RNA–Protein interactions for RNA: ENST00000546000.1

CADM1-220, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CADM1, Length 734 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-220ENST00000546000 S100A1P23297 94 aa12.2□□□□□ -0.46
CADM1-220ENST00000546000 CTRLP40313 264 aa12.2□□□□□ -0.46
CADM1-220ENST00000546000 FAM3BP58499 235 aaPredicted RBP12.2□□□□□ -0.46
CADM1-220ENST00000546000 DNLZQ5SXM8 178 aa12.2□□□□□ -0.46
CADM1-220ENST00000546000 TMEM88Q6PEY1 159 aa12.2□□□□□ -0.46
CADM1-220ENST00000546000 NUP35Q8NFH5 326 aa12.2□□□□□ -0.46
CADM1-220ENST00000546000 CTDSP1Q9GZU7 261 aa12.2□□□□□ -0.46
CADM1-220ENST00000546000 NOP10Q9NPE3 64 aaKnown RBP12.2□□□□□ -0.46
CADM1-220ENST00000546000 CELA1Q9UNI1 258 aa12.2□□□□□ -0.46
CADM1-220ENST00000546000 URGCP-MRPS24S4R325 110 aa12.2□□□□□ -0.46
CADM1-220ENST00000546000 SNAI2O43623 268 aa12.19□□□□□ -0.46
CADM1-220ENST00000546000 MIFP14174 115 aa12.19□□□□□ -0.46
CADM1-220ENST00000546000 SCRT2Q9NQ03 307 aa12.19□□□□□ -0.46
CADM1-220ENST00000546000 MUC4Q99102 2169 aa12.18□□□□□ -0.46
CADM1-220ENST00000546000 SMIM9A6NGZ8 99 aa12.18□□□□□ -0.46
CADM1-220ENST00000546000 SNURFLB1AK76 121 aa12.18□□□□□ -0.46
CADM1-220ENST00000546000 M0R381 172 aa12.18□□□□□ -0.46
CADM1-220ENST00000546000 A0A0J9YWU9 116 aa12.17□□□□□ -0.46
CADM1-220ENST00000546000 MED14OSP0DP75 135 aa12.17□□□□□ -0.46
CADM1-220ENST00000546000 ZNF493Q6ZR52 646 aa12.17□□□□□ -0.46
CADM1-220ENST00000546000 Q6ZTI0 123 aa12.17□□□□□ -0.46
CADM1-220ENST00000546000 SSBP4Q9BWG4 385 aaPredicted RBP12.17□□□□□ -0.46
CADM1-220ENST00000546000 GFRA4Q9GZZ7 299 aa12.17□□□□□ -0.46
CADM1-220ENST00000546000 ZMAT4Q9H898 229 aa12.17□□□□□ -0.46
CADM1-220ENST00000546000 MSRB1Q9NZV6 116 aa12.17□□□□□ -0.46
CADM1-220ENST00000546000 TRGV1A0A0A0MS02 117 aa12.16□□□□□ -0.46
CADM1-220ENST00000546000 OR5AL1P0C617 328 aa12.16□□□□□ -0.46
CADM1-220ENST00000546000 FAM222AQ5U5X8 452 aa12.16□□□□□ -0.46
CADM1-220ENST00000546000 DMRTA1Q5VZB9 504 aa12.16□□□□□ -0.46
CADM1-220ENST00000546000 MRPL54Q6P161 138 aaKnown RBP12.16□□□□□ -0.46
CADM1-220ENST00000546000 JPT2Q9H910 190 aa12.16□□□□□ -0.46
CADM1-220ENST00000546000 NAT8BQ9UHF3 227 aa12.16□□□□□ -0.46
CADM1-220ENST00000546000 PHLDA3Q9Y5J5 127 aa12.16□□□□□ -0.46
CADM1-220ENST00000546000 A0A1W2PPQ1 181 aa12.15□□□□□ -0.46
CADM1-220ENST00000546000 GAGE12BA1L429 117 aa12.15□□□□□ -0.46
CADM1-220ENST00000546000 GAGE7O76087 117 aa12.15□□□□□ -0.46
CADM1-220ENST00000546000 GAGE12FP0CL80 117 aa12.15□□□□□ -0.46
CADM1-220ENST00000546000 GAGE12GP0CL81 117 aa12.15□□□□□ -0.46
CADM1-220ENST00000546000 GAGE12IP0CL82 117 aa12.15□□□□□ -0.46
CADM1-220ENST00000546000 COL7A1Q02388 2944 aa12.15□□□□□ -0.46
CADM1-220ENST00000546000 M0R2P5 195 aa12.14□□□□□ -0.47
CADM1-220ENST00000546000 NXPH4O95158 308 aa12.14□□□□□ -0.47
CADM1-220ENST00000546000 FOXA3P55318 350 aaPredicted RBP12.14□□□□□ -0.47
CADM1-220ENST00000546000 SPANXN1Q5VSR9 72 aa12.14□□□□□ -0.47
CADM1-220ENST00000546000 TMEM242Q9NWH2 141 aa12.14□□□□□ -0.47
CADM1-220ENST00000546000 TGIF2-C20orf24A0A0A6YYL0 155 aa12.13□□□□□ -0.47
CADM1-220ENST00000546000 FAM231BA6NCW3 169 aa12.13□□□□□ -0.47
CADM1-220ENST00000546000 DAZ2Q13117 558 aaKnown RBP12.13□□□□□ -0.47
CADM1-220ENST00000546000 ZNF876PQ49A33 203 aa12.13□□□□□ -0.47
CADM1-220ENST00000546000 ZFP82Q8N141 532 aa12.13□□□□□ -0.47
CADM1-220ENST00000546000 YPEL4Q96NS1 127 aa12.13□□□□□ -0.47
CADM1-220ENST00000546000 SPXQ9BT56 116 aa12.13□□□□□ -0.47
CADM1-220ENST00000546000 C11orf68Q9H3H3 251 aaKnown RBP12.13□□□□□ -0.47
CADM1-220ENST00000546000 DKK2Q9UBU2 259 aa12.13□□□□□ -0.47
CADM1-220ENST00000546000 IGHV3-53P01767 116 aa12.12□□□□□ -0.47
CADM1-220ENST00000546000 DEFB130BP0DP73 79 aa12.12□□□□□ -0.47
CADM1-220ENST00000546000 DEFB130AP0DP74 79 aa12.12□□□□□ -0.47
CADM1-220ENST00000546000 NTF3P20783 257 aa12.12□□□□□ -0.47
CADM1-220ENST00000546000 TWIST1Q15672 202 aa12.12□□□□□ -0.47
CADM1-220ENST00000546000 KCNIP4Q6PIL6 250 aa12.12□□□□□ -0.47
CADM1-220ENST00000546000 IMMP2LQ96T52 175 aa12.12□□□□□ -0.47
CADM1-220ENST00000546000 CNFNQ9BYD5 112 aa12.12□□□□□ -0.47
CADM1-220ENST00000546000 SAMD10Q9BYL1 202 aa12.12□□□□□ -0.47
CADM1-220ENST00000546000 A0A1B0GUT8 65 aa12.11□□□□□ -0.47
CADM1-220ENST00000546000 A0A1B0GXF2 115 aa12.11□□□□□ -0.47
CADM1-220ENST00000546000 F2Z2F3 143 aa12.11□□□□□ -0.47
CADM1-220ENST00000546000 S100PP25815 95 aa12.11□□□□□ -0.47
CADM1-220ENST00000546000 ELOBQ15370 118 aa12.11□□□□□ -0.47
CADM1-220ENST00000546000 SMCO4Q9NRQ5 59 aa12.11□□□□□ -0.47
CADM1-220ENST00000546000 A0A087WWL8 130 aa12.1□□□□□ -0.47
CADM1-220ENST00000546000 IGHV3-73A0A0B4J1V6 119 aa12.1□□□□□ -0.47
CADM1-220ENST00000546000 CAMPP49913 170 aa12.1□□□□□ -0.47
CADM1-220ENST00000546000 CACNG7P62955 275 aa12.1□□□□□ -0.47
CADM1-220ENST00000546000 LINC00612Q8N6U2 182 aa12.1□□□□□ -0.47
CADM1-220ENST00000546000 POM121L12Q8N7R1 296 aa12.1□□□□□ -0.47
CADM1-220ENST00000546000 SYT8Q8NBV8 401 aa12.1□□□□□ -0.47
CADM1-220ENST00000546000 BORCS7Q96B45 105 aa12.1□□□□□ -0.47
CADM1-220ENST00000546000 IGHV4-4A0A075B6R2 117 aa12.09□□□□□ -0.47
CADM1-220ENST00000546000 BTF3L4Q96K17 158 aa12.09□□□□□ -0.47
CADM1-220ENST00000546000 CXorf65A6NEN9 183 aa12.08□□□□□ -0.48
CADM1-220ENST00000546000 LYRM9A8MSI8 78 aa12.08□□□□□ -0.48
CADM1-220ENST00000546000 NHLRC4P0CG21 123 aaPredicted RBP12.08□□□□□ -0.48
CADM1-220ENST00000546000 EVI2AP22794 236 aa12.08□□□□□ -0.48
CADM1-220ENST00000546000 NANOS2P60321 138 aaKnown RBP12.08□□□□□ -0.48
CADM1-220ENST00000546000 RIGQ13278 110 aa12.08□□□□□ -0.48
CADM1-220ENST00000546000 C14orf178Q8N769 122 aaPredicted RBP12.08□□□□□ -0.48
CADM1-220ENST00000546000 RASL10AQ92737 203 aa12.08□□□□□ -0.48
CADM1-220ENST00000546000 PTH2Q96A98 100 aa12.08□□□□□ -0.48
CADM1-220ENST00000546000 TRGV2A0A075B6R0 118 aa12.07□□□□□ -0.48
CADM1-220ENST00000546000 SPART-AS1P0CW21 52 aa12.07□□□□□ -0.48
CADM1-220ENST00000546000 DAD1P61803 113 aa12.07□□□□□ -0.48
CADM1-220ENST00000546000 HBBP68871 147 aa12.07□□□□□ -0.48
CADM1-220ENST00000546000 C12orf74Q32Q52 190 aa12.07□□□□□ -0.48
CADM1-220ENST00000546000 LGALS9BQ3B8N2 356 aa12.07□□□□□ -0.48
CADM1-220ENST00000546000 FAM74A4Q5TZK3 123 aa12.07□□□□□ -0.48
CADM1-220ENST00000546000 CFAP126Q5VTH2 177 aa12.07□□□□□ -0.48
CADM1-220ENST00000546000 WDR73Q6P4I2 378 aa12.07□□□□□ -0.48
CADM1-220ENST00000546000 ZNF479Q96JC4 524 aa12.07□□□□□ -0.48
CADM1-220ENST00000546000 AP1S3Q96PC3 154 aa12.07□□□□□ -0.48
CADM1-220ENST00000546000 NACAE9PAV3 2078 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms