RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 SOHLH1Q5JUK2 328 aa4.14□□□□□ -1.75
SCAF11-213ENST00000550629 FAM162BQ5T6X4 162 aa4.14□□□□□ -1.75
SCAF11-213ENST00000550629 SBSPONQ8IVN8 264 aa4.14□□□□□ -1.75
SCAF11-213ENST00000550629 SMIM7Q9BQ49 75 aa4.14□□□□□ -1.75
SCAF11-213ENST00000550629 PYGO2Q9BRQ0 406 aa4.14□□□□□ -1.75
SCAF11-213ENST00000550629 DERL1Q9BUN8 251 aa4.14□□□□□ -1.75
SCAF11-213ENST00000550629 PARLQ9H300 379 aa4.14□□□□□ -1.75
SCAF11-213ENST00000550629 NBEAL2Q6ZNJ1 2754 aa4.14□□□□□ -1.75
SCAF11-213ENST00000550629 TRAV12-2A0A075B6T6 113 aa4.13□□□□□ -1.75
SCAF11-213ENST00000550629 TRAV12-3A0A0B4J271 114 aa4.13□□□□□ -1.75
SCAF11-213ENST00000550629 TMEM189A5PLL7 270 aa4.13□□□□□ -1.75
SCAF11-213ENST00000550629 CBY3A6NI87 242 aa4.13□□□□□ -1.75
SCAF11-213ENST00000550629 FABP5P3A8MUU1 101 aa4.13□□□□□ -1.75
SCAF11-213ENST00000550629 ZNF727A8MUV8 499 aa4.13□□□□□ -1.75
SCAF11-213ENST00000550629 C9JQL5 133 aa4.13□□□□□ -1.75
SCAF11-213ENST00000550629 GCGP01275 180 aa4.13□□□□□ -1.75
SCAF11-213ENST00000550629 SFTA3P0C7M3 94 aa4.13□□□□□ -1.75
SCAF11-213ENST00000550629 MIFP14174 115 aa4.13□□□□□ -1.75
SCAF11-213ENST00000550629 FXYD7P58549 80 aa4.13□□□□□ -1.75
SCAF11-213ENST00000550629 BTN1A1Q13410 526 aa4.13□□□□□ -1.75
SCAF11-213ENST00000550629 NDUFA5Q16718 116 aa4.13□□□□□ -1.75
SCAF11-213ENST00000550629 TMEM241Q24JQ0 296 aa4.13□□□□□ -1.75
SCAF11-213ENST00000550629 ZNF674Q2M3X9 581 aa4.13□□□□□ -1.75
SCAF11-213ENST00000550629 DEFB135Q30KP9 77 aa4.13□□□□□ -1.75
SCAF11-213ENST00000550629 ZNF493Q6ZR52 646 aa4.13□□□□□ -1.75
SCAF11-213ENST00000550629 COMMD7Q86VX2 200 aa4.13□□□□□ -1.75
SCAF11-213ENST00000550629 C1orf158Q8N1D5 194 aa4.13□□□□□ -1.75
SCAF11-213ENST00000550629 ZC2HC1AQ96GY0 325 aa4.13□□□□□ -1.75
SCAF11-213ENST00000550629 KCNS1Q96KK3 526 aa4.13□□□□□ -1.75
SCAF11-213ENST00000550629 SGK494Q96LW2 274 aa4.13□□□□□ -1.75
SCAF11-213ENST00000550629 OVOL2Q9BRP0 275 aa4.13□□□□□ -1.75
SCAF11-213ENST00000550629 TMEM208Q9BTX3 173 aa4.13□□□□□ -1.75
SCAF11-213ENST00000550629 TP53TG3Q9ULZ0 132 aa4.13□□□□□ -1.75
SCAF11-213ENST00000550629 DNAH3Q8TD57 4116 aa4.13□□□□□ -1.75
SCAF11-213ENST00000550629 CMYA5Q8N3K9 4069 aa4.13□□□□□ -1.75
SCAF11-213ENST00000550629 IGHV1OR15-1A0A075B7D0 117 aa4.12□□□□□ -1.75
SCAF11-213ENST00000550629 hDV102S1A0JD36 115 aa4.12□□□□□ -1.75
SCAF11-213ENST00000550629 TMEM218A2RU14 115 aa4.12□□□□□ -1.75
SCAF11-213ENST00000550629 IGLV2-8P01709 118 aa4.12□□□□□ -1.75
SCAF11-213ENST00000550629 RBMY1A1P0DJD3 496 aaKnown RBP4.12□□□□□ -1.75
SCAF11-213ENST00000550629 RBMY1CP0DJD4 496 aa4.12□□□□□ -1.75
SCAF11-213ENST00000550629 PRB4P10163 310 aaPredicted RBP4.12□□□□□ -1.75
SCAF11-213ENST00000550629 ZNF80P51504 273 aaPredicted RBP4.12□□□□□ -1.75
SCAF11-213ENST00000550629 CEBPGP53567 150 aa4.12□□□□□ -1.75
SCAF11-213ENST00000550629 PNRC1Q12796 327 aaPredicted RBP4.12□□□□□ -1.75
SCAF11-213ENST00000550629 RBMY1FQ15415 496 aaKnown RBP4.12□□□□□ -1.75
SCAF11-213ENST00000550629 PRR9Q5T870 116 aa4.12□□□□□ -1.75
SCAF11-213ENST00000550629 FAM159AQ6UWV7 190 aa4.12□□□□□ -1.75
SCAF11-213ENST00000550629 FAM231DQ6ZW35 169 aa4.12□□□□□ -1.75
SCAF11-213ENST00000550629 LINC01551Q86U37 167 aa4.12□□□□□ -1.75
SCAF11-213ENST00000550629 OR11H2Q8NH07 326 aa4.12□□□□□ -1.75
SCAF11-213ENST00000550629 LINC01587Q99440 93 aa4.12□□□□□ -1.75
SCAF11-213ENST00000550629 C11orf68Q9H3H3 251 aaKnown RBP4.12□□□□□ -1.75
SCAF11-213ENST00000550629 NAT8Q9UHE5 227 aa4.12□□□□□ -1.75
SCAF11-213ENST00000550629 COL7A1Q02388 2944 aa4.12□□□□□ -1.75
SCAF11-213ENST00000550629 TEX48A0A1B0GUV7 120 aa4.11□□□□□ -1.75
SCAF11-213ENST00000550629 C19orf71A6NCJ1 209 aa4.11□□□□□ -1.75
SCAF11-213ENST00000550629 SH2D1AO60880 128 aa4.11□□□□□ -1.75
SCAF11-213ENST00000550629 CXCL1P09341 107 aa4.11□□□□□ -1.75
SCAF11-213ENST00000550629 MGST1P10620 155 aaKnown RBP4.11□□□□□ -1.75
SCAF11-213ENST00000550629 CRIP1P50238 77 aa4.11□□□□□ -1.75
SCAF11-213ENST00000550629 RPS20P60866 119 aaKnown RBP4.11□□□□□ -1.75
SCAF11-213ENST00000550629 RRN3P1Q2M238 152 aa4.11□□□□□ -1.75
SCAF11-213ENST00000550629 DNLZQ5SXM8 178 aa4.11□□□□□ -1.75
SCAF11-213ENST00000550629 IBA57Q5T440 356 aaKnown RBP4.11□□□□□ -1.75
SCAF11-213ENST00000550629 Q8NAQ8 132 aa4.11□□□□□ -1.75
SCAF11-213ENST00000550629 NHLRC2Q8NBF2 726 aa4.11□□□□□ -1.75
SCAF11-213ENST00000550629 OCC1Q8TAD7 63 aa4.11□□□□□ -1.75
SCAF11-213ENST00000550629 RNASE8Q8TDE3 154 aaKnown RBP4.11□□□□□ -1.75
SCAF11-213ENST00000550629 TMEM263Q8WUH6 116 aaKnown RBP4.11□□□□□ -1.75
SCAF11-213ENST00000550629 C16orf74Q96GX8 76 aa4.11□□□□□ -1.75
SCAF11-213ENST00000550629 SEC11CQ9BY50 192 aa4.11□□□□□ -1.75
SCAF11-213ENST00000550629 SDF2L1Q9HCN8 221 aa4.11□□□□□ -1.75
SCAF11-213ENST00000550629 STAB2Q8WWQ8 2551 aa4.11□□□□□ -1.75
SCAF11-213ENST00000550629 IGHV3OR16-12A0A075B7B8 117 aa4.1□□□□□ -1.75
SCAF11-213ENST00000550629 XKRY2A2RUG3 117 aa4.1□□□□□ -1.75
SCAF11-213ENST00000550629 B4DEV8 164 aa4.1□□□□□ -1.75
SCAF11-213ENST00000550629 KRBOX1C9JBD0 128 aa4.1□□□□□ -1.75
SCAF11-213ENST00000550629 J3KRW8 73 aa4.1□□□□□ -1.75
SCAF11-213ENST00000550629 K7EN84 100 aa4.1□□□□□ -1.75
SCAF11-213ENST00000550629 P01737 135 aa4.1□□□□□ -1.75
SCAF11-213ENST00000550629 ORM1P02763 201 aa4.1□□□□□ -1.75
SCAF11-213ENST00000550629 ZNF415Q09FC8 603 aa4.1□□□□□ -1.75
SCAF11-213ENST00000550629 DAZ2Q13117 558 aaKnown RBP4.1□□□□□ -1.75
SCAF11-213ENST00000550629 C10orf91Q5T1B1 145 aa4.1□□□□□ -1.75
SCAF11-213ENST00000550629 PRR27Q6MZM9 219 aa4.1□□□□□ -1.75
SCAF11-213ENST00000550629 C15orf54Q8N8G6 183 aa4.1□□□□□ -1.75
SCAF11-213ENST00000550629 PTH2Q96A98 100 aa4.1□□□□□ -1.75
SCAF11-213ENST00000550629 ISOC2Q96AB3 205 aa4.1□□□□□ -1.75
SCAF11-213ENST00000550629 SPXQ9BT56 116 aa4.1□□□□□ -1.75
SCAF11-213ENST00000550629 NDUFAF3Q9BU61 184 aa4.1□□□□□ -1.75
SCAF11-213ENST00000550629 OSTCQ9NRP0 149 aa4.1□□□□□ -1.75
SCAF11-213ENST00000550629 CARHSP1Q9Y2V2 147 aaKnown RBP4.1□□□□□ -1.75
SCAF11-213ENST00000550629 TENM3Q9P273 2699 aa4.1□□□□□ -1.75
SCAF11-213ENST00000550629 IGKV3D-20A0A0C4DH25 116 aa4.09□□□□□ -1.75
SCAF11-213ENST00000550629 IGHV3-16A0A0C4DH30 117 aa4.09□□□□□ -1.75
SCAF11-213ENST00000550629 PLAC8L1A1L4L8 177 aa4.09□□□□□ -1.75
SCAF11-213ENST00000550629 FAM231BA6NCW3 169 aa4.09□□□□□ -1.75
SCAF11-213ENST00000550629 PGPEP1LA6NFU8 196 aa4.09□□□□□ -1.75
SCAF11-213ENST00000550629 LYRM9A8MSI8 78 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms