RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 ST20Q9HBF5 79 aa7.42□□□□□ -1.22
RAB5B-206ENST00000549505 IGLC3P0DOY3 106 aa7.42□□□□□ -1.22
RAB5B-206ENST00000549505 OR2K2Q8NGT1 345 aa7.42□□□□□ -1.22
RAB5B-206ENST00000549505 ORAOV1Q8WV07 137 aa7.42□□□□□ -1.22
RAB5B-206ENST00000549505 FAM110AQ9BQ89 295 aa7.42□□□□□ -1.22
RAB5B-206ENST00000549505 MAP1LC3CQ9BXW4 147 aa7.42□□□□□ -1.22
RAB5B-206ENST00000549505 ZNF256Q9Y2P7 627 aaPredicted RBP7.42□□□□□ -1.22
RAB5B-206ENST00000549505 HBDP02042 147 aa7.41□□□□□ -1.22
RAB5B-206ENST00000549505 FCER1GP30273 86 aa7.41□□□□□ -1.22
RAB5B-206ENST00000549505 PRR31Q5SQ13 230 aa7.41□□□□□ -1.22
RAB5B-206ENST00000549505 PRSS3P2Q8NHM4 247 aa7.41□□□□□ -1.22
RAB5B-206ENST00000549505 ZMAT4Q9H898 229 aa7.41□□□□□ -1.22
RAB5B-206ENST00000549505 HLA-DRB4P13762 266 aa7.41□□□□□ -1.22
RAB5B-206ENST00000549505 Q6ZQT7 251 aa7.41□□□□□ -1.22
RAB5B-206ENST00000549505 DPH3P1Q9H4G8 78 aa7.41□□□□□ -1.22
RAB5B-206ENST00000549505 HLA-DRB4X5D2U9 266 aa7.41□□□□□ -1.22
RAB5B-206ENST00000549505 K7ERU9 68 aa7.41□□□□□ -1.22
RAB5B-206ENST00000549505 HILS1P60008 231 aa7.41□□□□□ -1.22
RAB5B-206ENST00000549505 MRPS16Q9Y3D3 137 aaKnown RBP7.41□□□□□ -1.22
RAB5B-206ENST00000549505 IGHV3-16A0A0C4DH30 117 aa7.4□□□□□ -1.22
RAB5B-206ENST00000549505 TPPP3Q9BW30 176 aa7.4□□□□□ -1.22
RAB5B-206ENST00000549505 GAGE12BA1L429 117 aa7.4□□□□□ -1.23
RAB5B-206ENST00000549505 F6UB75 175 aa7.4□□□□□ -1.23
RAB5B-206ENST00000549505 DEFB114Q30KQ6 69 aa7.4□□□□□ -1.23
RAB5B-206ENST00000549505 LINC00173Q6ZV60 143 aa7.4□□□□□ -1.23
RAB5B-206ENST00000549505 UQCR10Q9UDW1 63 aa7.4□□□□□ -1.23
RAB5B-206ENST00000549505 TRBV6-5A0A0K0K1A5 114 aa7.39□□□□□ -1.23
RAB5B-206ENST00000549505 LINC01549A6NIU2 74 aa7.39□□□□□ -1.23
RAB5B-206ENST00000549505 PRB4P10163 310 aaPredicted RBP7.39□□□□□ -1.23
RAB5B-206ENST00000549505 RNASE4P34096 147 aaKnown RBP7.39□□□□□ -1.23
RAB5B-206ENST00000549505 WNK2Q9Y3S1 2297 aa7.39□□□□□ -1.23
RAB5B-206ENST00000549505 ZFHX3Q15911 3703 aa7.39□□□□□ -1.23
RAB5B-206ENST00000549505 APCP25054 2843 aa7.39□□□□□ -1.23
RAB5B-206ENST00000549505 AKAP6Q13023 2319 aa7.39□□□□□ -1.23
RAB5B-206ENST00000549505 EVI2AP22794 236 aa7.38□□□□□ -1.23
RAB5B-206ENST00000549505 SLURP1P55000 103 aa7.38□□□□□ -1.23
RAB5B-206ENST00000549505 C18orf65Q6ZTR6 163 aa7.38□□□□□ -1.23
RAB5B-206ENST00000549505 H3BMM0 161 aa7.38□□□□□ -1.23
RAB5B-206ENST00000549505 H3BVH4 76 aa7.38□□□□□ -1.23
RAB5B-206ENST00000549505 SPANXN1Q5VSR9 72 aa7.38□□□□□ -1.23
RAB5B-206ENST00000549505 OR11H1Q8NG94 326 aa7.38□□□□□ -1.23
RAB5B-206ENST00000549505 TENM4Q6N022 2769 aa7.38□□□□□ -1.23
RAB5B-206ENST00000549505 TRAV26-1A0A087WT03 109 aa7.38□□□□□ -1.23
RAB5B-206ENST00000549505 CMC4P56277 68 aaPredicted RBP7.38□□□□□ -1.23
RAB5B-206ENST00000549505 TCTAP57738 103 aa7.38□□□□□ -1.23
RAB5B-206ENST00000549505 RPL11P62913 178 aaKnown RBP7.38□□□□□ -1.23
RAB5B-206ENST00000549505 RASL10AQ92737 203 aa7.38□□□□□ -1.23
RAB5B-206ENST00000549505 DLX4Q92988 240 aaPredicted RBP7.38□□□□□ -1.23
RAB5B-206ENST00000549505 RAX2Q96IS3 184 aa7.38□□□□□ -1.23
RAB5B-206ENST00000549505 AP1S3Q96PC3 154 aa7.38□□□□□ -1.23
RAB5B-206ENST00000549505 TIMM8BQ9Y5J9 83 aaPredicted RBP7.38□□□□□ -1.23
RAB5B-206ENST00000549505 TSSC4Q9Y5U2 329 aaPredicted RBP7.38□□□□□ -1.23
RAB5B-206ENST00000549505 ANKRD17O75179 2603 aaKnown RBP7.37□□□□□ -1.23
RAB5B-206ENST00000549505 OR4C46A6NHA9 309 aa7.37□□□□□ -1.23
RAB5B-206ENST00000549505 MPV17L2Q567V2 206 aa7.37□□□□□ -1.23
RAB5B-206ENST00000549505 JMJD8Q96S16 334 aa7.37□□□□□ -1.23
RAB5B-206ENST00000549505 ABCA1O95477 2261 aa7.37□□□□□ -1.23
RAB5B-206ENST00000549505 IGHV1OR15-1A0A075B7D0 117 aa7.37□□□□□ -1.23
RAB5B-206ENST00000549505 GAS8-AS1O95177 125 aa7.37□□□□□ -1.23
RAB5B-206ENST00000549505 IGLL1P15814 213 aa7.37□□□□□ -1.23
RAB5B-206ENST00000549505 FAM159AQ6UWV7 190 aa7.37□□□□□ -1.23
RAB5B-206ENST00000549505 LINC01006Q8NI28 216 aa7.37□□□□□ -1.23
RAB5B-206ENST00000549505 AKAP9Q99996 3911 aa7.36□□□□□ -1.23
RAB5B-206ENST00000549505 H0Y8G0 127 aa7.36□□□□□ -1.23
RAB5B-206ENST00000549505 GNRH2O43555 120 aa7.36□□□□□ -1.23
RAB5B-206ENST00000549505 DEFB1P60022 68 aa7.36□□□□□ -1.23
RAB5B-206ENST00000549505 PMCHL2Q9BQD1 86 aa7.36□□□□□ -1.23
RAB5B-206ENST00000549505 SMIM2Q9BVW6 85 aa7.36□□□□□ -1.23
RAB5B-206ENST00000549505 ANK3Q12955 4377 aaKnown RBP7.36□□□□□ -1.23
RAB5B-206ENST00000549505 TRGV11A0A075B6L2 103 aa7.36□□□□□ -1.23
RAB5B-206ENST00000549505 ADARB2-AS1A8MUL3 147 aa7.36□□□□□ -1.23
RAB5B-206ENST00000549505 SMKR1H3BMG3 65 aa7.36□□□□□ -1.23
RAB5B-206ENST00000549505 ZNF688P0C7X2 276 aa7.36□□□□□ -1.23
RAB5B-206ENST00000549505 TRAV12-1A0A0B4J245 112 aa7.36□□□□□ -1.23
RAB5B-206ENST00000549505 UFSP1Q6NVU6 142 aa7.36□□□□□ -1.23
RAB5B-206ENST00000549505 PHLDA3Q9Y5J5 127 aa7.36□□□□□ -1.23
RAB5B-206ENST00000549505 CSMD1Q96PZ7 3565 aa7.36□□□□□ -1.23
RAB5B-206ENST00000549505 NCR2O95944 276 aa7.35□□□□□ -1.23
RAB5B-206ENST00000549505 CRYBA4P53673 196 aa7.35□□□□□ -1.23
RAB5B-206ENST00000549505 LAGE3Q14657 143 aa7.35□□□□□ -1.23
RAB5B-206ENST00000549505 HIST2H2BCQ6DN03 193 aa7.35□□□□□ -1.23
RAB5B-206ENST00000549505 IL17DQ8TAD2 202 aa7.35□□□□□ -1.23
RAB5B-206ENST00000549505 IFI27L1Q96BM0 104 aa7.35□□□□□ -1.23
RAB5B-206ENST00000549505 MAP6D1Q9H9H5 199 aa7.35□□□□□ -1.23
RAB5B-206ENST00000549505 ATP5LO75964 103 aa7.35□□□□□ -1.23
RAB5B-206ENST00000549505 SRD5A1P18405 259 aa7.35□□□□□ -1.23
RAB5B-206ENST00000549505 POLR2KP53803 58 aaKnown RBP7.35□□□□□ -1.23
RAB5B-206ENST00000549505 PROK1P58294 105 aa7.35□□□□□ -1.23
RAB5B-206ENST00000549505 RPL24P83731 157 aaKnown RBP7.35□□□□□ -1.23
RAB5B-206ENST00000549505 ORMDL2Q53FV1 153 aa7.35□□□□□ -1.23
RAB5B-206ENST00000549505 TMEM61Q8N0U2 210 aa7.35□□□□□ -1.23
RAB5B-206ENST00000549505 KLHL30-AS1Q8NEE0 82 aa7.35□□□□□ -1.23
RAB5B-206ENST00000549505 TOMM6Q96B49 74 aa7.35□□□□□ -1.23
RAB5B-206ENST00000549505 MUC21A0A0G2JKD1 596 aa7.34□□□□□ -1.23
RAB5B-206ENST00000549505 MUC21A0A140T8X8 626 aa7.34□□□□□ -1.23
RAB5B-206ENST00000549505 RBMY1BA6NDE4 496 aaKnown RBP7.34□□□□□ -1.23
RAB5B-206ENST00000549505 RBMY1EA6NEQ0 496 aaKnown RBP7.34□□□□□ -1.23
RAB5B-206ENST00000549505 NUDT3O95989 172 aa7.34□□□□□ -1.23
RAB5B-206ENST00000549505 RBMY1DP0C7P1 496 aaKnown RBP7.34□□□□□ -1.23
RAB5B-206ENST00000549505 SUMO2P61956 95 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms