q9H1E1 156 aaKnown RBP15.18■□□□□ 0.02
NEK3-202ENST00000550841 RPP21Q9H633 154 aaKnown RBP15.18■□□□□ 0.02
NEK3-202ENST00000550841 PHLDA3Q9Y5J5 127 aa15.18■□□□□ 0.02
NEK3-202ENST00000550841 GATCO43716 136 aaKnown RBP15.17■□□□□ 0.02
NEK3-202ENST00000550841 SCRT2Q9NQ03 307 aa15.17■□□□□ 0.02
NEK3-202ENST00000550841 F5H768 121 aa15.16■□□□□ 0.02
NEK3-202ENST00000550841 CIDEAO60543 219 aa15.16■□□□□ 0.02
NEK3-202ENST00000550841 RPL23P62829 140 aaKnown RBP15.16■□□□□ 0.02
NEK3-202ENST00000550841 C15orf54Q8N8G6 183 aa15.16■□□□□ 0.02
NEK3-202ENST00000550841 OSTCQ9NRP0 149 aa15.16■□□□□ 0.02
NEK3-202ENST00000550841 A0A1W2PPQ1 181 aa15.15■□□□□ 0.02
NEK3-202ENST00000550841 OR5AL1P0C617 328 aa15.15■□□□□ 0.02
NEK3-202ENST00000550841 TCTAP57738 103 aa15.15■□□□□ 0.02
NEK3-202ENST00000550841 ADIRFQ15847 76 aa15.15■□□□□ 0.02
NEK3-202ENST00000550841 OR4C5Q8NGB2 326 aa15.15■□□□□ 0.02
NEK3-202ENST00000550841 SSBP4Q9BWG4 385 aaPredicted RBP15.15■□□□□ 0.02
NEK3-202ENST00000550841 TRAV4A0A0B4J268 109 aa15.14■□□□□ 0.01
NEK3-202ENST00000550841 A8MWL6 223 aa15.14■□□□□ 0.01
NEK3-202ENST00000550841 F2Z2F3 143 aa15.14■□□□□ 0.01
NEK3-202ENST00000550841 SNAI2O43623 268 aa15.14■□□□□ 0.01
NEK3-202ENST00000550841 SLAQ13239 276 aa15.14■□□□□ 0.01
NEK3-202ENST00000550841 ZFP82Q8N141 532 aa15.14■□□□□ 0.01
NEK3-202ENST00000550841 FER1L6-AS1Q8NA97 138 aa15.14■□□□□ 0.01
NEK3-202ENST00000550841 ISOC2Q96AB3 205 aa15.14■□□□□ 0.01
NEK3-202ENST00000550841 MUC4Q99102 2169 aa15.14■□□□□ 0.01
NEK3-202ENST00000550841 A8MWV9 139 aa15.13■□□□□ 0.01
NEK3-202ENST00000550841 IGLL5B9A064 214 aa15.13■□□□□ 0.01
NEK3-202ENST00000550841 CT83Q5H943 113 aa15.13■□□□□ 0.01
NEK3-202ENST00000550841 TMEM218A2RU14 115 aa15.12■□□□□ 0.01
NEK3-202ENST00000550841 PNRC1Q12796 327 aaPredicted RBP15.12■□□□□ 0.01
NEK3-202ENST00000550841 DMRTA1Q5VZB9 504 aa15.12■□□□□ 0.01
NEK3-202ENST00000550841 SFRP2Q96HF1 295 aa15.12■□□□□ 0.01
NEK3-202ENST00000550841 DNAH7Q8WXX0 4024 aa15.11■□□□□ 0.01
NEK3-202ENST00000550841 M0R381 172 aa15.11■□□□□ 0.01
NEK3-202ENST00000550841 RS1O15537 224 aa15.11■□□□□ 0.01
NEK3-202ENST00000550841 IGLC6P0CF74 106 aa15.11■□□□□ 0.01
NEK3-202ENST00000550841 GZMBP10144 247 aa15.11■□□□□ 0.01
NEK3-202ENST00000550841 SPANXN1Q5VSR9 72 aa15.11■□□□□ 0.01
NEK3-202ENST00000550841 OR10G8Q8NGN5 311 aa15.11■□□□□ 0.01
NEK3-202ENST00000550841 TRGV4A0A0C4DH28 118 aa15.1■□□□□ 0.01
NEK3-202ENST00000550841 IGHV3-53P01767 116 aa15.1■□□□□ 0.01
NEK3-202ENST00000550841 CACNG7P62955 275 aa15.1■□□□□ 0.01
NEK3-202ENST00000550841 TPPP3Q9BW30 176 aa15.1■□□□□ 0.01
NEK3-202ENST00000550841 IGHV4-4A0A075B6R2 117 aa15.09■□□□□ 0.01
NEK3-202ENST00000550841 F8W036 122 aa15.09■□□□□ 0.01
NEK3-202ENST00000550841 CFAP126Q5VTH2 177 aa15.09■□□□□ 0.01
NEK3-202ENST00000550841 WDR73Q6P4I2 378 aa15.09■□□□□ 0.01
NEK3-202ENST00000550841 POM121L12Q8N7R1 296 aa15.09■□□□□ 0.01
NEK3-202ENST00000550841 ZNF479Q96JC4 524 aa15.09■□□□□ 0.01
NEK3-202ENST00000550841 LCE6AA0A183 80 aa15.08■□□□□ 0
NEK3-202ENST00000550841 HOXA5P20719 270 aa15.08■□□□□ 0
NEK3-202ENST00000550841 TMEM88Q6PEY1 159 aa15.08■□□□□ 0
NEK3-202ENST00000550841 OR10AG1Q8NH19 301 aa15.08■□□□□ 0
NEK3-202ENST00000550841 TSKUQ8WUA8 353 aa15.08■□□□□ 0
NEK3-202ENST00000550841 GFRA4Q9GZZ7 299 aa15.08■□□□□ 0
NEK3-202ENST00000550841 PRO0255Q9UI72 69 aa15.08■□□□□ 0
NEK3-202ENST00000550841 FAM231BA6NCW3 169 aa15.07■□□□□ 0
NEK3-202ENST00000550841 NXPH4O95158 308 aa15.07■□□□□ 0
NEK3-202ENST00000550841 FHL2Q14192 279 aa15.07■□□□□ 0
NEK3-202ENST00000550841 LYZL1Q6UWQ5 148 aa15.07■□□□□ 0
NEK3-202ENST00000550841 ZFP2Q6ZN57 461 aa15.07■□□□□ 0
NEK3-202ENST00000550841 C15orf53Q8NAA6 179 aa15.07■□□□□ 0
NEK3-202ENST00000550841 SEC11CQ9BY50 192 aa15.07■□□□□ 0
NEK3-202ENST00000550841 HHLA3Q9XRX5 114 aa15.07■□□□□ 0
NEK3-202ENST00000550841 H3BNG1 76 aa15.06■□□□□ 0
NEK3-202ENST00000550841 RHODO00212 210 aa15.06■□□□□ 0
NEK3-202ENST00000550841 PPP1R2P9O14990 202 aa15.06■□□□□ 0
NEK3-202ENST00000550841 FOXA3P55318 350 aaPredicted RBP15.06■□□□□ 0
NEK3-202ENST00000550841 V9GYV3 84 aa15.06■□□□□ 0
NEK3-202ENST00000550841 TRAV26-1A0A087WT03 109 aa15.05■□□□□ -0
NEK3-202ENST00000550841 PAX4O43316 350 aa15.05■□□□□ -0
NEK3-202ENST00000550841 APLNQ9ULZ1 77 aa15.05■□□□□ -0
NEK3-202ENST00000550841 MUC21A0A0G2JKD1 596 aa15.04■□□□□ -0
NEK3-202ENST00000550841 MUC21A0A140T8X8 626 aa15.04■□□□□ -0
NEK3-202ENST00000550841 CTRLP40313 264 aa15.04■□□□□ -0
NEK3-202ENST00000550841 BORCS7Q96B45 105 aa15.04■□□□□ -0
NEK3-202ENST00000550841 MT-ND4LP03901 98 aa15.03■□□□□ -0
NEK3-202ENST00000550841 CRYBA4P53673 196 aa15.03■□□□□ -0
NEK3-202ENST00000550841 SSTP61278 116 aa15.03■□□□□ -0
NEK3-202ENST00000550841 GTSF1Q8WW33 167 aa15.03■□□□□ -0
NEK3-202ENST00000550841 JPT2Q9H910 190 aa15.03■□□□□ -0
NEK3-202ENST00000550841 A0A0J9YY99 117 aa15.02■□□□□ -0
NEK3-202ENST00000550841 SMIM17P0DL12 118 aa15.02■□□□□ -0
NEK3-202ENST00000550841 GATA1P15976 413 aaPredicted RBP15.02■□□□□ -0
NEK3-202ENST00000550841 NTF3P20783 257 aa15.02■□□□□ -0
NEK3-202ENST00000550841 ANAPC16Q96DE5 110 aa15.02■□□□□ -0
NEK3-202ENST00000550841 PGLYRP4Q96LB8 373 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms