RNA–Protein interactions for RNA: ENST00000544079.2

CCT4-204, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2 BASIC

Gene CCT4, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-204ENST00000544079 H3BMM0 161 aa13.88□□□□□ -0.19
CCT4-204ENST00000544079 TSHBP01222 138 aa13.88□□□□□ -0.19
CCT4-204ENST00000544079 DLX1P56177 255 aa13.88□□□□□ -0.19
CCT4-204ENST00000544079 TSPEAR-AS2P59090 65 aa13.88□□□□□ -0.19
CCT4-204ENST00000544079 UBE2WQ96B02 151 aa13.88□□□□□ -0.19
CCT4-204ENST00000544079 RPL39LQ96EH5 51 aaKnown RBP13.88□□□□□ -0.19
CCT4-204ENST00000544079 SPANXDQ9BXN6 97 aa13.88□□□□□ -0.19
CCT4-204ENST00000544079 URB1O60287 2271 aaKnown RBP13.87□□□□□ -0.19
CCT4-204ENST00000544079 TRAV2A0A0B4J234 112 aa13.87□□□□□ -0.19
CCT4-204ENST00000544079 TRBV30A0A0K0K1B3 111 aa13.87□□□□□ -0.19
CCT4-204ENST00000544079 J3QQQ9 107 aa13.87□□□□□ -0.19
CCT4-204ENST00000544079 DUSP14O95147 198 aaKnown RBP13.87□□□□□ -0.19
CCT4-204ENST00000544079 CLEC3BP05452 202 aa13.87□□□□□ -0.19
CCT4-204ENST00000544079 Q6ZQT7 251 aa13.87□□□□□ -0.19
CCT4-204ENST00000544079 RNASE6Q93091 150 aaKnown RBP13.87□□□□□ -0.19
CCT4-204ENST00000544079 DMDP11532 3685 aa13.87□□□□□ -0.19
CCT4-204ENST00000544079 ZFAND3Q9H8U3 227 aa13.87□□□□□ -0.19
CCT4-204ENST00000544079 BRI3O95415 125 aa13.86□□□□□ -0.19
CCT4-204ENST00000544079 LGALS3P17931 250 aaKnown RBP13.86□□□□□ -0.19
CCT4-204ENST00000544079 DPM3Q9P2X0 92 aa13.86□□□□□ -0.19
CCT4-204ENST00000544079 EIF4EBP3O60516 100 aaPredicted RBP13.85□□□□□ -0.19
CCT4-204ENST00000544079 ZNF292O60281 2723 aa13.85□□□□□ -0.19
CCT4-204ENST00000544079 TRBV7-7A0A0K0K1E9 115 aa13.85□□□□□ -0.19
CCT4-204ENST00000544079 LY6DQ14210 128 aa13.85□□□□□ -0.19
CCT4-204ENST00000544079 CACNA1AO00555 2505 aa13.84□□□□□ -0.19
CCT4-204ENST00000544079 H3BT86 120 aa13.84□□□□□ -0.19
CCT4-204ENST00000544079 IGHV3-23P01764 117 aa13.84□□□□□ -0.19
CCT4-204ENST00000544079 KLK9Q2XQG4 91 aa13.84□□□□□ -0.19
CCT4-204ENST00000544079 ZNF876PQ49A33 203 aa13.84□□□□□ -0.19
CCT4-204ENST00000544079 DEFB121Q5J5C9 76 aa13.84□□□□□ -0.19
CCT4-204ENST00000544079 GPHB5Q86YW7 130 aa13.84□□□□□ -0.19
CCT4-204ENST00000544079 KLK9Q9UKQ9 250 aa13.84□□□□□ -0.19
CCT4-204ENST00000544079 IGHV4OR15-8A0A075B7B6 117 aa13.84□□□□□ -0.19
CCT4-204ENST00000544079 A0A087WW49 117 aa13.84□□□□□ -0.19
CCT4-204ENST00000544079 A0A0J9YX75 114 aa13.84□□□□□ -0.19
CCT4-204ENST00000544079 LEPROTO15243 131 aa13.84□□□□□ -0.19
CCT4-204ENST00000544079 TEX49A0A1B0GTD5 131 aa13.83□□□□□ -0.2
CCT4-204ENST00000544079 PRB3Q04118 309 aaPredicted RBP13.83□□□□□ -0.2
CCT4-204ENST00000544079 TP53TG1Q9Y2A0 90 aa13.83□□□□□ -0.2
CCT4-204ENST00000544079 EP300Q09472 2414 aaPredicted RBP13.83□□□□□ -0.2
CCT4-204ENST00000544079 BSPH1Q075Z2 132 aa13.83□□□□□ -0.2
CCT4-204ENST00000544079 TMEM170BQ5T4T1 132 aa13.82□□□□□ -0.2
CCT4-204ENST00000544079 NDPQ00604 133 aa13.81□□□□□ -0.2
CCT4-204ENST00000544079 FOXC1Q12948 553 aa13.81□□□□□ -0.2
CCT4-204ENST00000544079 C1orf210Q8IVY1 113 aa13.81□□□□□ -0.2
CCT4-204ENST00000544079 C14orf178Q8N769 122 aaPredicted RBP13.81□□□□□ -0.2
CCT4-204ENST00000544079 DYNLRB1Q9NP97 96 aa13.81□□□□□ -0.2
CCT4-204ENST00000544079 VPREB3Q9UKI3 123 aa13.81□□□□□ -0.2
CCT4-204ENST00000544079 TRAV21A0A0B4J279 112 aa13.81□□□□□ -0.2
CCT4-204ENST00000544079 SDHAF1A6NFY7 115 aa13.81□□□□□ -0.2
CCT4-204ENST00000544079 PHLDA3Q9Y5J5 127 aa13.81□□□□□ -0.2
CCT4-204ENST00000544079 ZGRF1Q86YA3 2104 aa13.81□□□□□ -0.2
CCT4-204ENST00000544079 ZNRF2Q8NHG8 242 aa13.8□□□□□ -0.2
CCT4-204ENST00000544079 LINC01587Q99440 93 aa13.8□□□□□ -0.2
CCT4-204ENST00000544079 IMUPQ9GZP8 106 aa13.8□□□□□ -0.2
CCT4-204ENST00000544079 DCHS1Q96JQ0 3298 aa13.8□□□□□ -0.2
CCT4-204ENST00000544079 CLPSL1A2RUU4 121 aa13.8□□□□□ -0.2
CCT4-204ENST00000544079 MGPP08493 103 aa13.8□□□□□ -0.2
CCT4-204ENST00000544079 POLR2KP53803 58 aaKnown RBP13.8□□□□□ -0.2
CCT4-204ENST00000544079 C1orf122Q6ZSJ8 110 aa13.8□□□□□ -0.2
CCT4-204ENST00000544079 LY6G5BQ8NDX9 201 aa13.8□□□□□ -0.2
CCT4-204ENST00000544079 LINC00477Q96M19 166 aa13.8□□□□□ -0.2
CCT4-204ENST00000544079 M0R2P5 195 aa13.79□□□□□ -0.2
CCT4-204ENST00000544079 NXPH4O95158 308 aa13.79□□□□□ -0.2
CCT4-204ENST00000544079 S100A4P26447 101 aaKnown RBP13.79□□□□□ -0.2
CCT4-204ENST00000544079 C2orf82Q6UX34 121 aa13.79□□□□□ -0.2
CCT4-204ENST00000544079 MUSTN1Q8IVN3 82 aa13.79□□□□□ -0.2
CCT4-204ENST00000544079 YAE1D1Q9NRH1 226 aa13.79□□□□□ -0.2
CCT4-204ENST00000544079 OTOGLQ3ZCN5 2332 aa13.79□□□□□ -0.2
CCT4-204ENST00000544079 HES1Q14469 280 aa13.79□□□□□ -0.2
CCT4-204ENST00000544079 LPAL2Q16609 132 aa13.79□□□□□ -0.2
CCT4-204ENST00000544079 Q1RN00 199 aa13.79□□□□□ -0.2
CCT4-204ENST00000544079 PRR9Q5T870 116 aa13.79□□□□□ -0.2
CCT4-204ENST00000544079 TMEM223A0PJW6 202 aa13.78□□□□□ -0.2
CCT4-204ENST00000544079 VCYO14598 125 aa13.78□□□□□ -0.2
CCT4-204ENST00000544079 DMXL1Q9Y485 3027 aa13.78□□□□□ -0.2
CCT4-204ENST00000544079 IGHV1-69P01742 117 aa13.78□□□□□ -0.2
CCT4-204ENST00000544079 ELANEP08246 267 aa13.78□□□□□ -0.2
CCT4-204ENST00000544079 EMP1P54849 157 aa13.78□□□□□ -0.2
CCT4-204ENST00000544079 Q8N6K4 173 aa13.78□□□□□ -0.2
CCT4-204ENST00000544079 IGHV4-39P01824 125 aa13.77□□□□□ -0.21
CCT4-204ENST00000544079 U3KQE9 123 aa13.77□□□□□ -0.21
CCT4-204ENST00000544079 CEP250Q9BV73 2442 aa13.77□□□□□ -0.21
CCT4-204ENST00000544079 IGHV3OR16-8A0A075B7F1 116 aa13.76□□□□□ -0.21
CCT4-204ENST00000544079 ODF3BA8MYP8 253 aa13.76□□□□□ -0.21
CCT4-204ENST00000544079 TRIAP1O43715 76 aa13.76□□□□□ -0.21
CCT4-204ENST00000544079 C9orf139Q6ZV77 190 aa13.76□□□□□ -0.21
CCT4-204ENST00000544079 FAM110DQ8TAY7 271 aaPredicted RBP13.76□□□□□ -0.21
CCT4-204ENST00000544079 ARRDC1-AS1Q9H2J1 176 aa13.76□□□□□ -0.21
CCT4-204ENST00000544079 CELSR3Q9NYQ7 3312 aa13.76□□□□□ -0.21
CCT4-204ENST00000544079 H7C423 109 aa13.76□□□□□ -0.21
CCT4-204ENST00000544079 EBI3Q14213 229 aa13.76□□□□□ -0.21
CCT4-204ENST00000544079 ZFAND2AQ8N6M9 145 aa13.76□□□□□ -0.21
CCT4-204ENST00000544079 TMEM101Q96IK0 257 aa13.76□□□□□ -0.21
CCT4-204ENST00000544079 METTL26Q96S19 204 aa13.76□□□□□ -0.21
CCT4-204ENST00000544079 KIF25-AS1Q9Y6Z4 181 aa13.76□□□□□ -0.21
CCT4-204ENST00000544079 H7C2G1 150 aa13.75□□□□□ -0.21
CCT4-204ENST00000544079 ITLN2Q8WWU7 325 aaPredicted RBP13.75□□□□□ -0.21
CCT4-204ENST00000544079 OOSP1A8MZH6 123 aa13.74□□□□□ -0.21
CCT4-204ENST00000544079 ACYP1P07311 99 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms