RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 RPL24P83731 157 aaKnown RBP10.38□□□□□ -0.75
PRPF40B-209ENST00000548825 FAM159AQ6UWV7 190 aa10.38□□□□□ -0.75
PRPF40B-209ENST00000548825 ZNF575Q86XF7 245 aa10.38□□□□□ -0.75
PRPF40B-209ENST00000548825 GAGE12BA1L429 117 aa10.38□□□□□ -0.75
PRPF40B-209ENST00000548825 DEFB112Q30KQ8 113 aa10.38□□□□□ -0.75
PRPF40B-209ENST00000548825 PEF1Q9UBV8 284 aaKnown RBP10.38□□□□□ -0.75
PRPF40B-209ENST00000548825 IGHV7-4-1A0A0J9YVY3 117 aa10.37□□□□□ -0.75
PRPF40B-209ENST00000548825 A6NDN8 102 aa10.37□□□□□ -0.75
PRPF40B-209ENST00000548825 SPINK13Q1W4C9 94 aa10.37□□□□□ -0.75
PRPF40B-209ENST00000548825 CBY1Q9Y3M2 126 aa10.37□□□□□ -0.75
PRPF40B-209ENST00000548825 IGHV3-64A0A075B6Q5 118 aa10.37□□□□□ -0.75
PRPF40B-209ENST00000548825 TRAV21A0A0B4J279 112 aa10.37□□□□□ -0.75
PRPF40B-209ENST00000548825 RNF223E7ERA6 249 aa10.37□□□□□ -0.75
PRPF40B-209ENST00000548825 DPM2O94777 84 aa10.37□□□□□ -0.75
PRPF40B-209ENST00000548825 C9orf139Q6ZV77 190 aa10.37□□□□□ -0.75
PRPF40B-209ENST00000548825 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.36□□□□□ -0.75
PRPF40B-209ENST00000548825 FXYD2P54710 66 aa10.36□□□□□ -0.75
PRPF40B-209ENST00000548825 ODF1Q14990 250 aa10.36□□□□□ -0.75
PRPF40B-209ENST00000548825 CD300EQ496F6 205 aaPredicted RBP10.36□□□□□ -0.75
PRPF40B-209ENST00000548825 C10orf105Q8TEF2 133 aa10.36□□□□□ -0.75
PRPF40B-209ENST00000548825 DPF1Q92782 380 aa10.36□□□□□ -0.75
PRPF40B-209ENST00000548825 HIST1H4GQ99525 98 aa10.36□□□□□ -0.75
PRPF40B-209ENST00000548825 A0A0G2JLM5 398 aa10.36□□□□□ -0.75
PRPF40B-209ENST00000548825 SAP30O75446 220 aa10.36□□□□□ -0.75
PRPF40B-209ENST00000548825 SCGB1D4Q6XE38 83 aa10.36□□□□□ -0.75
PRPF40B-209ENST00000548825 FASNP49327 2511 aaKnown RBP10.36□□□□□ -0.75
PRPF40B-209ENST00000548825 ITPR3Q14573 2671 aa10.36□□□□□ -0.75
PRPF40B-209ENST00000548825 CSTL1Q9H114 145 aa10.36□□□□□ -0.75
PRPF40B-209ENST00000548825 ZNF56Q15929 161 aa10.35□□□□□ -0.75
PRPF40B-209ENST00000548825 U3KQK5 164 aa10.35□□□□□ -0.75
PRPF40B-209ENST00000548825 RIPPLY3P57055 190 aa10.35□□□□□ -0.75
PRPF40B-209ENST00000548825 SRSF1Q07955 248 aaKnown RBP eCLIP10.35□□□□□ -0.75
PRPF40B-209ENST00000548825 Q8N8P6 123 aa10.35□□□□□ -0.75
PRPF40B-209ENST00000548825 DAZ1Q9NQZ3 744 aaKnown RBP10.35□□□□□ -0.75
PRPF40B-209ENST00000548825 CYSLTR1Q9Y271 337 aa10.35□□□□□ -0.75
PRPF40B-209ENST00000548825 FAM223BA6NKX1 122 aa10.35□□□□□ -0.75
PRPF40B-209ENST00000548825 GPHB5Q86YW7 130 aa10.35□□□□□ -0.75
PRPF40B-209ENST00000548825 FAM223AQ8IWN6 122 aa10.35□□□□□ -0.75
PRPF40B-209ENST00000548825 HECTD1Q9ULT8 2610 aa10.34□□□□□ -0.75
PRPF40B-209ENST00000548825 ZFAND2AQ8N6M9 145 aa10.34□□□□□ -0.75
PRPF40B-209ENST00000548825 CHAC1Q9BUX1 264 aa10.34□□□□□ -0.75
PRPF40B-209ENST00000548825 SPCS1Q9Y6A9 102 aa10.34□□□□□ -0.75
PRPF40B-209ENST00000548825 KNCNA6PVL3 124 aa10.34□□□□□ -0.75
PRPF40B-209ENST00000548825 SUMO2P61956 95 aaKnown RBP10.34□□□□□ -0.75
PRPF40B-209ENST00000548825 CST9LQ9H4G1 147 aa10.34□□□□□ -0.75
PRPF40B-209ENST00000548825 IGHV3OR16-12A0A075B7B8 117 aa10.33□□□□□ -0.76
PRPF40B-209ENST00000548825 TMEM238LA0A1B0GVL6 79 aa10.33□□□□□ -0.76
PRPF40B-209ENST00000548825 FGF6P10767 208 aa10.33□□□□□ -0.76
PRPF40B-209ENST00000548825 RPL39P62891 51 aaKnown RBP10.33□□□□□ -0.76
PRPF40B-209ENST00000548825 NDUFA4O00483 81 aa10.33□□□□□ -0.76
PRPF40B-209ENST00000548825 C9orf47Q6ZRZ4 202 aa10.33□□□□□ -0.76
PRPF40B-209ENST00000548825 BOD1L2Q8IYS8 172 aa10.33□□□□□ -0.76
PRPF40B-209ENST00000548825 MAPKAPK5-AS1Q8N8E1 139 aa10.33□□□□□ -0.76
PRPF40B-209ENST00000548825 HSD52Q0P140 79 aa10.33□□□□□ -0.76
PRPF40B-209ENST00000548825 AMTNQ6UX39 209 aa10.33□□□□□ -0.76
PRPF40B-209ENST00000548825 SMIM2Q9BVW6 85 aa10.33□□□□□ -0.76
PRPF40B-209ENST00000548825 TRBV25-1A0A075B6N4 114 aa10.32□□□□□ -0.76
PRPF40B-209ENST00000548825 A0A1W2PRX2 142 aa10.32□□□□□ -0.76
PRPF40B-209ENST00000548825 C2orf66Q6UXQ4 117 aa10.32□□□□□ -0.76
PRPF40B-209ENST00000548825 PRORYQ9H606 182 aa10.32□□□□□ -0.76
PRPF40B-209ENST00000548825 B4DSR2 109 aa10.32□□□□□ -0.76
PRPF40B-209ENST00000548825 ATP5LO75964 103 aa10.32□□□□□ -0.76
PRPF40B-209ENST00000548825 GATD1Q8NB37 220 aa10.32□□□□□ -0.76
PRPF40B-209ENST00000548825 KLHL30-AS1Q8NEE0 82 aa10.32□□□□□ -0.76
PRPF40B-209ENST00000548825 MUC4Q99102 2169 aa10.32□□□□□ -0.76
PRPF40B-209ENST00000548825 SRSF9Q13242 221 aaKnown RBP eCLIP10.32□□□□□ -0.76
PRPF40B-209ENST00000548825 TMEM170BQ5T4T1 132 aa10.32□□□□□ -0.76
PRPF40B-209ENST00000548825 NRACQ8N912 160 aa10.32□□□□□ -0.76
PRPF40B-209ENST00000548825 DPH3P1Q9H4G8 78 aa10.32□□□□□ -0.76
PRPF40B-209ENST00000548825 CHTOPQ9Y3Y2 248 aaKnown RBP10.32□□□□□ -0.76
PRPF40B-209ENST00000548825 COTL1Q14019 142 aa10.31□□□□□ -0.76
PRPF40B-209ENST00000548825 OPRPNQ99935 248 aaPredicted RBP10.31□□□□□ -0.76
PRPF40B-209ENST00000548825 MDFICQ9P1T7 246 aa10.31□□□□□ -0.76
PRPF40B-209ENST00000548825 NBEAL2Q6ZNJ1 2754 aa10.31□□□□□ -0.76
PRPF40B-209ENST00000548825 RBAKDNA6NC62 111 aa10.31□□□□□ -0.76
PRPF40B-209ENST00000548825 OR11H12B2RN74 326 aa10.31□□□□□ -0.76
PRPF40B-209ENST00000548825 OVOL1O14753 267 aa10.31□□□□□ -0.76
PRPF40B-209ENST00000548825 DUSP14O95147 198 aaKnown RBP10.31□□□□□ -0.76
PRPF40B-209ENST00000548825 IGHG2P01859 326 aa10.31□□□□□ -0.76
PRPF40B-209ENST00000548825 OR11H1Q8NG94 326 aa10.31□□□□□ -0.76
PRPF40B-209ENST00000548825 OR11H2Q8NH07 326 aa10.31□□□□□ -0.76
PRPF40B-209ENST00000548825 RASL10AQ92737 203 aa10.31□□□□□ -0.76
PRPF40B-209ENST00000548825 SMIM13P0DJ93 91 aa10.3□□□□□ -0.76
PRPF40B-209ENST00000548825 SEC11AP67812 179 aa10.3□□□□□ -0.76
PRPF40B-209ENST00000548825 TMEM190Q8WZ59 177 aa10.3□□□□□ -0.76
PRPF40B-209ENST00000548825 C18orf65Q6ZTR6 163 aa10.3□□□□□ -0.76
PRPF40B-209ENST00000548825 GTF2H5Q6ZYL4 71 aa10.3□□□□□ -0.76
PRPF40B-209ENST00000548825 MEGF9Q9H1U4 602 aa10.3□□□□□ -0.76
PRPF40B-209ENST00000548825 FABP2P12104 132 aa10.3□□□□□ -0.76
PRPF40B-209ENST00000548825 ID1P41134 155 aa10.3□□□□□ -0.76
PRPF40B-209ENST00000548825 RNASE13Q5GAN3 156 aaKnown RBP10.3□□□□□ -0.76
PRPF40B-209ENST00000548825 SAMD5Q5TGI4 173 aa10.3□□□□□ -0.76
PRPF40B-209ENST00000548825 HHLA3Q9XRX5 114 aa10.3□□□□□ -0.76
PRPF40B-209ENST00000548825 H7C2G1 150 aa10.29□□□□□ -0.76
PRPF40B-209ENST00000548825 APOMO95445 188 aa10.29□□□□□ -0.76
PRPF40B-209ENST00000548825 USMG5Q96IX5 58 aa10.29□□□□□ -0.76
PRPF40B-209ENST00000548825 SMPXQ9UHP9 88 aa10.29□□□□□ -0.76
PRPF40B-209ENST00000548825 TP53TG1Q9Y2A0 90 aa10.29□□□□□ -0.76
PRPF40B-209ENST00000548825 ITPR2Q14571 2701 aa10.29□□□□□ -0.76
PRPF40B-209ENST00000548825 A6NDX4 124 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms