RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 LINC01587Q99440 93 aa14.23□□□□□ -0.13
SKP2-208ENST00000546211 MSRB1Q9NZV6 116 aa14.23□□□□□ -0.13
SKP2-208ENST00000546211 SNRPEP62304 92 aaKnown RBP14.22□□□□□ -0.13
SKP2-208ENST00000546211 TMEM208Q9BTX3 173 aa14.22□□□□□ -0.13
SKP2-208ENST00000546211 C1QTNF4Q9BXJ3 329 aa14.22□□□□□ -0.13
SKP2-208ENST00000546211 TMEM191AQ9H0A3 160 aa14.22□□□□□ -0.13
SKP2-208ENST00000546211 LOC102724200A0A096LPH7 203 aaPredicted RBP14.22□□□□□ -0.13
SKP2-208ENST00000546211 HTN1P15515 57 aa14.22□□□□□ -0.13
SKP2-208ENST00000546211 SRIP30626 198 aa14.22□□□□□ -0.13
SKP2-208ENST00000546211 TMEM256Q8N2U0 113 aa14.22□□□□□ -0.13
SKP2-208ENST00000546211 LINC00467Q9BRT7 94 aa14.22□□□□□ -0.13
SKP2-208ENST00000546211 C5orf52A6NGY3 159 aa14.21□□□□□ -0.14
SKP2-208ENST00000546211 M0R381 172 aa14.21□□□□□ -0.14
SKP2-208ENST00000546211 FAM104BQ5XKR9 115 aa14.21□□□□□ -0.14
SKP2-208ENST00000546211 C9orf85Q96MD7 179 aa14.2□□□□□ -0.14
SKP2-208ENST00000546211 MDFICQ9P1T7 246 aa14.2□□□□□ -0.14
SKP2-208ENST00000546211 SPRY2O43597 315 aa14.19□□□□□ -0.14
SKP2-208ENST00000546211 AMN1Q8IY45 258 aa14.19□□□□□ -0.14
SKP2-208ENST00000546211 LOC105371267A0A1B0GV96 52 aa14.18□□□□□ -0.14
SKP2-208ENST00000546211 DMRTA1Q5VZB9 504 aa14.18□□□□□ -0.14
SKP2-208ENST00000546211 C1orf158Q8N1D5 194 aa14.18□□□□□ -0.14
SKP2-208ENST00000546211 ALKBH7Q9BT30 221 aaPredicted RBP14.18□□□□□ -0.14
SKP2-208ENST00000546211 GOLT1BQ9Y3E0 138 aa14.18□□□□□ -0.14
SKP2-208ENST00000546211 IGHV3OR16-12A0A075B7B8 117 aa14.17□□□□□ -0.14
SKP2-208ENST00000546211 NXPH4O95158 308 aa14.17□□□□□ -0.14
SKP2-208ENST00000546211 ZNF415Q09FC8 603 aa14.17□□□□□ -0.14
SKP2-208ENST00000546211 OR10J3Q5JRS4 329 aa14.17□□□□□ -0.14
SKP2-208ENST00000546211 GIG44P09565 113 aaPredicted RBP14.17□□□□□ -0.14
SKP2-208ENST00000546211 EVI2AP22794 236 aa14.17□□□□□ -0.14
SKP2-208ENST00000546211 Q0VG73 95 aa14.17□□□□□ -0.14
SKP2-208ENST00000546211 OXLD1Q5BKU9 147 aa14.17□□□□□ -0.14
SKP2-208ENST00000546211 COA6Q5JTJ3 125 aaKnown RBP14.17□□□□□ -0.14
SKP2-208ENST00000546211 SYT8Q8NBV8 401 aa14.17□□□□□ -0.14
SKP2-208ENST00000546211 HOXA5P20719 270 aa14.16□□□□□ -0.14
SKP2-208ENST00000546211 MRPL51Q4U2R6 128 aaKnown RBP14.16□□□□□ -0.14
SKP2-208ENST00000546211 BAGE3Q86Y29 109 aa14.16□□□□□ -0.14
SKP2-208ENST00000546211 AP1S3Q96PC3 154 aa14.16□□□□□ -0.14
SKP2-208ENST00000546211 CSTL1Q9H114 145 aa14.16□□□□□ -0.14
SKP2-208ENST00000546211 ZMAT5Q9UDW3 170 aaKnown RBP14.16□□□□□ -0.14
SKP2-208ENST00000546211 UBE2CO00762 179 aa14.15□□□□□ -0.14
SKP2-208ENST00000546211 RAB4AP20338 218 aa14.15□□□□□ -0.14
SKP2-208ENST00000546211 VWFP04275 2813 aa14.15□□□□□ -0.14
SKP2-208ENST00000546211 PRM2P04554 102 aa14.13□□□□□ -0.15
SKP2-208ENST00000546211 ORMDL3Q8N138 153 aa14.13□□□□□ -0.15
SKP2-208ENST00000546211 C18orf32Q8TCD1 76 aa14.13□□□□□ -0.15
SKP2-208ENST00000546211 RNF185Q96GF1 192 aa14.13□□□□□ -0.15
SKP2-208ENST00000546211 DPH3P1Q9H4G8 78 aa14.13□□□□□ -0.15
SKP2-208ENST00000546211 D6R8Y8 96 aa14.13□□□□□ -0.15
SKP2-208ENST00000546211 CKS2P33552 79 aa14.13□□□□□ -0.15
SKP2-208ENST00000546211 CSNK1G2-AS1Q8NCQ2 148 aa14.13□□□□□ -0.15
SKP2-208ENST00000546211 RCHY1Q96PM5 261 aa14.13□□□□□ -0.15
SKP2-208ENST00000546211 PPBPP02775 128 aa14.12□□□□□ -0.15
SKP2-208ENST00000546211 SMIM17P0DL12 118 aa14.12□□□□□ -0.15
SKP2-208ENST00000546211 ZNF876PQ49A33 203 aa14.12□□□□□ -0.15
SKP2-208ENST00000546211 C14orf178Q8N769 122 aaPredicted RBP14.12□□□□□ -0.15
SKP2-208ENST00000546211 SPXQ9BT56 116 aa14.12□□□□□ -0.15
SKP2-208ENST00000546211 GSN-AS1Q9NRJ2 163 aa14.12□□□□□ -0.15
SKP2-208ENST00000546211 U3KQK5 164 aa14.12□□□□□ -0.15
SKP2-208ENST00000546211 EGFEM1PQ0D2K5 195 aa14.11□□□□□ -0.15
SKP2-208ENST00000546211 IQCJQ1A5X6 159 aa14.11□□□□□ -0.15
SKP2-208ENST00000546211 C11orf72Q8NBR9 251 aa14.11□□□□□ -0.15
SKP2-208ENST00000546211 PRELID3AQ96N28 172 aa14.11□□□□□ -0.15
SKP2-208ENST00000546211 KIR2DL5BA0A0G2JN68 375 aa14.1□□□□□ -0.15
SKP2-208ENST00000546211 KIR2DL5BA0A0G2JPC4 375 aa14.1□□□□□ -0.15
SKP2-208ENST00000546211 AZU1P20160 251 aa14.1□□□□□ -0.15
SKP2-208ENST00000546211 S100A2P29034 98 aa14.1□□□□□ -0.15
SKP2-208ENST00000546211 APOC4P55056 127 aa14.1□□□□□ -0.15
SKP2-208ENST00000546211 PDZD11Q5EBL8 140 aa14.1□□□□□ -0.15
SKP2-208ENST00000546211 KIR2DL5AQ8N109 375 aa14.1□□□□□ -0.15
SKP2-208ENST00000546211 HIST3H2BBQ8N257 126 aa14.1□□□□□ -0.15
SKP2-208ENST00000546211 KIR2DL5BQ8NHK3 375 aa14.1□□□□□ -0.15
SKP2-208ENST00000546211 M0R2P5 195 aa14.09□□□□□ -0.15
SKP2-208ENST00000546211 ZNF705AQ6ZN79 300 aaPredicted RBP14.09□□□□□ -0.15
SKP2-208ENST00000546211 TMEM263Q8WUH6 116 aaKnown RBP14.09□□□□□ -0.15
SKP2-208ENST00000546211 MDFIQ99750 246 aa14.09□□□□□ -0.15
SKP2-208ENST00000546211 SMKR1H3BMG3 65 aa14.09□□□□□ -0.15
SKP2-208ENST00000546211 SERF1AO75920 110 aa14.09□□□□□ -0.15
SKP2-208ENST00000546211 NCR2O95944 276 aa14.09□□□□□ -0.15
SKP2-208ENST00000546211 MGPP08493 103 aa14.09□□□□□ -0.15
SKP2-208ENST00000546211 KRTAP10-11P60412 298 aa14.09□□□□□ -0.15
SKP2-208ENST00000546211 PTH2Q96A98 100 aa14.09□□□□□ -0.15
SKP2-208ENST00000546211 MRAP2Q96G30 205 aa14.09□□□□□ -0.15
SKP2-208ENST00000546211 NOTCH3Q9UM47 2321 aa14.08□□□□□ -0.16
SKP2-208ENST00000546211 PIK3CD-AS1Q5SR53 167 aa14.08□□□□□ -0.16
SKP2-208ENST00000546211 RNASE8Q8TDE3 154 aaKnown RBP14.08□□□□□ -0.16
SKP2-208ENST00000546211 JPT2Q9H910 190 aa14.08□□□□□ -0.16
SKP2-208ENST00000546211 LAMTOR2Q9Y2Q5 125 aa14.08□□□□□ -0.16
SKP2-208ENST00000546211 TRRAPQ9Y4A5 3859 aa14.07□□□□□ -0.16
SKP2-208ENST00000546211 MUC4Q99102 2169 aa14.07□□□□□ -0.16
SKP2-208ENST00000546211 IGHV4-30-4P0DP06 118 aa14.07□□□□□ -0.16
SKP2-208ENST00000546211 RRN3P1Q2M238 152 aa14.07□□□□□ -0.16
SKP2-208ENST00000546211 C16orf74Q96GX8 76 aa14.07□□□□□ -0.16
SKP2-208ENST00000546211 KIF25-AS1Q9Y6Z4 181 aa14.07□□□□□ -0.16
SKP2-208ENST00000546211 STAB1Q9NY15 2570 aa14.07□□□□□ -0.16
SKP2-208ENST00000546211 A0A087WWL8 130 aa14.06□□□□□ -0.16
SKP2-208ENST00000546211 ESDP10768 282 aa14.06□□□□□ -0.16
SKP2-208ENST00000546211 LINC00310P59036 64 aa14.06□□□□□ -0.16
SKP2-208ENST00000546211 NUPR1O60356 82 aa14.05□□□□□ -0.16
SKP2-208ENST00000546211 TRAV26-2A0A0B4J265 109 aa14.05□□□□□ -0.16
SKP2-208ENST00000546211 G3V4G9 280 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms