RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 CBY3A6NI87 242 aa4.53□□□□□ -1.68
PRKDC-211ENST00000546304 C9JCJ5 164 aa4.53□□□□□ -1.68
PRKDC-211ENST00000546304 SH2D1AO60880 128 aa4.53□□□□□ -1.68
PRKDC-211ENST00000546304 PRM2P04554 102 aa4.53□□□□□ -1.68
PRKDC-211ENST00000546304 EMP1P54849 157 aa4.53□□□□□ -1.68
PRKDC-211ENST00000546304 ZNF415Q09FC8 603 aa4.53□□□□□ -1.68
PRKDC-211ENST00000546304 TDRG1Q3Y452 100 aa4.53□□□□□ -1.68
PRKDC-211ENST00000546304 ANXA2RQ3ZCQ2 193 aa4.53□□□□□ -1.68
PRKDC-211ENST00000546304 FAM162BQ5T6X4 162 aa4.53□□□□□ -1.68
PRKDC-211ENST00000546304 PRR27Q6MZM9 219 aa4.53□□□□□ -1.68
PRKDC-211ENST00000546304 FAM159AQ6UWV7 190 aa4.53□□□□□ -1.68
PRKDC-211ENST00000546304 ZNF493Q6ZR52 646 aa4.53□□□□□ -1.68
PRKDC-211ENST00000546304 BAGE2Q86Y30 109 aa4.53□□□□□ -1.68
PRKDC-211ENST00000546304 SMIM12Q96EX1 92 aa4.53□□□□□ -1.68
PRKDC-211ENST00000546304 SMIM7Q9BQ49 75 aa4.53□□□□□ -1.68
PRKDC-211ENST00000546304 SDF2L1Q9HCN8 221 aa4.53□□□□□ -1.68
PRKDC-211ENST00000546304 CELA1Q9UNI1 258 aa4.53□□□□□ -1.68
PRKDC-211ENST00000546304 NACAE9PAV3 2078 aa4.53□□□□□ -1.68
PRKDC-211ENST00000546304 LYSTQ99698 3801 aa4.53□□□□□ -1.68
PRKDC-211ENST00000546304 TEX48A0A1B0GUV7 120 aa4.52□□□□□ -1.69
PRKDC-211ENST00000546304 RAB19A4D1S5 217 aa4.52□□□□□ -1.69
PRKDC-211ENST00000546304 SNURFLB1AK76 121 aa4.52□□□□□ -1.69
PRKDC-211ENST00000546304 IGLV2-8P01709 118 aa4.52□□□□□ -1.69
PRKDC-211ENST00000546304 TYMSP04818 313 aa4.52□□□□□ -1.69
PRKDC-211ENST00000546304 SRP19P09132 144 aaKnown RBP4.52□□□□□ -1.69
PRKDC-211ENST00000546304 MGST1P10620 155 aaKnown RBP4.52□□□□□ -1.69
PRKDC-211ENST00000546304 AZU1P20160 251 aa4.52□□□□□ -1.69
PRKDC-211ENST00000546304 TCL1AP56279 114 aa4.52□□□□□ -1.69
PRKDC-211ENST00000546304 PEA15Q15121 130 aa4.52□□□□□ -1.69
PRKDC-211ENST00000546304 IBA57Q5T440 356 aaKnown RBP4.52□□□□□ -1.69
PRKDC-211ENST00000546304 FAM222AQ5U5X8 452 aa4.52□□□□□ -1.69
PRKDC-211ENST00000546304 C11orf72Q8NBR9 251 aa4.52□□□□□ -1.69
PRKDC-211ENST00000546304 KCNS1Q96KK3 526 aa4.52□□□□□ -1.69
PRKDC-211ENST00000546304 SMDT1Q9H4I9 107 aa4.52□□□□□ -1.69
PRKDC-211ENST00000546304 TP53TG3Q9ULZ0 132 aa4.52□□□□□ -1.69
PRKDC-211ENST00000546304 KMT2CQ8NEZ4 4911 aaKnown RBP4.52□□□□□ -1.69
PRKDC-211ENST00000546304 VPS13DQ5THJ4 4388 aa4.51□□□□□ -1.69
PRKDC-211ENST00000546304 IGKV3D-20A0A0C4DH25 116 aa4.51□□□□□ -1.69
PRKDC-211ENST00000546304 LYRM9A8MSI8 78 aa4.51□□□□□ -1.69
PRKDC-211ENST00000546304 FABP5P3A8MUU1 101 aa4.51□□□□□ -1.69
PRKDC-211ENST00000546304 ZNF727A8MUV8 499 aa4.51□□□□□ -1.69
PRKDC-211ENST00000546304 B4DEV8 164 aa4.51□□□□□ -1.69
PRKDC-211ENST00000546304 C9JQL5 133 aa4.51□□□□□ -1.69
PRKDC-211ENST00000546304 M0R036 132 aa4.51□□□□□ -1.69
PRKDC-211ENST00000546304 SPART-AS1P0CW21 52 aa4.51□□□□□ -1.69
PRKDC-211ENST00000546304 CRIP1P50238 77 aa4.51□□□□□ -1.69
PRKDC-211ENST00000546304 C11orf45Q8TAV5 145 aa4.51□□□□□ -1.69
PRKDC-211ENST00000546304 BIN3Q9NQY0 253 aa4.51□□□□□ -1.69
PRKDC-211ENST00000546304 GSN-AS1Q9NRJ2 163 aa4.51□□□□□ -1.69
PRKDC-211ENST00000546304 TIMM8BQ9Y5J9 83 aaPredicted RBP4.51□□□□□ -1.69
PRKDC-211ENST00000546304 TMSB15BA0A087X1C1 80 aa4.5□□□□□ -1.69
PRKDC-211ENST00000546304 IGHV3-16A0A0C4DH30 117 aa4.5□□□□□ -1.69
PRKDC-211ENST00000546304 CXorf65A6NEN9 183 aa4.5□□□□□ -1.69
PRKDC-211ENST00000546304 H3BVH4 76 aa4.5□□□□□ -1.69
PRKDC-211ENST00000546304 K7EN84 100 aa4.5□□□□□ -1.69
PRKDC-211ENST00000546304 ORM1P02763 201 aa4.5□□□□□ -1.69
PRKDC-211ENST00000546304 SFTA3P0C7M3 94 aa4.5□□□□□ -1.69
PRKDC-211ENST00000546304 BTF3P20290 206 aaKnown RBP4.5□□□□□ -1.69
PRKDC-211ENST00000546304 ASIPP42127 132 aa4.5□□□□□ -1.69
PRKDC-211ENST00000546304 NANOS2P60321 138 aaKnown RBP4.5□□□□□ -1.69
PRKDC-211ENST00000546304 RPL19P84098 196 aaKnown RBP4.5□□□□□ -1.69
PRKDC-211ENST00000546304 DAZ2Q13117 558 aaKnown RBP4.5□□□□□ -1.69
PRKDC-211ENST00000546304 OR5I1Q13606 314 aa4.5□□□□□ -1.69
PRKDC-211ENST00000546304 FAM74A3Q4VXF1 159 aa4.5□□□□□ -1.69
PRKDC-211ENST00000546304 Q6ZTC4 211 aa4.5□□□□□ -1.69
PRKDC-211ENST00000546304 LINC01551Q86U37 167 aa4.5□□□□□ -1.69
PRKDC-211ENST00000546304 COMMD7Q86VX2 200 aa4.5□□□□□ -1.69
PRKDC-211ENST00000546304 MUC7Q8TAX7 377 aa4.5□□□□□ -1.69
PRKDC-211ENST00000546304 NOP10Q9NPE3 64 aaKnown RBP4.5□□□□□ -1.69
PRKDC-211ENST00000546304 MDFICQ9P1T7 246 aa4.5□□□□□ -1.69
PRKDC-211ENST00000546304 LY96Q9Y6Y9 160 aa4.5□□□□□ -1.69
PRKDC-211ENST00000546304 TRGV1A0A0A0MS02 117 aa4.49□□□□□ -1.69
PRKDC-211ENST00000546304 C19orf71A6NCJ1 209 aa4.49□□□□□ -1.69
PRKDC-211ENST00000546304 KRBOX1C9JBD0 128 aa4.49□□□□□ -1.69
PRKDC-211ENST00000546304 GNRH2O43555 120 aa4.49□□□□□ -1.69
PRKDC-211ENST00000546304 P01737 135 aa4.49□□□□□ -1.69
PRKDC-211ENST00000546304 CXCL1P09341 107 aa4.49□□□□□ -1.69
PRKDC-211ENST00000546304 DEFB130BP0DP73 79 aa4.49□□□□□ -1.69
PRKDC-211ENST00000546304 DEFB130AP0DP74 79 aa4.49□□□□□ -1.69
PRKDC-211ENST00000546304 S100A4P26447 101 aaKnown RBP4.49□□□□□ -1.69
PRKDC-211ENST00000546304 DAD1P61803 113 aa4.49□□□□□ -1.69
PRKDC-211ENST00000546304 C12orf74Q32Q52 190 aa4.49□□□□□ -1.69
PRKDC-211ENST00000546304 SOHLH1Q5JUK2 328 aa4.49□□□□□ -1.69
PRKDC-211ENST00000546304 UQCC3Q6UW78 93 aa4.49□□□□□ -1.69
PRKDC-211ENST00000546304 Q6ZTI0 123 aa4.49□□□□□ -1.69
PRKDC-211ENST00000546304 LINC00612Q8N6U2 182 aa4.49□□□□□ -1.69
PRKDC-211ENST00000546304 DAZAP1Q96EP5 407 aaKnown RBP4.49□□□□□ -1.69
PRKDC-211ENST00000546304 C9orf85Q96MD7 179 aa4.49□□□□□ -1.69
PRKDC-211ENST00000546304 MRPL16Q9NX20 251 aaKnown RBP4.49□□□□□ -1.69
PRKDC-211ENST00000546304 NAT8Q9UHE5 227 aa4.49□□□□□ -1.69
PRKDC-211ENST00000546304 RYR2Q92736 4967 aa4.48□□□□□ -1.69
PRKDC-211ENST00000546304 DNAH6Q9C0G6 4158 aa4.48□□□□□ -1.69
PRKDC-211ENST00000546304 GRIFINA4D1Z8 144 aa4.48□□□□□ -1.69
PRKDC-211ENST00000546304 LINC00862A6NCI5 91 aa4.48□□□□□ -1.69
PRKDC-211ENST00000546304 NUPR2A6NF83 97 aa4.48□□□□□ -1.69
PRKDC-211ENST00000546304 M0R2P5 195 aa4.48□□□□□ -1.69
PRKDC-211ENST00000546304 SPINK4O60575 86 aa4.48□□□□□ -1.69
PRKDC-211ENST00000546304 GAGE7O76087 117 aa4.48□□□□□ -1.69
PRKDC-211ENST00000546304 GAGE12FP0CL80 117 aa4.48□□□□□ -1.69
PRKDC-211ENST00000546304 GAGE12GP0CL81 117 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms