RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 CREBBPQ92793 2442 aa14.31□□□□□ -0.12
MSLN-202ENST00000545450 TRBV7-3A0A075B6L6 115 aa14.31□□□□□ -0.12
MSLN-202ENST00000545450 A0A1B0GWB2 263 aa14.31□□□□□ -0.12
MSLN-202ENST00000545450 GAGE12HA6NDE8 117 aa14.31□□□□□ -0.12
MSLN-202ENST00000545450 H3BMG7 143 aa14.31□□□□□ -0.12
MSLN-202ENST00000545450 J3QR89 54 aa14.31□□□□□ -0.12
MSLN-202ENST00000545450 TRAV12-1A0A0B4J245 112 aa14.3□□□□□ -0.12
MSLN-202ENST00000545450 IGHV4-31P0DP07 118 aa14.3□□□□□ -0.12
MSLN-202ENST00000545450 ECSCRQ19T08 205 aa14.3□□□□□ -0.12
MSLN-202ENST00000545450 HIST1H4GQ99525 98 aa14.3□□□□□ -0.12
MSLN-202ENST00000545450 TSSC4Q9Y5U2 329 aaPredicted RBP14.3□□□□□ -0.12
MSLN-202ENST00000545450 CLPSL1A2RUU4 121 aa14.3□□□□□ -0.12
MSLN-202ENST00000545450 RRN3P1Q2M238 152 aa14.3□□□□□ -0.12
MSLN-202ENST00000545450 H3BUX3 64 aa14.29□□□□□ -0.12
MSLN-202ENST00000545450 H7C1H1 209 aa14.29□□□□□ -0.12
MSLN-202ENST00000545450 LY6EQ16553 131 aa14.29□□□□□ -0.12
MSLN-202ENST00000545450 KLK9Q2XQG4 91 aa14.29□□□□□ -0.12
MSLN-202ENST00000545450 C15orf32Q32M92 178 aa14.29□□□□□ -0.12
MSLN-202ENST00000545450 Q96MF0 132 aa14.29□□□□□ -0.12
MSLN-202ENST00000545450 KLK9Q9UKQ9 250 aa14.29□□□□□ -0.12
MSLN-202ENST00000545450 UFC1Q9Y3C8 167 aa14.29□□□□□ -0.12
MSLN-202ENST00000545450 TEX15Q9BXT5 2789 aa14.29□□□□□ -0.12
MSLN-202ENST00000545450 TRAV8-2A0A0B4J237 113 aa14.29□□□□□ -0.12
MSLN-202ENST00000545450 F8VRH5 84 aa14.29□□□□□ -0.12
MSLN-202ENST00000545450 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.29□□□□□ -0.12
MSLN-202ENST00000545450 TMEM78Q5T7P6 136 aa14.29□□□□□ -0.12
MSLN-202ENST00000545450 MRPL53Q96EL3 112 aaKnown RBP14.29□□□□□ -0.12
MSLN-202ENST00000545450 SPATA25Q9BR10 227 aa14.29□□□□□ -0.12
MSLN-202ENST00000545450 PRO0461Q9UI25 63 aa14.29□□□□□ -0.12
MSLN-202ENST00000545450 PRRC2AP48634 2157 aaKnown RBP14.29□□□□□ -0.12
MSLN-202ENST00000545450 G3V318 75 aa14.28□□□□□ -0.12
MSLN-202ENST00000545450 ZNF207O43670 478 aaKnown RBP14.28□□□□□ -0.12
MSLN-202ENST00000545450 CLEC3BP05452 202 aa14.28□□□□□ -0.12
MSLN-202ENST00000545450 FAM110DQ8TAY7 271 aaPredicted RBP14.28□□□□□ -0.12
MSLN-202ENST00000545450 SPAG8Q99932 426 aaPredicted RBP14.28□□□□□ -0.12
MSLN-202ENST00000545450 J3QLI3 93 aa14.27□□□□□ -0.12
MSLN-202ENST00000545450 ETDBQ3ZM63 59 aa14.27□□□□□ -0.12
MSLN-202ENST00000545450 SPANXN1Q5VSR9 72 aa14.27□□□□□ -0.12
MSLN-202ENST00000545450 C9orf47Q6ZRZ4 202 aa14.27□□□□□ -0.12
MSLN-202ENST00000545450 SH2D6Q7Z4S9 175 aa14.27□□□□□ -0.12
MSLN-202ENST00000545450 MRAP2Q96G30 205 aa14.27□□□□□ -0.12
MSLN-202ENST00000545450 ITPR3Q14573 2671 aa14.27□□□□□ -0.13
MSLN-202ENST00000545450 GCN1Q92616 2671 aaKnown RBP14.27□□□□□ -0.13
MSLN-202ENST00000545450 IGHV3-66A0A0C4DH42 116 aa14.27□□□□□ -0.13
MSLN-202ENST00000545450 A6NDX4 124 aa14.27□□□□□ -0.13
MSLN-202ENST00000545450 SMAGPQ0VAQ4 97 aa14.27□□□□□ -0.13
MSLN-202ENST00000545450 GAGE13Q4V321 117 aa14.27□□□□□ -0.13
MSLN-202ENST00000545450 AMTNQ6UX39 209 aa14.27□□□□□ -0.13
MSLN-202ENST00000545450 SMIM2Q9BVW6 85 aa14.27□□□□□ -0.13
MSLN-202ENST00000545450 MYMXA0A1B0GTQ4 84 aa14.26□□□□□ -0.13
MSLN-202ENST00000545450 PDZD2O15018 2839 aa14.26□□□□□ -0.13
MSLN-202ENST00000545450 OR11H12B2RN74 326 aa14.25□□□□□ -0.13
MSLN-202ENST00000545450 Q6ZQT7 251 aa14.25□□□□□ -0.13
MSLN-202ENST00000545450 OR11H1Q8NG94 326 aa14.25□□□□□ -0.13
MSLN-202ENST00000545450 OR11H2Q8NH07 326 aa14.25□□□□□ -0.13
MSLN-202ENST00000545450 TOMM6Q96B49 74 aa14.24□□□□□ -0.13
MSLN-202ENST00000545450 MXRA5Q9NR99 2828 aa14.24□□□□□ -0.13
MSLN-202ENST00000545450 ITPR2Q14571 2701 aa14.24□□□□□ -0.13
MSLN-202ENST00000545450 ORMDL2Q53FV1 153 aa14.24□□□□□ -0.13
MSLN-202ENST00000545450 C8orf86Q6ZUL3 223 aa14.24□□□□□ -0.13
MSLN-202ENST00000545450 NEXN-AS1Q8NBZ9 246 aa14.24□□□□□ -0.13
MSLN-202ENST00000545450 CCDC140Q96MF4 163 aa14.24□□□□□ -0.13
MSLN-202ENST00000545450 CCDC168Q8NDH2 2452 aa14.24□□□□□ -0.13
MSLN-202ENST00000545450 DEFB112Q30KQ8 113 aa14.23□□□□□ -0.13
MSLN-202ENST00000545450 LINC00527Q9UJ94 153 aa14.23□□□□□ -0.13
MSLN-202ENST00000545450 IGHV3OR16-13A0A075B7E8 117 aa14.23□□□□□ -0.13
MSLN-202ENST00000545450 IGHV3-74A0A0B4J1X5 117 aa14.23□□□□□ -0.13
MSLN-202ENST00000545450 C19orf54Q5BKX5 351 aa14.23□□□□□ -0.13
MSLN-202ENST00000545450 MORN3Q6PF18 240 aaPredicted RBP14.23□□□□□ -0.13
MSLN-202ENST00000545450 SCGB3A1Q96QR1 104 aa14.23□□□□□ -0.13
MSLN-202ENST00000545450 H3BVH4 76 aa14.22□□□□□ -0.13
MSLN-202ENST00000545450 FSHBP01225 129 aa14.22□□□□□ -0.13
MSLN-202ENST00000545450 CLEC19AQ6UXS0 136 aa14.22□□□□□ -0.13
MSLN-202ENST00000545450 AGRNO00468 2067 aa14.22□□□□□ -0.13
MSLN-202ENST00000545450 LGALS1P09382 135 aaKnown RBP14.22□□□□□ -0.13
MSLN-202ENST00000545450 C20orf78Q9BR46 151 aa14.22□□□□□ -0.13
MSLN-202ENST00000545450 U3KQE9 123 aa14.22□□□□□ -0.13
MSLN-202ENST00000545450 HOXA3O43365 443 aaPredicted RBP14.21□□□□□ -0.13
MSLN-202ENST00000545450 CRIP2P52943 208 aaPredicted RBP14.21□□□□□ -0.13
MSLN-202ENST00000545450 SUMO2P61956 95 aaKnown RBP14.21□□□□□ -0.13
MSLN-202ENST00000545450 WFDC11Q8NEX6 87 aa14.21□□□□□ -0.13
MSLN-202ENST00000545450 METTL26Q96S19 204 aa14.21□□□□□ -0.13
MSLN-202ENST00000545450 TRAV41A0A0B4J266 112 aa14.2□□□□□ -0.14
MSLN-202ENST00000545450 BLCAPP62952 87 aa14.2□□□□□ -0.14
MSLN-202ENST00000545450 RASL10AQ92737 203 aa14.2□□□□□ -0.14
MSLN-202ENST00000545450 CYSLTR1Q9Y271 337 aa14.2□□□□□ -0.14
MSLN-202ENST00000545450 UNC79Q9P2D8 2635 aa14.2□□□□□ -0.14
MSLN-202ENST00000545450 IGHV4-59P01825 116 aa14.2□□□□□ -0.14
MSLN-202ENST00000545450 PRR9Q5T870 116 aa14.2□□□□□ -0.14
MSLN-202ENST00000545450 Q6ZS46 218 aa14.2□□□□□ -0.14
MSLN-202ENST00000545450 MTURNQ8N3F0 131 aa14.2□□□□□ -0.14
MSLN-202ENST00000545450 LENEPQ9Y5L5 61 aa14.2□□□□□ -0.14
MSLN-202ENST00000545450 IGHV3-49A0A0A0MS15 119 aa14.19□□□□□ -0.14
MSLN-202ENST00000545450 IGHG2P01859 326 aa14.19□□□□□ -0.14
MSLN-202ENST00000545450 INSL3P51460 131 aa14.19□□□□□ -0.14
MSLN-202ENST00000545450 KLK15Q9H2R5 256 aa14.19□□□□□ -0.14
MSLN-202ENST00000545450 TLN2Q9Y4G6 2542 aa14.19□□□□□ -0.14
MSLN-202ENST00000545450 AKAP9Q99996 3911 aa14.19□□□□□ -0.14
MSLN-202ENST00000545450 FLNAP21333 2647 aaKnown RBP14.19□□□□□ -0.14
MSLN-202ENST00000545450 IGF1P05019 195 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms