RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 OR11H2Q8NH07 326 aa7.72□□□□□ -1.17
DDB1-221ENST00000543162 OR10AG1Q8NH19 301 aa7.72□□□□□ -1.17
DDB1-221ENST00000543162 TMEM263Q8WUH6 116 aaKnown RBP7.72□□□□□ -1.17
DDB1-221ENST00000543162 RNF183Q96D59 192 aa7.72□□□□□ -1.17
DDB1-221ENST00000543162 C9orf85Q96MD7 179 aa7.72□□□□□ -1.17
DDB1-221ENST00000543162 SCRT2Q9NQ03 307 aa7.72□□□□□ -1.17
DDB1-221ENST00000543162 GSN-AS1Q9NRJ2 163 aa7.72□□□□□ -1.17
DDB1-221ENST00000543162 PHLDA3Q9Y5J5 127 aa7.72□□□□□ -1.17
DDB1-221ENST00000543162 CMYA5Q8N3K9 4069 aa7.71□□□□□ -1.17
DDB1-221ENST00000543162 CACNG7P62955 275 aa7.71□□□□□ -1.18
DDB1-221ENST00000543162 WDR73Q6P4I2 378 aa7.71□□□□□ -1.18
DDB1-221ENST00000543162 ATP5L2Q7Z4Y8 100 aa7.71□□□□□ -1.18
DDB1-221ENST00000543162 C11orf72Q8NBR9 251 aa7.71□□□□□ -1.18
DDB1-221ENST00000543162 RNASE8Q8TDE3 154 aaKnown RBP7.71□□□□□ -1.18
DDB1-221ENST00000543162 C16orf74Q96GX8 76 aa7.71□□□□□ -1.18
DDB1-221ENST00000543162 FAM210BQ96KR6 192 aa7.71□□□□□ -1.18
DDB1-221ENST00000543162 TP53TG1Q9Y2A0 90 aa7.71□□□□□ -1.18
DDB1-221ENST00000543162 X6R8D5 127 aa7.71□□□□□ -1.18
DDB1-221ENST00000543162 A0A1B0GW15 77 aa7.7□□□□□ -1.18
DDB1-221ENST00000543162 COLCA2A8K830 154 aa7.7□□□□□ -1.18
DDB1-221ENST00000543162 SNURFLB1AK76 121 aa7.7□□□□□ -1.18
DDB1-221ENST00000543162 M0R381 172 aa7.7□□□□□ -1.18
DDB1-221ENST00000543162 NTF3P20783 257 aa7.7□□□□□ -1.18
DDB1-221ENST00000543162 HBBP68871 147 aa7.7□□□□□ -1.18
DDB1-221ENST00000543162 TWIST1Q15672 202 aa7.7□□□□□ -1.18
DDB1-221ENST00000543162 ZFP82Q8N141 532 aa7.7□□□□□ -1.18
DDB1-221ENST00000543162 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.7□□□□□ -1.18
DDB1-221ENST00000543162 SYT8Q8NBV8 401 aa7.7□□□□□ -1.18
DDB1-221ENST00000543162 MRAPQ8TCY5 172 aa7.7□□□□□ -1.18
DDB1-221ENST00000543162 SPXQ9BT56 116 aa7.7□□□□□ -1.18
DDB1-221ENST00000543162 CNFNQ9BYD5 112 aa7.7□□□□□ -1.18
DDB1-221ENST00000543162 IGHV4-4A0A075B6R2 117 aa7.69□□□□□ -1.18
DDB1-221ENST00000543162 A0A1B0GXF2 115 aa7.69□□□□□ -1.18
DDB1-221ENST00000543162 M0R2P5 195 aa7.69□□□□□ -1.18
DDB1-221ENST00000543162 S100A8P05109 93 aa7.69□□□□□ -1.18
DDB1-221ENST00000543162 MIFP14174 115 aa7.69□□□□□ -1.18
DDB1-221ENST00000543162 CAMPP49913 170 aa7.69□□□□□ -1.18
DDB1-221ENST00000543162 RASL11AQ6T310 242 aa7.69□□□□□ -1.18
DDB1-221ENST00000543162 SBSPONQ8IVN8 264 aa7.69□□□□□ -1.18
DDB1-221ENST00000543162 OVOL2Q9BRP0 275 aa7.69□□□□□ -1.18
DDB1-221ENST00000543162 MUC4Q99102 2169 aa7.69□□□□□ -1.18
DDB1-221ENST00000543162 NXPH4O95158 308 aa7.68□□□□□ -1.18
DDB1-221ENST00000543162 RAB5AP20339 215 aa7.68□□□□□ -1.18
DDB1-221ENST00000543162 EMP1P54849 157 aa7.68□□□□□ -1.18
DDB1-221ENST00000543162 RAB4BP61018 213 aa7.68□□□□□ -1.18
DDB1-221ENST00000543162 ZNF876PQ49A33 203 aa7.68□□□□□ -1.18
DDB1-221ENST00000543162 COX19Q49B96 90 aa7.68□□□□□ -1.18
DDB1-221ENST00000543162 DMRTA1Q5VZB9 504 aa7.68□□□□□ -1.18
DDB1-221ENST00000543162 IL17DQ8TAD2 202 aa7.68□□□□□ -1.18
DDB1-221ENST00000543162 RETNQ9HD89 108 aa7.68□□□□□ -1.18
DDB1-221ENST00000543162 MSRB1Q9NZV6 116 aa7.68□□□□□ -1.18
DDB1-221ENST00000543162 IGHV4-28A0A0C4DH34 117 aa7.67□□□□□ -1.18
DDB1-221ENST00000543162 PLAC8L1A1L4L8 177 aa7.67□□□□□ -1.18
DDB1-221ENST00000543162 TRGC1P0CF51 173 aa7.67□□□□□ -1.18
DDB1-221ENST00000543162 DAZ2Q13117 558 aaKnown RBP7.67□□□□□ -1.18
DDB1-221ENST00000543162 SMIM15Q7Z3B0 74 aa7.67□□□□□ -1.18
DDB1-221ENST00000543162 PTH2Q96A98 100 aa7.67□□□□□ -1.18
DDB1-221ENST00000543162 SPATA25Q9BR10 227 aa7.67□□□□□ -1.18
DDB1-221ENST00000543162 NOP10Q9NPE3 64 aaKnown RBP7.67□□□□□ -1.18
DDB1-221ENST00000543162 MRPL16Q9NX20 251 aaKnown RBP7.67□□□□□ -1.18
DDB1-221ENST00000543162 NBEAL2Q6ZNJ1 2754 aa7.67□□□□□ -1.18
DDB1-221ENST00000543162 TRGV1A0A0A0MS02 117 aa7.66□□□□□ -1.18
DDB1-221ENST00000543162 RPS10P46783 165 aaKnown RBP7.66□□□□□ -1.18
DDB1-221ENST00000543162 PIK3CD-AS1Q5SR53 167 aa7.66□□□□□ -1.18
DDB1-221ENST00000543162 TMEM136Q6ZRR5 245 aa7.66□□□□□ -1.18
DDB1-221ENST00000543162 Q8NAQ8 132 aa7.66□□□□□ -1.18
DDB1-221ENST00000543162 AP1S3Q96PC3 154 aa7.66□□□□□ -1.18
DDB1-221ENST00000543162 TM2D3Q9BRN9 247 aa7.66□□□□□ -1.18
DDB1-221ENST00000543162 GNB1LQ9BYB4 327 aa7.66□□□□□ -1.18
DDB1-221ENST00000543162 DNHD1Q96M86 4753 aa7.65□□□□□ -1.18
DDB1-221ENST00000543162 DEFB4AO15263 64 aa7.65□□□□□ -1.18
DDB1-221ENST00000543162 HLA-DQA1P01909 254 aa7.65□□□□□ -1.18
DDB1-221ENST00000543162 MT-ND6P03923 174 aa7.65□□□□□ -1.18
DDB1-221ENST00000543162 EVI2AP22794 236 aa7.65□□□□□ -1.18
DDB1-221ENST00000543162 DEFA6Q01524 100 aa7.65□□□□□ -1.18
DDB1-221ENST00000543162 LGALS9BQ3B8N2 356 aa7.65□□□□□ -1.18
DDB1-221ENST00000543162 Q6ZTI0 123 aa7.65□□□□□ -1.18
DDB1-221ENST00000543162 GATD1Q8NB37 220 aa7.65□□□□□ -1.18
DDB1-221ENST00000543162 RASL10AQ92737 203 aa7.65□□□□□ -1.18
DDB1-221ENST00000543162 NDUFAF3Q9BU61 184 aa7.65□□□□□ -1.18
DDB1-221ENST00000543162 TMEM191AQ9H0A3 160 aa7.65□□□□□ -1.18
DDB1-221ENST00000543162 TRAPPC1Q9Y5R8 145 aa7.65□□□□□ -1.18
DDB1-221ENST00000543162 A8MWV9 139 aa7.64□□□□□ -1.19
DDB1-221ENST00000543162 SMIM17P0DL12 118 aa7.64□□□□□ -1.19
DDB1-221ENST00000543162 C14orf178Q8N769 122 aaPredicted RBP7.64□□□□□ -1.19
DDB1-221ENST00000543162 FRZBQ92765 325 aa7.64□□□□□ -1.19
DDB1-221ENST00000543162 B9D2Q9BPU9 175 aa7.64□□□□□ -1.19
DDB1-221ENST00000543162 MRPL18Q9H0U6 180 aaKnown RBP7.64□□□□□ -1.19
DDB1-221ENST00000543162 ZMAT4Q9H898 229 aa7.64□□□□□ -1.19
DDB1-221ENST00000543162 JPT2Q9H910 190 aa7.64□□□□□ -1.19
DDB1-221ENST00000543162 DNAH3Q8TD57 4116 aa7.64□□□□□ -1.19
DDB1-221ENST00000543162 TRGV2A0A075B6R0 118 aa7.63□□□□□ -1.19
DDB1-221ENST00000543162 A0A087WWL8 130 aa7.63□□□□□ -1.19
DDB1-221ENST00000543162 GAGE12BA1L429 117 aa7.63□□□□□ -1.19
DDB1-221ENST00000543162 LYRM9A8MSI8 78 aa7.63□□□□□ -1.19
DDB1-221ENST00000543162 GAGE7O76087 117 aa7.63□□□□□ -1.19
DDB1-221ENST00000543162 APCSP02743 223 aa7.63□□□□□ -1.19
DDB1-221ENST00000543162 GAGE12FP0CL80 117 aa7.63□□□□□ -1.19
DDB1-221ENST00000543162 GAGE12GP0CL81 117 aa7.63□□□□□ -1.19
DDB1-221ENST00000543162 GAGE12IP0CL82 117 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 222.5 ms